RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 FOXE3Q13461 319 aa16.73■□□□□ 0.27
FXN-202ENST00000396364 ZNF329Q86UD4 541 aa16.73■□□□□ 0.27
FXN-202ENST00000396364 MINDY2Q8NBR6 621 aa16.73■□□□□ 0.27
FXN-202ENST00000396364 OR52E5Q8NH55 327 aa16.73■□□□□ 0.27
FXN-202ENST00000396364 OR1S1Q8NH92 325 aa16.73■□□□□ 0.27
FXN-202ENST00000396364 MDFIQ99750 246 aa16.73■□□□□ 0.27
FXN-202ENST00000396364 ZNF747Q9BV97 191 aa16.73■□□□□ 0.27
FXN-202ENST00000396364 A0A0B4J293 547 aa16.72■□□□□ 0.27
FXN-202ENST00000396364 A0A0G2JRQ6 117 aa16.72■□□□□ 0.27
FXN-202ENST00000396364 PPIFP30405 207 aaKnown RBP16.72■□□□□ 0.27
FXN-202ENST00000396364 PRCDQ00LT1 54 aa16.72■□□□□ 0.27
FXN-202ENST00000396364 CFHR3Q02985 330 aa16.72■□□□□ 0.27
FXN-202ENST00000396364 IZUMO4Q1ZYL8 232 aa16.72■□□□□ 0.27
FXN-202ENST00000396364 SHISA2Q6UWI4 295 aa16.72■□□□□ 0.27
FXN-202ENST00000396364 UXS1Q8NBZ7 420 aa16.72■□□□□ 0.27
FXN-202ENST00000396364 FAM110DQ8TAY7 271 aaPredicted RBP16.72■□□□□ 0.27
FXN-202ENST00000396364 SLA2Q9H6Q3 261 aa16.72■□□□□ 0.27
FXN-202ENST00000396364 PLEKHA3Q9HB20 300 aa16.72■□□□□ 0.27
FXN-202ENST00000396364 NDUFA4L2Q9NRX3 87 aa16.72■□□□□ 0.27
FXN-202ENST00000396364 ZNF355PQ9NSJ1 428 aa16.72■□□□□ 0.27
FXN-202ENST00000396364 FBN1P35555 2871 aaKnown RBP16.72■□□□□ 0.27
FXN-202ENST00000396364 NPIPB5A8MRT5 1133 aa16.71■□□□□ 0.27
FXN-202ENST00000396364 ST8SIA3O43173 380 aa16.71■□□□□ 0.27
FXN-202ENST00000396364 PF4V1P10720 104 aa16.71■□□□□ 0.27
FXN-202ENST00000396364 SPCS3P61009 180 aa16.71■□□□□ 0.27
FXN-202ENST00000396364 ERHP84090 104 aaKnown RBP16.71■□□□□ 0.27
FXN-202ENST00000396364 C19orf54Q5BKX5 351 aa16.71■□□□□ 0.27
FXN-202ENST00000396364 GGNBP1Q5YKI7 109 aa16.71■□□□□ 0.27
FXN-202ENST00000396364 TTC9CQ8N5M4 171 aa16.71■□□□□ 0.27
FXN-202ENST00000396364 WIPF2Q8TF74 440 aaPredicted RBP16.71■□□□□ 0.27
FXN-202ENST00000396364 HMX3A6NHT5 357 aa16.7■□□□□ 0.26
FXN-202ENST00000396364 TEX22C9J3V5 150 aa16.7■□□□□ 0.26
FXN-202ENST00000396364 APELAP0DMC3 54 aa16.7■□□□□ 0.26
FXN-202ENST00000396364 DEFA4P12838 97 aa16.7■□□□□ 0.26
FXN-202ENST00000396364 AARDQ4LEZ3 155 aa16.7■□□□□ 0.26
FXN-202ENST00000396364 OR5T1Q8NG75 326 aa16.7■□□□□ 0.26
FXN-202ENST00000396364 ZFP57Q9NU63 452 aa16.7■□□□□ 0.26
FXN-202ENST00000396364 TCRBV4S1A1TA0A5B7 111 aa16.69■□□□□ 0.26
FXN-202ENST00000396364 FAM90A26D6RGX4 464 aa16.69■□□□□ 0.26
FXN-202ENST00000396364 IGLV1-40P01703 118 aa16.69■□□□□ 0.26
FXN-202ENST00000396364 MYOD1P15172 320 aa16.69■□□□□ 0.26
FXN-202ENST00000396364 SPNP16150 400 aa16.69■□□□□ 0.26
FXN-202ENST00000396364 PSMB6P28072 239 aa16.69■□□□□ 0.26
FXN-202ENST00000396364 HOXA1P49639 335 aaPredicted RBP16.69■□□□□ 0.26
FXN-202ENST00000396364 KHDC1LQ5JSQ8 128 aa16.69■□□□□ 0.26
FXN-202ENST00000396364 Q6ZRM9 215 aa16.69■□□□□ 0.26
FXN-202ENST00000396364 OR1L6Q8NGR2 347 aa16.69■□□□□ 0.26
FXN-202ENST00000396364 DBX1A6NMT0 343 aa16.68■□□□□ 0.26
FXN-202ENST00000396364 E7EUB6 86 aa16.68■□□□□ 0.26
FXN-202ENST00000396364 MED6O75586 246 aa16.68■□□□□ 0.26
FXN-202ENST00000396364 ADAP1O75689 374 aa16.68■□□□□ 0.26
FXN-202ENST00000396364 BRI3O95415 125 aa16.68■□□□□ 0.26
FXN-202ENST00000396364 OR13C7P0DN81 318 aa16.68■□□□□ 0.26
FXN-202ENST00000396364 HIST1H1BP16401 226 aaKnown RBP16.68■□□□□ 0.26
FXN-202ENST00000396364 PSMB8P28062 276 aa16.68■□□□□ 0.26
FXN-202ENST00000396364 TATDN3Q17R31 274 aa16.68■□□□□ 0.26
FXN-202ENST00000396364 ASPHD1Q5U4P2 390 aa16.68■□□□□ 0.26
FXN-202ENST00000396364 RNF152Q8N8N0 203 aa16.68■□□□□ 0.26
FXN-202ENST00000396364 SPATA3Q8NHX4 192 aa16.68■□□□□ 0.26
FXN-202ENST00000396364 CITED1Q99966 193 aa16.68■□□□□ 0.26
FXN-202ENST00000396364 THYN1Q9P016 225 aa16.68■□□□□ 0.26
FXN-202ENST00000396364 TSSC4Q9Y5U2 329 aaPredicted RBP16.68■□□□□ 0.26
FXN-202ENST00000396364 COL6A5A8TX70 2615 aa16.68■□□□□ 0.26
FXN-202ENST00000396364 A0A0G2JLM5 398 aa16.67■□□□□ 0.26
FXN-202ENST00000396364 IGLC7A0M8Q6 106 aa16.67■□□□□ 0.26
FXN-202ENST00000396364 CEBPZOSA8MTT3 80 aa16.67■□□□□ 0.26
FXN-202ENST00000396364 SSNA1O43805 119 aa16.67■□□□□ 0.26
FXN-202ENST00000396364 TRGV3P03979 118 aa16.67■□□□□ 0.26
FXN-202ENST00000396364 CRYGCP07315 174 aa16.67■□□□□ 0.26
FXN-202ENST00000396364 CD28P10747 220 aa16.67■□□□□ 0.26
FXN-202ENST00000396364 SNCAP37840 140 aa16.67■□□□□ 0.26
FXN-202ENST00000396364 RAB9AP51151 201 aa16.67■□□□□ 0.26
FXN-202ENST00000396364 SUB1P53999 127 aaKnown RBP eCLIP16.67■□□□□ 0.26
FXN-202ENST00000396364 OXA1LQ15070 435 aa16.67■□□□□ 0.26
FXN-202ENST00000396364 PDLIM3Q53GG5 364 aaPredicted RBP16.67■□□□□ 0.26
FXN-202ENST00000396364 C11orf44Q8N8P7 122 aa16.67■□□□□ 0.26
FXN-202ENST00000396364 HIPK2Q9H2X6 1198 aa16.67■□□□□ 0.26
FXN-202ENST00000396364 TET2Q6N021 2002 aaPredicted RBP16.67■□□□□ 0.26
FXN-202ENST00000396364 C5orf51A6NDU8 294 aa16.66■□□□□ 0.26
FXN-202ENST00000396364 CGB1A6NKQ9 187 aa16.66■□□□□ 0.26
FXN-202ENST00000396364 INS-IGF2F8WCM5 200 aa16.66■□□□□ 0.26
FXN-202ENST00000396364 LY86O95711 162 aa16.66■□□□□ 0.26
FXN-202ENST00000396364 AREGP15514 252 aa16.66■□□□□ 0.26
FXN-202ENST00000396364 CTRB1P17538 263 aa16.66■□□□□ 0.26
FXN-202ENST00000396364 TPPP2P59282 170 aa16.66■□□□□ 0.26
FXN-202ENST00000396364 CD83Q01151 205 aa16.66■□□□□ 0.26
FXN-202ENST00000396364 TNFRSF9Q07011 255 aa16.66■□□□□ 0.26
FXN-202ENST00000396364 CTRB2Q6GPI1 263 aa16.66■□□□□ 0.26
FXN-202ENST00000396364 C10orf99Q6UWK7 81 aa16.66■□□□□ 0.26
FXN-202ENST00000396364 GSG1LQ6UXU4 331 aa16.66■□□□□ 0.26
FXN-202ENST00000396364 OR10W1Q8NGF6 305 aa16.66■□□□□ 0.26
FXN-202ENST00000396364 HSPB7Q9UBY9 170 aa16.66■□□□□ 0.26
FXN-202ENST00000396364 C13orf42A0A1B0GVH6 325 aa16.65■□□□□ 0.26
FXN-202ENST00000396364 A0A1B0GW64 132 aa16.65■□□□□ 0.26
FXN-202ENST00000396364 FAM25EA8MYX2 175 aa16.65■□□□□ 0.26
FXN-202ENST00000396364 WRBO00258 174 aa16.65■□□□□ 0.26
FXN-202ENST00000396364 IAH1Q2TAA2 248 aaPredicted RBP16.65■□□□□ 0.26
FXN-202ENST00000396364 NDUFA11Q86Y39 141 aa16.65■□□□□ 0.26
FXN-202ENST00000396364 USMG5Q96IX5 58 aa16.65■□□□□ 0.26
FXN-202ENST00000396364 CITED2Q99967 270 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms