RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 MRPL27Q9P0M9 148 aaKnown RBP0.95□□□□□ -2.26
CD47-203ENST00000398258 VPS29Q9UBQ0 182 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 FUT9Q9Y231 359 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 PKIGQ9Y2B9 76 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 MALRD1Q5VYJ5 2156 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 NCKAP5O14513 1909 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 FLT4P35916 1363 aa0.95□□□□□ -2.26
CD47-203ENST00000398258 ZFHX2Q9C0A1 2572 aaPredicted RBP0.94□□□□□ -2.26
CD47-203ENST00000398258 TRBV20OR9-2A0A075B6H5 130 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 TRAV38-1A0A0B4J264 116 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 A0A0D9SEW6 157 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 PQLC2LA1A4F0 135 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 IRGMA1A4Y4 181 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 GOLGA6L19H0YKK7 550 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 TRAPPC2LH3BP13 241 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 RPP14O95059 124 aaKnown RBP0.94□□□□□ -2.26
CD47-203ENST00000398258 IGHV3-7P01780 117 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 SULT1A3P0DMM9 295 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 SULT1A4P0DMN0 295 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 CD79AP11912 226 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 DEFA4P12838 97 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 MSNP26038 577 aaKnown RBP0.94□□□□□ -2.26
CD47-203ENST00000398258 CDKN2CP42773 168 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 ZNF80P51504 273 aaPredicted RBP0.94□□□□□ -2.26
CD47-203ENST00000398258 DEFA1P59665 94 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 TMEM258P61165 79 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 PSME3P61289 254 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 LSM6P62312 80 aaKnown RBP0.94□□□□□ -2.26
CD47-203ENST00000398258 RANP62826 216 aaKnown RBP0.94□□□□□ -2.26
CD47-203ENST00000398258 RPL18Q07020 188 aaKnown RBP0.94□□□□□ -2.26
CD47-203ENST00000398258 AESQ08117 197 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 Q6ZS49 121 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 C9orf163Q8N9P6 203 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 ERMAPQ96PL5 475 aaPredicted RBP0.94□□□□□ -2.26
CD47-203ENST00000398258 EFCAB1Q9HAE3 211 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 C8orf4Q9NR00 106 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 PAQR5Q9NXK6 330 aaPredicted RBP0.94□□□□□ -2.26
CD47-203ENST00000398258 IL36BQ9NZH7 164 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 DOK5Q9P104 306 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 TIMM22Q9Y584 194 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 NUP155O75694 1391 aa0.94□□□□□ -2.26
CD47-203ENST00000398258 RGS12O14924 1447 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 WRNQ14191 1432 aaPredicted RBP eCLIP0.93□□□□□ -2.26
CD47-203ENST00000398258 MEIKINA0A087WXM9 373 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 TRBV10-2A0A0K0K1G8 114 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 CLDN24A6NM45 220 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 SIGLEC16A6NMB1 481 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 F8W036 122 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 ZNF737O75373 536 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 TTRP02766 147 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 TCRBP04435 133 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 PRM2P04554 102 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 ZNF705DP0CH99 300 aaPredicted RBP0.93□□□□□ -2.26
CD47-203ENST00000398258 ZNF705BP0CI00 300 aaPredicted RBP0.93□□□□□ -2.26
CD47-203ENST00000398258 NFYAP23511 347 aaPredicted RBP0.93□□□□□ -2.26
CD47-203ENST00000398258 HLA-DMBP28068 263 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 HAAOP46952 286 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 OMPP47874 163 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 FXYD2P54710 66 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 SNRPD2P62316 118 aaKnown RBP0.93□□□□□ -2.26
CD47-203ENST00000398258 CCL7P80098 99 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 GRK1Q15835 563 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 KCNJ8Q15842 424 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 FAM27BQ5VT28 67 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 ZNF705AQ6ZN79 300 aaPredicted RBP0.93□□□□□ -2.26
CD47-203ENST00000398258 COA5Q86WW8 74 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 LRRC28Q86X40 367 aaPredicted RBP0.93□□□□□ -2.26
CD47-203ENST00000398258 CLDN22Q8N7P3 220 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 OR8B12Q8NGG6 310 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 OR13C4Q8NGS5 318 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 ZNF563Q8TA94 476 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 MRPL30Q8TCC3 161 aaKnown RBP0.93□□□□□ -2.26
CD47-203ENST00000398258 ACOT12Q8WYK0 555 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 DGCR14Q96DF8 476 aaKnown RBP0.93□□□□□ -2.26
CD47-203ENST00000398258 C8orf76Q96K31 380 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 TSPAN32Q96QS1 320 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 ULBP3Q9BZM4 244 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 C20orf27Q9GZN8 174 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 WDR61Q9GZS3 305 aaKnown RBP0.93□□□□□ -2.26
CD47-203ENST00000398258 CYSTM1Q9H1C7 97 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 NAT8Q9UHE5 227 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 MTUS2Q5JR59 1369 aa0.93□□□□□ -2.26
CD47-203ENST00000398258 NEO1Q92859 1461 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 NUMA1Q14980 2115 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 PRRC2BQ5JSZ5 2229 aaKnown RBP0.92□□□□□ -2.26
CD47-203ENST00000398258 ZFYVE9O95405 1425 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 NCOA1Q15788 1441 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 COL4A1P02462 1669 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 A0A087WUJ7 227 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 MEIS3P1A6NDR6 274 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 GGT3PA6NGU5 568 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 HMSDA8MTL9 139 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 TMEM114B3SHH9 223 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 PSMD12O00232 456 aaPredicted RBP0.92□□□□□ -2.26
CD47-203ENST00000398258 IGKV1-5P01602 117 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 HLA-DRB1P01911 266 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 PPBPP02775 128 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 CLPSP04118 112 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 GPX1P07203 203 aa0.92□□□□□ -2.26
CD47-203ENST00000398258 G6PCP35575 357 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms