RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 FGF7P21781 194 aa14.87□□□□□ -0.03
MBD1-208ENST00000398493 USF1P22415 310 aaPredicted RBP14.87□□□□□ -0.03
MBD1-208ENST00000398493 SPSB3Q6PJ21 355 aa14.87□□□□□ -0.03
MBD1-208ENST00000398493 ZNF841Q6ZN19 808 aa14.87□□□□□ -0.03
MBD1-208ENST00000398493 ETV3LQ6ZN32 361 aa14.87□□□□□ -0.03
MBD1-208ENST00000398493 FLYWCH2Q96CP2 140 aaKnown RBP14.87□□□□□ -0.03
MBD1-208ENST00000398493 PCGF1Q9BSM1 259 aa14.87□□□□□ -0.03
MBD1-208ENST00000398493 SCRT1Q9BWW7 348 aa14.87□□□□□ -0.03
MBD1-208ENST00000398493 BET1LQ9NYM9 111 aa14.87□□□□□ -0.03
MBD1-208ENST00000398493 ZNRD1Q9P1U0 126 aa14.87□□□□□ -0.03
MBD1-208ENST00000398493 RBFOX3A6NFN3 312 aa14.86□□□□□ -0.03
MBD1-208ENST00000398493 H0YJW9 148 aa14.86□□□□□ -0.03
MBD1-208ENST00000398493 KBTBD11O94819 623 aa14.86□□□□□ -0.03
MBD1-208ENST00000398493 IL6RP08887 468 aaPredicted RBP14.86□□□□□ -0.03
MBD1-208ENST00000398493 CTRB1P17538 263 aa14.86□□□□□ -0.03
MBD1-208ENST00000398493 MC5RP33032 325 aa14.86□□□□□ -0.03
MBD1-208ENST00000398493 PPT1P50897 306 aa14.86□□□□□ -0.03
MBD1-208ENST00000398493 ZNF137PP52743 207 aa14.86□□□□□ -0.03
MBD1-208ENST00000398493 TMEM177Q53S58 311 aa14.86□□□□□ -0.03
MBD1-208ENST00000398493 CTRB2Q6GPI1 263 aa14.86□□□□□ -0.03
MBD1-208ENST00000398493 PDPNQ86YL7 162 aa14.86□□□□□ -0.03
MBD1-208ENST00000398493 SLC35B3Q9H1N7 401 aa14.86□□□□□ -0.03
MBD1-208ENST00000398493 SMCO4Q9NRQ5 59 aa14.86□□□□□ -0.03
MBD1-208ENST00000398493 RPRMQ9NS64 109 aa14.86□□□□□ -0.03
MBD1-208ENST00000398493 ANK3Q12955 4377 aaKnown RBP14.86□□□□□ -0.03
MBD1-208ENST00000398493 HIVEP1P15822 2718 aa14.85□□□□□ -0.03
MBD1-208ENST00000398493 PPIAL4CA0A0B4J2A2 164 aa14.85□□□□□ -0.03
MBD1-208ENST00000398493 SOX15O60248 233 aa14.85□□□□□ -0.03
MBD1-208ENST00000398493 PPIAL4GP0DN37 164 aa14.85□□□□□ -0.03
MBD1-208ENST00000398493 NPBWR1P48145 328 aa14.85□□□□□ -0.03
MBD1-208ENST00000398493 RAB13P51153 203 aa14.85□□□□□ -0.03
MBD1-208ENST00000398493 TGIF2LXQ8IUE1 241 aa14.85□□□□□ -0.03
MBD1-208ENST00000398493 OR4C13Q8NGP0 309 aa14.85□□□□□ -0.03
MBD1-208ENST00000398493 VSTM2AQ8TAG5 236 aa14.85□□□□□ -0.03
MBD1-208ENST00000398493 C8orf46Q8TAG6 207 aa14.85□□□□□ -0.03
MBD1-208ENST00000398493 MBD3L1Q8WWY6 194 aa14.85□□□□□ -0.03
MBD1-208ENST00000398493 NABP2Q9BQ15 211 aa14.85□□□□□ -0.03
MBD1-208ENST00000398493 PATZ1Q9HBE1 687 aaKnown RBP14.85□□□□□ -0.03
MBD1-208ENST00000398493 IGHV2-5P01817 119 aa14.85□□□□□ -0.03
MBD1-208ENST00000398493 IGKV1-16P04430 117 aa14.85□□□□□ -0.03
MBD1-208ENST00000398493 IFNA4P05014 189 aa14.85□□□□□ -0.03
MBD1-208ENST00000398493 CD1BP29016 333 aa14.85□□□□□ -0.03
MBD1-208ENST00000398493 ATP5IP56385 69 aaPredicted RBP14.85□□□□□ -0.03
MBD1-208ENST00000398493 LOXL1Q08397 574 aaPredicted RBP14.85□□□□□ -0.03
MBD1-208ENST00000398493 HARBI1Q96MB7 349 aa14.85□□□□□ -0.03
MBD1-208ENST00000398493 SMAD7O15105 426 aaKnown RBP14.84□□□□□ -0.03
MBD1-208ENST00000398493 MPDU1O75352 247 aa14.84□□□□□ -0.03
MBD1-208ENST00000398493 RPS16P62249 146 aaKnown RBP14.84□□□□□ -0.03
MBD1-208ENST00000398493 CCL20P78556 96 aa14.84□□□□□ -0.03
MBD1-208ENST00000398493 DLK1P80370 383 aa14.84□□□□□ -0.03
MBD1-208ENST00000398493 SMUG1Q53HV7 270 aa14.84□□□□□ -0.03
MBD1-208ENST00000398493 WDR25Q64LD2 544 aaPredicted RBP14.84□□□□□ -0.03
MBD1-208ENST00000398493 C11orf42Q8N5U0 333 aa14.84□□□□□ -0.03
MBD1-208ENST00000398493 OR5B3Q8NH48 314 aa14.84□□□□□ -0.03
MBD1-208ENST00000398493 OR4A5Q8NH83 315 aa14.84□□□□□ -0.03
MBD1-208ENST00000398493 ST6GALNAC6Q969X2 333 aa14.84□□□□□ -0.03
MBD1-208ENST00000398493 WASHC3Q9Y3C0 194 aa14.84□□□□□ -0.03
MBD1-208ENST00000398493 ABCA2Q9BZC7 2435 aa14.84□□□□□ -0.03
MBD1-208ENST00000398493 CSPG4Q6UVK1 2322 aa14.83□□□□□ -0.03
MBD1-208ENST00000398493 C9JQL5 133 aa14.83□□□□□ -0.04
MBD1-208ENST00000398493 SPNS3Q6ZMD2 512 aa14.83□□□□□ -0.04
MBD1-208ENST00000398493 HINT2Q9BX68 163 aa14.83□□□□□ -0.04
MBD1-208ENST00000398493 TUBA4BQ9H853 241 aa14.83□□□□□ -0.04
MBD1-208ENST00000398493 PLEKHA3Q9HB20 300 aa14.83□□□□□ -0.04
MBD1-208ENST00000398493 SLC39A9Q9NUM3 307 aa14.83□□□□□ -0.04
MBD1-208ENST00000398493 MALRD1Q5VYJ5 2156 aa14.83□□□□□ -0.04
MBD1-208ENST00000398493 SRRM4A7MD48 611 aaKnown RBP14.82□□□□□ -0.04
MBD1-208ENST00000398493 LIPFP07098 398 aa14.82□□□□□ -0.04
MBD1-208ENST00000398493 SAA1P0DJI8 122 aaPredicted RBP14.82□□□□□ -0.04
MBD1-208ENST00000398493 NPY1RP25929 384 aa14.82□□□□□ -0.04
MBD1-208ENST00000398493 REG1BP48304 166 aa14.82□□□□□ -0.04
MBD1-208ENST00000398493 ELLP55199 621 aaPredicted RBP14.82□□□□□ -0.04
MBD1-208ENST00000398493 PRCDQ00LT1 54 aa14.82□□□□□ -0.04
MBD1-208ENST00000398493 TMEM88Q6PEY1 159 aa14.82□□□□□ -0.04
MBD1-208ENST00000398493 C15orf54Q8N8G6 183 aa14.82□□□□□ -0.04
MBD1-208ENST00000398493 SLC24A4Q8NFF2 622 aa14.82□□□□□ -0.04
MBD1-208ENST00000398493 NPCDR1Q9BY65 106 aa14.82□□□□□ -0.04
MBD1-208ENST00000398493 VSIRQ9H7M9 311 aa14.82□□□□□ -0.04
MBD1-208ENST00000398493 WDR83OSQ9Y284 106 aa14.82□□□□□ -0.04
MBD1-208ENST00000398493 CR1P17927 2039 aa14.82□□□□□ -0.04
MBD1-208ENST00000398493 RRHO14718 337 aa14.82□□□□□ -0.04
MBD1-208ENST00000398493 MDKP21741 143 aaPredicted RBP14.82□□□□□ -0.04
MBD1-208ENST00000398493 ZFP36P26651 326 aaKnown RBP14.82□□□□□ -0.04
MBD1-208ENST00000398493 RHEBQ15382 184 aa14.82□□□□□ -0.04
MBD1-208ENST00000398493 CBLN2Q8IUK8 224 aa14.82□□□□□ -0.04
MBD1-208ENST00000398493 CLEC7AQ9BXN2 247 aa14.82□□□□□ -0.04
MBD1-208ENST00000398493 AMMECR1Q9Y4X0 333 aaPredicted RBP14.82□□□□□ -0.04
MBD1-208ENST00000398493 IGHV2-26A0A0B4J1V2 119 aa14.81□□□□□ -0.04
MBD1-208ENST00000398493 SMCO3A2RU48 225 aa14.81□□□□□ -0.04
MBD1-208ENST00000398493 LGALS7P47929 136 aa14.81□□□□□ -0.04
MBD1-208ENST00000398493 KHDC3LQ587J8 217 aa14.81□□□□□ -0.04
MBD1-208ENST00000398493 ZNF506Q5JVG8 444 aa14.81□□□□□ -0.04
MBD1-208ENST00000398493 FFAR4Q5NUL3 377 aa14.81□□□□□ -0.04
MBD1-208ENST00000398493 RCC1LQ96I51 464 aaKnown RBP14.81□□□□□ -0.04
MBD1-208ENST00000398493 COMMD5Q9GZQ3 224 aa14.81□□□□□ -0.04
MBD1-208ENST00000398493 ARHGAP32A7KAX9 2087 aa14.81□□□□□ -0.04
MBD1-208ENST00000398493 TEX50A0A1B0GTY4 177 aa14.8□□□□□ -0.04
MBD1-208ENST00000398493 IFNA1P01562 189 aa14.8□□□□□ -0.04
MBD1-208ENST00000398493 HAGHQ16775 308 aa14.8□□□□□ -0.04
MBD1-208ENST00000398493 TMEM249Q2WGJ8 235 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms