RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 ARPC1AQ92747 370 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 ERG28Q9UKR5 140 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 IL6RP08887 468 aaPredicted RBP10.48□□□□□ -0.73
SMU1-201ENST00000397149 C9orf40Q8IXQ3 194 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 KLF14Q8TD94 323 aaPredicted RBP10.48□□□□□ -0.73
SMU1-201ENST00000397149 ZNF703Q9H7S9 590 aaPredicted RBP10.48□□□□□ -0.73
SMU1-201ENST00000397149 TMEM30AQ9NV96 361 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 IGFBP2P18065 325 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 ORMDL3Q8N138 153 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 NPIPB13A6NJU9 1138 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 NPIPB5A8MRT5 1133 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 ZFAND6Q6FIF0 208 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 C5orf30Q96GV9 206 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 PRADC1Q9BSG0 188 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 GGACTQ9BVM4 153 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 GP6Q9HCN6 339 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 C21orf62Q9NYP8 219 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 TRAV25A0A0B4J276 109 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 SFXN3Q9BWM7 321 aa10.48□□□□□ -0.73
SMU1-201ENST00000397149 SIRT4Q9Y6E7 314 aaPredicted RBP10.48□□□□□ -0.73
SMU1-201ENST00000397149 TRAV8-3A0A0A6YYJ7 113 aa10.47□□□□□ -0.73
SMU1-201ENST00000397149 PAX1P15863 534 aa10.47□□□□□ -0.73
SMU1-201ENST00000397149 MRPL32Q9BYC8 188 aaKnown RBP10.47□□□□□ -0.73
SMU1-201ENST00000397149 AKAP6Q13023 2319 aa10.47□□□□□ -0.73
SMU1-201ENST00000397149 AHRRA9YTQ3 701 aa10.47□□□□□ -0.73
SMU1-201ENST00000397149 P2RY6Q15077 328 aa10.47□□□□□ -0.73
SMU1-201ENST00000397149 RSPO4Q2I0M5 234 aaPredicted RBP10.47□□□□□ -0.73
SMU1-201ENST00000397149 HS3ST3B1Q9Y662 390 aa10.47□□□□□ -0.73
SMU1-201ENST00000397149 FXYD1O00168 92 aa10.47□□□□□ -0.73
SMU1-201ENST00000397149 HMGCLL1Q8TB92 370 aa10.47□□□□□ -0.73
SMU1-201ENST00000397149 EPDR1Q9UM22 224 aa10.47□□□□□ -0.73
SMU1-201ENST00000397149 NUP188Q5SRE5 1749 aa10.47□□□□□ -0.73
SMU1-201ENST00000397149 TMEM8BA6NDV4 472 aa10.46□□□□□ -0.73
SMU1-201ENST00000397149 ZNF146Q15072 292 aa10.46□□□□□ -0.73
SMU1-201ENST00000397149 C6orf226Q5I0X4 101 aa10.46□□□□□ -0.73
SMU1-201ENST00000397149 CD5LO43866 347 aa10.46□□□□□ -0.73
SMU1-201ENST00000397149 TMEM54Q969K7 222 aa10.46□□□□□ -0.73
SMU1-201ENST00000397149 MDS2Q8NDY4 140 aa10.46□□□□□ -0.73
SMU1-201ENST00000397149 MIXL1Q9H2W2 232 aa10.46□□□□□ -0.73
SMU1-201ENST00000397149 Q9H3A6 140 aa10.46□□□□□ -0.73
SMU1-201ENST00000397149 V9GYH0 126 aa10.46□□□□□ -0.73
SMU1-201ENST00000397149 TRBV9A0A0B4J1U6 114 aa10.46□□□□□ -0.74
SMU1-201ENST00000397149 A0A1W2PQD3 144 aa10.46□□□□□ -0.74
SMU1-201ENST00000397149 MRPL52Q86TS9 123 aaKnown RBP10.46□□□□□ -0.74
SMU1-201ENST00000397149 RPP21Q9H633 154 aaKnown RBP10.46□□□□□ -0.74
SMU1-201ENST00000397149 KCNE1BA0A087WTH5 132 aa10.46□□□□□ -0.74
SMU1-201ENST00000397149 LILRA1O75019 489 aa10.46□□□□□ -0.74
SMU1-201ENST00000397149 PTP4A3O75365 173 aa10.46□□□□□ -0.74
SMU1-201ENST00000397149 SNHG12Q9BXW3 62 aa10.46□□□□□ -0.74
SMU1-201ENST00000397149 METRNQ9UJH8 293 aa10.46□□□□□ -0.74
SMU1-201ENST00000397149 DTX4Q9Y2E6 619 aa10.46□□□□□ -0.74
SMU1-201ENST00000397149 ISXQ2M1V0 245 aa10.45□□□□□ -0.74
SMU1-201ENST00000397149 CHD2O14647 1828 aaKnown RBP10.45□□□□□ -0.74
SMU1-201ENST00000397149 MSGN1A6NI15 193 aa10.45□□□□□ -0.74
SMU1-201ENST00000397149 SCRT1Q9BWW7 348 aa10.45□□□□□ -0.74
SMU1-201ENST00000397149 DOT1LQ8TEK3 1739 aa10.45□□□□□ -0.74
SMU1-201ENST00000397149 TRAV5A0A0B4J249 113 aa10.45□□□□□ -0.74
SMU1-201ENST00000397149 TFF3Q07654 80 aa10.45□□□□□ -0.74
SMU1-201ENST00000397149 PSMG4Q5JS54 123 aa10.45□□□□□ -0.74
SMU1-201ENST00000397149 MORN3Q6PF18 240 aaPredicted RBP10.45□□□□□ -0.74
SMU1-201ENST00000397149 CACNA1DQ01668 2161 aa10.45□□□□□ -0.74
SMU1-201ENST00000397149 TRGV1A0A0A0MS02 117 aa10.45□□□□□ -0.74
SMU1-201ENST00000397149 HIGD1CA8MV81 97 aa10.45□□□□□ -0.74
SMU1-201ENST00000397149 DPM2O94777 84 aa10.45□□□□□ -0.74
SMU1-201ENST00000397149 CRYGNQ8WXF5 182 aa10.45□□□□□ -0.74
SMU1-201ENST00000397149 OTOFQ9HC10 1997 aa10.45□□□□□ -0.74
SMU1-201ENST00000397149 CDCP2Q5VXM1 449 aa10.45□□□□□ -0.74
SMU1-201ENST00000397149 OR52E5Q8NH55 327 aa10.45□□□□□ -0.74
SMU1-201ENST00000397149 UBE2E2Q96LR5 201 aa10.45□□□□□ -0.74
SMU1-201ENST00000397149 EFEMP2O95967 443 aa10.45□□□□□ -0.74
SMU1-201ENST00000397149 ZNF474Q6S9Z5 364 aaPredicted RBP10.45□□□□□ -0.74
SMU1-201ENST00000397149 DOCK10Q96BY6 2186 aa10.44□□□□□ -0.74
SMU1-201ENST00000397149 SRSF1Q07955 248 aaKnown RBP eCLIP10.44□□□□□ -0.74
SMU1-201ENST00000397149 SEC16AO15027 2179 aa10.44□□□□□ -0.74
SMU1-201ENST00000397149 NANOS3P60323 173 aaKnown RBP10.44□□□□□ -0.74
SMU1-201ENST00000397149 FOXL1Q12952 345 aa10.44□□□□□ -0.74
SMU1-201ENST00000397149 MAJINQ3KP22 176 aa10.44□□□□□ -0.74
SMU1-201ENST00000397149 FAM57AQ8TBR7 257 aa10.44□□□□□ -0.74
SMU1-201ENST00000397149 HIST1H2BAQ96A08 127 aa10.44□□□□□ -0.74
SMU1-201ENST00000397149 RNASE7Q9H1E1 156 aaKnown RBP10.44□□□□□ -0.74
SMU1-201ENST00000397149 ZNFX1Q9P2E3 1918 aaKnown RBP10.44□□□□□ -0.74
SMU1-201ENST00000397149 C19orf24Q9BVV8 132 aa10.44□□□□□ -0.74
SMU1-201ENST00000397149 SLX4Q8IY92 1834 aa10.44□□□□□ -0.74
SMU1-201ENST00000397149 C2orf82Q6UX34 121 aa10.44□□□□□ -0.74
SMU1-201ENST00000397149 TRAV12-1A0A0B4J245 112 aa10.43□□□□□ -0.74
SMU1-201ENST00000397149 FAM27E3Q08E93 113 aa10.43□□□□□ -0.74
SMU1-201ENST00000397149 LCNL1Q6ZST4 164 aa10.43□□□□□ -0.74
SMU1-201ENST00000397149 DPM3Q9P2X0 92 aa10.43□□□□□ -0.74
SMU1-201ENST00000397149 ATP5G3P48201 142 aa10.43□□□□□ -0.74
SMU1-201ENST00000397149 C2orf68Q2NKX9 166 aa10.43□□□□□ -0.74
SMU1-201ENST00000397149 GAGE13Q4V321 117 aa10.43□□□□□ -0.74
SMU1-201ENST00000397149 TCTEX1D4Q5JR98 221 aa10.43□□□□□ -0.74
SMU1-201ENST00000397149 IL36BQ9NZH7 164 aa10.43□□□□□ -0.74
SMU1-201ENST00000397149 JPT1Q9UK76 154 aa10.43□□□□□ -0.74
SMU1-201ENST00000397149 IFNL4K9M1U5 179 aa10.43□□□□□ -0.74
SMU1-201ENST00000397149 APOBEC3AP31941 199 aaPredicted RBP10.43□□□□□ -0.74
SMU1-201ENST00000397149 CA7P43166 264 aa10.43□□□□□ -0.74
SMU1-201ENST00000397149 GTSF1LQ9H1H1 148 aa10.43□□□□□ -0.74
SMU1-201ENST00000397149 CRIM1Q9NZV1 1036 aa10.43□□□□□ -0.74
SMU1-201ENST00000397149 DRAM1Q8N682 238 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms