RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 ZNF585BQ52M93 769 aa13.52□□□□□ -0.25
CXCL12-204ENST00000395793 BTNL8Q6UX41 500 aa13.52□□□□□ -0.25
CXCL12-204ENST00000395793 CD300LFQ8TDQ1 290 aa13.52□□□□□ -0.25
CXCL12-204ENST00000395793 FCAMRQ8WWV6 532 aa13.52□□□□□ -0.25
CXCL12-204ENST00000395793 CXorf58Q96LI9 332 aa13.52□□□□□ -0.25
CXCL12-204ENST00000395793 SRSF8Q9BRL6 282 aaKnown RBP13.52□□□□□ -0.25
CXCL12-204ENST00000395793 MARCH11A6NNE9 402 aa13.51□□□□□ -0.25
CXCL12-204ENST00000395793 IFNA6P05013 189 aa13.51□□□□□ -0.25
CXCL12-204ENST00000395793 FGF2P09038 288 aa13.51□□□□□ -0.25
CXCL12-204ENST00000395793 F2RP25116 425 aa13.51□□□□□ -0.25
CXCL12-204ENST00000395793 LPAR6P43657 344 aa13.51□□□□□ -0.25
CXCL12-204ENST00000395793 ZNF57Q68EA5 555 aaPredicted RBP13.51□□□□□ -0.25
CXCL12-204ENST00000395793 LYSMD2Q8IV50 215 aa13.51□□□□□ -0.25
CXCL12-204ENST00000395793 GDPD1Q8N9F7 314 aa13.51□□□□□ -0.25
CXCL12-204ENST00000395793 TSPAN14Q8NG11 270 aa13.51□□□□□ -0.25
CXCL12-204ENST00000395793 OR5H2Q8NGV7 314 aa13.51□□□□□ -0.25
CXCL12-204ENST00000395793 NSG2Q9Y328 171 aa13.51□□□□□ -0.25
CXCL12-204ENST00000395793 SCAF4O95104 1147 aaKnown RBP13.5□□□□□ -0.25
CXCL12-204ENST00000395793 C8orf88P0DMB2 117 aa13.5□□□□□ -0.25
CXCL12-204ENST00000395793 OR13C7P0DN81 318 aa13.5□□□□□ -0.25
CXCL12-204ENST00000395793 PTBP1P26599 531 aaKnown RBP eCLIP13.5□□□□□ -0.25
CXCL12-204ENST00000395793 HRH1P35367 487 aa13.5□□□□□ -0.25
CXCL12-204ENST00000395793 TAS2R46P59540 309 aa13.5□□□□□ -0.25
CXCL12-204ENST00000395793 GPX8Q8TED1 209 aa13.5□□□□□ -0.25
CXCL12-204ENST00000395793 SLC25A46Q96AG3 418 aa13.5□□□□□ -0.25
CXCL12-204ENST00000395793 DGCR14Q96DF8 476 aaKnown RBP13.5□□□□□ -0.25
CXCL12-204ENST00000395793 NDUFA4L2Q9NRX3 87 aa13.5□□□□□ -0.25
CXCL12-204ENST00000395793 A0A087WXM4 84 aa13.49□□□□□ -0.25
CXCL12-204ENST00000395793 DBX1A6NMT0 343 aa13.49□□□□□ -0.25
CXCL12-204ENST00000395793 F8W735 103 aaPredicted RBP13.49□□□□□ -0.25
CXCL12-204ENST00000395793 TGOLN2O43493 480 aa13.49□□□□□ -0.25
CXCL12-204ENST00000395793 KRASP01116 189 aa13.49□□□□□ -0.25
CXCL12-204ENST00000395793 SERPINE2P07093 398 aa13.49□□□□□ -0.25
CXCL12-204ENST00000395793 TRAPPC2P0DI81 140 aa13.49□□□□□ -0.25
CXCL12-204ENST00000395793 TRAPPC2BP0DI82 140 aa13.49□□□□□ -0.25
CXCL12-204ENST00000395793 HLA-DMAP28067 261 aa13.49□□□□□ -0.25
CXCL12-204ENST00000395793 PRSS3P35030 304 aa13.49□□□□□ -0.25
CXCL12-204ENST00000395793 G6PCP35575 357 aa13.49□□□□□ -0.25
CXCL12-204ENST00000395793 ERVK-16P61578 105 aa13.49□□□□□ -0.25
CXCL12-204ENST00000395793 NCS1P62166 190 aa13.49□□□□□ -0.25
CXCL12-204ENST00000395793 OR1L8Q8NGR8 309 aa13.49□□□□□ -0.25
CXCL12-204ENST00000395793 BORCS5Q969J3 196 aa13.49□□□□□ -0.25
CXCL12-204ENST00000395793 ZNF414Q96IQ9 312 aa13.49□□□□□ -0.25
CXCL12-204ENST00000395793 ZNF436Q9C0F3 470 aaPredicted RBP13.49□□□□□ -0.25
CXCL12-204ENST00000395793 DNAH1Q9P2D7 4330 aa13.48□□□□□ -0.25
CXCL12-204ENST00000395793 IGHV3-21A0A0B4J1V1 117 aa13.48□□□□□ -0.25
CXCL12-204ENST00000395793 GPR31O00270 319 aa13.48□□□□□ -0.25
CXCL12-204ENST00000395793 PHLDA2Q53GA4 152 aa13.48□□□□□ -0.25
CXCL12-204ENST00000395793 THOC7Q6I9Y2 204 aaKnown RBP13.48□□□□□ -0.25
CXCL12-204ENST00000395793 PLET1Q6UQ28 207 aa13.48□□□□□ -0.25
CXCL12-204ENST00000395793 VN1R17PQ8TDU5 208 aa13.48□□□□□ -0.25
CXCL12-204ENST00000395793 F11RQ9Y624 299 aaKnown RBP13.48□□□□□ -0.25
CXCL12-204ENST00000395793 TNFAIP8O95379 198 aa13.47□□□□□ -0.25
CXCL12-204ENST00000395793 VBP1P61758 197 aa13.47□□□□□ -0.25
CXCL12-204ENST00000395793 SLC25A24Q6NUK1 477 aa13.47□□□□□ -0.25
CXCL12-204ENST00000395793 SLC16A13Q7RTY0 426 aa13.47□□□□□ -0.25
CXCL12-204ENST00000395793 CADM3Q8N126 398 aa13.47□□□□□ -0.25
CXCL12-204ENST00000395793 OR52B4Q8NGK2 314 aa13.47□□□□□ -0.25
CXCL12-204ENST00000395793 OR6F1Q8NGZ6 308 aa13.47□□□□□ -0.25
CXCL12-204ENST00000395793 TMEM190Q8WZ59 177 aa13.47□□□□□ -0.25
CXCL12-204ENST00000395793 LSM10Q969L4 123 aaKnown RBP13.47□□□□□ -0.25
CXCL12-204ENST00000395793 CHRDL1Q9BU40 450 aa13.47□□□□□ -0.25
CXCL12-204ENST00000395793 FUNDC2Q9BWH2 189 aa13.47□□□□□ -0.25
CXCL12-204ENST00000395793 HINT2Q9BX68 163 aa13.47□□□□□ -0.25
CXCL12-204ENST00000395793 COMMD3Q9UBI1 195 aa13.47□□□□□ -0.25
CXCL12-204ENST00000395793 OR51B2Q9Y5P1 312 aa13.47□□□□□ -0.25
CXCL12-204ENST00000395793 OR2T8A6NH00 312 aa13.46□□□□□ -0.25
CXCL12-204ENST00000395793 K7EIM0 57 aa13.46□□□□□ -0.25
CXCL12-204ENST00000395793 ADMP35318 185 aa13.46□□□□□ -0.25
CXCL12-204ENST00000395793 ELLP55199 621 aaPredicted RBP13.46□□□□□ -0.25
CXCL12-204ENST00000395793 SNX29P2Q8IUI4 249 aa13.46□□□□□ -0.25
CXCL12-204ENST00000395793 MARC2Q969Z3 335 aa13.46□□□□□ -0.25
CXCL12-204ENST00000395793 VCX3AQ9NNX9 186 aa13.46□□□□□ -0.25
CXCL12-204ENST00000395793 THYN1Q9P016 225 aa13.46□□□□□ -0.25
CXCL12-204ENST00000395793 MRPL27Q9P0M9 148 aaKnown RBP13.46□□□□□ -0.25
CXCL12-204ENST00000395793 IGKV1-39P01597 117 aa13.45□□□□□ -0.26
CXCL12-204ENST00000395793 APOA1P02647 267 aa13.45□□□□□ -0.26
CXCL12-204ENST00000395793 IGKV1D-39P04432 117 aa13.45□□□□□ -0.26
CXCL12-204ENST00000395793 ELK1P19419 428 aa13.45□□□□□ -0.26
CXCL12-204ENST00000395793 HSD17B13Q7Z5P4 300 aaPredicted RBP13.45□□□□□ -0.26
CXCL12-204ENST00000395793 CMTM1Q8IZ96 169 aa13.45□□□□□ -0.26
CXCL12-204ENST00000395793 SCARB1Q8WTV0 552 aa13.45□□□□□ -0.26
CXCL12-204ENST00000395793 TMEM14BQ9NUH8 114 aa13.45□□□□□ -0.26
CXCL12-204ENST00000395793 UFC1Q9Y3C8 167 aa13.45□□□□□ -0.26
CXCL12-204ENST00000395793 TRAV25A0A0B4J276 109 aa13.44□□□□□ -0.26
CXCL12-204ENST00000395793 C15orf61A6NNL5 157 aa13.44□□□□□ -0.26
CXCL12-204ENST00000395793 HPGDSO60760 199 aa13.44□□□□□ -0.26
CXCL12-204ENST00000395793 TBC1D26Q86UD7 250 aa13.44□□□□□ -0.26
CXCL12-204ENST00000395793 BSCL2Q96G97 398 aaPredicted RBP13.44□□□□□ -0.26
CXCL12-204ENST00000395793 SEC22AQ96IW7 307 aa13.44□□□□□ -0.26
CXCL12-204ENST00000395793 GGTLC1Q9BX51 225 aa13.44□□□□□ -0.26
CXCL12-204ENST00000395793 C21orf62Q9NYP8 219 aa13.44□□□□□ -0.26
CXCL12-204ENST00000395793 IGHV3OR16-8A0A075B7F1 116 aa13.43□□□□□ -0.26
CXCL12-204ENST00000395793 SNAPC5O75971 98 aa13.43□□□□□ -0.26
CXCL12-204ENST00000395793 OR1L6Q8NGR2 347 aa13.43□□□□□ -0.26
CXCL12-204ENST00000395793 CMTM3Q96MX0 182 aa13.43□□□□□ -0.26
CXCL12-204ENST00000395793 OVOL2Q9BRP0 275 aa13.43□□□□□ -0.26
CXCL12-204ENST00000395793 NAA50Q9GZZ1 169 aaKnown RBP13.43□□□□□ -0.26
CXCL12-204ENST00000395793 SCPEP1Q9HB40 452 aa13.43□□□□□ -0.26
CXCL12-204ENST00000395793 PRNDQ9UKY0 176 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms