RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 COX6CP09669 75 aa12.01□□□□□ -0.49
PCDHA11-201ENST00000398640 SUMO2P61956 95 aaKnown RBP12.01□□□□□ -0.49
PCDHA11-201ENST00000398640 C10orf128Q5T292 105 aa12.01□□□□□ -0.49
PCDHA11-201ENST00000398640 Q6ZS92 163 aa12.01□□□□□ -0.49
PCDHA11-201ENST00000398640 MRAP2Q96G30 205 aa12.01□□□□□ -0.49
PCDHA11-201ENST00000398640 AICDAQ9GZX7 198 aa12.01□□□□□ -0.49
PCDHA11-201ENST00000398640 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.01□□□□□ -0.49
PCDHA11-201ENST00000398640 PIN1P1O15428 100 aa12.01□□□□□ -0.49
PCDHA11-201ENST00000398640 RBFOX2O43251 390 aaKnown RBP eCLIP12.01□□□□□ -0.49
PCDHA11-201ENST00000398640 C1orf100Q5SVJ3 147 aa12.01□□□□□ -0.49
PCDHA11-201ENST00000398640 C8orf46Q8TAG6 207 aa12.01□□□□□ -0.49
PCDHA11-201ENST00000398640 PEMTQ9UBM1 199 aa12.01□□□□□ -0.49
PCDHA11-201ENST00000398640 ASPHD2Q6ICH7 369 aa12.01□□□□□ -0.49
PCDHA11-201ENST00000398640 ARID1AO14497 2285 aa12.01□□□□□ -0.49
PCDHA11-201ENST00000398640 CA7P43166 264 aa12.01□□□□□ -0.49
PCDHA11-201ENST00000398640 RAB9AP51151 201 aa12.01□□□□□ -0.49
PCDHA11-201ENST00000398640 UBE2DNLQ8IWF7 75 aa12.01□□□□□ -0.49
PCDHA11-201ENST00000398640 HINT1P49773 126 aaPredicted RBP12□□□□□ -0.49
PCDHA11-201ENST00000398640 ARPC1AQ92747 370 aa12□□□□□ -0.49
PCDHA11-201ENST00000398640 A0A0G2JLM5 398 aa12□□□□□ -0.49
PCDHA11-201ENST00000398640 Q0VFX4 171 aa12□□□□□ -0.49
PCDHA11-201ENST00000398640 ICAM4Q14773 271 aa12□□□□□ -0.49
PCDHA11-201ENST00000398640 BEX4Q9NWD9 120 aaPredicted RBP12□□□□□ -0.49
PCDHA11-201ENST00000398640 TMEM238LA0A1B0GVL6 79 aa12□□□□□ -0.49
PCDHA11-201ENST00000398640 A6NJY4 79 aa12□□□□□ -0.49
PCDHA11-201ENST00000398640 M0R381 172 aa12□□□□□ -0.49
PCDHA11-201ENST00000398640 RPS20P60866 119 aaKnown RBP12□□□□□ -0.49
PCDHA11-201ENST00000398640 STHQ8IWL8 128 aa12□□□□□ -0.49
PCDHA11-201ENST00000398640 ZFC3H1O60293 1989 aaKnown RBP12□□□□□ -0.49
PCDHA11-201ENST00000398640 TRGV2A0A075B6R0 118 aa12□□□□□ -0.49
PCDHA11-201ENST00000398640 TRAV40A0A0B4J280 105 aa12□□□□□ -0.49
PCDHA11-201ENST00000398640 LEPROTL1O95214 131 aa12□□□□□ -0.49
PCDHA11-201ENST00000398640 C20orf204Q6ZNR8 217 aa12□□□□□ -0.49
PCDHA11-201ENST00000398640 NRIP2Q9BQI9 281 aa12□□□□□ -0.49
PCDHA11-201ENST00000398640 EGR1P18146 543 aa12□□□□□ -0.49
PCDHA11-201ENST00000398640 TRBV20OR9-2A0A075B6H5 130 aa11.99□□□□□ -0.49
PCDHA11-201ENST00000398640 FBLIM1Q8WUP2 373 aa11.99□□□□□ -0.49
PCDHA11-201ENST00000398640 PRSS22Q9GZN4 317 aa11.99□□□□□ -0.49
PCDHA11-201ENST00000398640 C17orf100A8MU93 164 aa11.99□□□□□ -0.49
PCDHA11-201ENST00000398640 CIRBPQ14011 172 aaKnown RBP11.99□□□□□ -0.49
PCDHA11-201ENST00000398640 OR4A47Q6IF82 309 aa11.99□□□□□ -0.49
PCDHA11-201ENST00000398640 SEMA5BQ9P283 1151 aa11.99□□□□□ -0.49
PCDHA11-201ENST00000398640 PLXNA3P51805 1871 aa11.99□□□□□ -0.49
PCDHA11-201ENST00000398640 OR4D5Q8NGN0 318 aa11.99□□□□□ -0.49
PCDHA11-201ENST00000398640 PARLQ9H300 379 aa11.99□□□□□ -0.49
PCDHA11-201ENST00000398640 ANKRD36A6QL64 1941 aa11.99□□□□□ -0.49
PCDHA11-201ENST00000398640 SRIP30626 198 aa11.99□□□□□ -0.49
PCDHA11-201ENST00000398640 TMEM187Q14656 261 aa11.99□□□□□ -0.49
PCDHA11-201ENST00000398640 GTSCR1Q86UQ5 136 aa11.99□□□□□ -0.49
PCDHA11-201ENST00000398640 KIR2DL4Q99706 377 aa11.99□□□□□ -0.49
PCDHA11-201ENST00000398640 TFF1P04155 84 aa11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 TRGC1P0CF51 173 aa11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 CYP2G1PQ6ZSU1 146 aa11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 SPSB4Q96A44 273 aa11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 NLRC5Q86WI3 1866 aa11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 IGKV1D-43A0A0B4J1Z2 117 aa11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 C1QL2Q7Z5L3 287 aa11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 DMRTA2Q96SC8 542 aa11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 PRB4P10163 310 aaPredicted RBP11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 RNASE4P34096 147 aaKnown RBP11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 FHITP49789 147 aa11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 ZIC4Q8N9L1 334 aa11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 PKIAP61925 76 aa11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 CD200R1LQ6Q8B3 271 aa11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 GLMPQ8WWB7 406 aa11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 CFDP00746 253 aaPredicted RBP11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 PET117Q6UWS5 81 aa11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 ATOH7Q8N100 152 aa11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 MDS2Q8NDY4 140 aa11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 TMEM101Q96IK0 257 aa11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 TXNDC17Q9BRA2 123 aa11.98□□□□□ -0.49
PCDHA11-201ENST00000398640 FAM90A26D6RGX4 464 aa11.97□□□□□ -0.49
PCDHA11-201ENST00000398640 TCF21O43680 179 aa11.97□□□□□ -0.49
PCDHA11-201ENST00000398640 TNFRSF18Q9Y5U5 241 aa11.97□□□□□ -0.49
PCDHA11-201ENST00000398640 NPIPB13A6NJU9 1138 aa11.97□□□□□ -0.49
PCDHA11-201ENST00000398640 NPIPB4C9JG80 1138 aa11.97□□□□□ -0.49
PCDHA11-201ENST00000398640 OR13A1Q8NGR1 328 aa11.97□□□□□ -0.49
PCDHA11-201ENST00000398640 M0QZK8 103 aa11.97□□□□□ -0.49
PCDHA11-201ENST00000398640 GGCTO75223 188 aaKnown RBP11.97□□□□□ -0.49
PCDHA11-201ENST00000398640 CCL3L1P16619 93 aa11.97□□□□□ -0.49
PCDHA11-201ENST00000398640 CLDND2Q8NHS1 167 aa11.97□□□□□ -0.49
PCDHA11-201ENST00000398640 TRAV24A0A0B4J272 114 aa11.97□□□□□ -0.49
PCDHA11-201ENST00000398640 C12orf77C9JDV5 145 aa11.97□□□□□ -0.49
PCDHA11-201ENST00000398640 LINC01590Q5TEZ4 76 aa11.97□□□□□ -0.49
PCDHA11-201ENST00000398640 RTN4RL2Q86UN3 420 aa11.97□□□□□ -0.49
PCDHA11-201ENST00000398640 MRPL20Q9BYC9 149 aaKnown RBP11.97□□□□□ -0.49
PCDHA11-201ENST00000398640 HLA-DQA1P01909 254 aa11.96□□□□□ -0.49
PCDHA11-201ENST00000398640 MT-ND6P03923 174 aa11.96□□□□□ -0.49
PCDHA11-201ENST00000398640 TCF24Q7RTU0 167 aa11.96□□□□□ -0.49
PCDHA11-201ENST00000398640 MESP1Q9BRJ9 268 aa11.96□□□□□ -0.49
PCDHA11-201ENST00000398640 PRO3102Q9H379 93 aa11.96□□□□□ -0.49
PCDHA11-201ENST00000398640 IL6RP08887 468 aaPredicted RBP11.96□□□□□ -0.49
PCDHA11-201ENST00000398640 AGAP20933 346 aa11.96□□□□□ -0.49
PCDHA11-201ENST00000398640 RPS11P62280 158 aaKnown RBP eCLIP11.96□□□□□ -0.49
PCDHA11-201ENST00000398640 LDLRAD2Q5SZI1 272 aa11.96□□□□□ -0.49
PCDHA11-201ENST00000398640 WDR82Q6UXN9 313 aa11.96□□□□□ -0.49
PCDHA11-201ENST00000398640 A0A0G2JNJ9 132 aa11.96□□□□□ -0.5
PCDHA11-201ENST00000398640 GRIFINA4D1Z8 144 aa11.96□□□□□ -0.5
PCDHA11-201ENST00000398640 GCHFRP30047 84 aa11.96□□□□□ -0.5
PCDHA11-201ENST00000398640 RND3P61587 244 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 189.8 ms