RNA–Protein interactions for RNA: ENST00000395418.7

IFT20-203, Transcript of intraflagellar transport 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene IFT20, Length 825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-203ENST00000395418 SPSB3Q6PJ21 355 aa11.14□□□□□ -0.63
IFT20-203ENST00000395418 AIFM2Q9BRQ8 373 aa11.14□□□□□ -0.63
IFT20-203ENST00000395418 KRTAP4-5Q9BYR2 181 aa11.14□□□□□ -0.63
IFT20-203ENST00000395418 COMMD5Q9GZQ3 224 aa11.14□□□□□ -0.63
IFT20-203ENST00000395418 SMPXQ9UHP9 88 aa11.14□□□□□ -0.63
IFT20-203ENST00000395418 PKD1P98161 4303 aa11.14□□□□□ -0.63
IFT20-203ENST00000395418 IGHV4-4A0A075B6R2 117 aa11.13□□□□□ -0.63
IFT20-203ENST00000395418 C15orf62A8K5M9 175 aa11.13□□□□□ -0.63
IFT20-203ENST00000395418 CYB5BO43169 146 aa11.13□□□□□ -0.63
IFT20-203ENST00000395418 MRPS14O60783 128 aaKnown RBP11.13□□□□□ -0.63
IFT20-203ENST00000395418 OR10A3P58181 314 aa11.13□□□□□ -0.63
IFT20-203ENST00000395418 CDNFQ49AH0 187 aa11.13□□□□□ -0.63
IFT20-203ENST00000395418 CNIH2Q6PI25 160 aa11.13□□□□□ -0.63
IFT20-203ENST00000395418 SPAG16Q8N0X2 631 aa11.13□□□□□ -0.63
IFT20-203ENST00000395418 GBGT1Q8N5D6 347 aa11.13□□□□□ -0.63
IFT20-203ENST00000395418 UBAC2Q8NBM4 344 aa11.13□□□□□ -0.63
IFT20-203ENST00000395418 ATG5Q9H1Y0 275 aa11.13□□□□□ -0.63
IFT20-203ENST00000395418 C8orf4Q9NR00 106 aa11.13□□□□□ -0.63
IFT20-203ENST00000395418 IGHV3-49A0A0A0MS15 119 aa11.12□□□□□ -0.63
IFT20-203ENST00000395418 UPK2O00526 184 aa11.12□□□□□ -0.63
IFT20-203ENST00000395418 CHEK1O14757 476 aa11.12□□□□□ -0.63
IFT20-203ENST00000395418 SERPINE2P07093 398 aa11.12□□□□□ -0.63
IFT20-203ENST00000395418 OR13C7P0DN81 318 aa11.12□□□□□ -0.63
IFT20-203ENST00000395418 PSMA1P25786 263 aaKnown RBP11.12□□□□□ -0.63
IFT20-203ENST00000395418 NR2C2APQ86WQ0 139 aa11.12□□□□□ -0.63
IFT20-203ENST00000395418 GDPD1Q8N9F7 314 aa11.12□□□□□ -0.63
IFT20-203ENST00000395418 SCARB1Q8WTV0 552 aa11.12□□□□□ -0.63
IFT20-203ENST00000395418 SRSF8Q9BRL6 282 aaKnown RBP11.12□□□□□ -0.63
IFT20-203ENST00000395418 RHPN1-AS1Q9BWJ2 59 aa11.12□□□□□ -0.63
IFT20-203ENST00000395418 QTRT1Q9BXR0 403 aaKnown RBP11.12□□□□□ -0.63
IFT20-203ENST00000395418 HRH4Q9H3N8 390 aa11.12□□□□□ -0.63
IFT20-203ENST00000395418 CCL28Q9NRJ3 127 aa11.12□□□□□ -0.63
IFT20-203ENST00000395418 C21orf62Q9NYP8 219 aa11.12□□□□□ -0.63
IFT20-203ENST00000395418 IGHV7-4-1A0A0J9YVY3 117 aa11.11□□□□□ -0.63
IFT20-203ENST00000395418 F8W735 103 aaPredicted RBP11.11□□□□□ -0.63
IFT20-203ENST00000395418 M0R2N4 97 aa11.11□□□□□ -0.63
IFT20-203ENST00000395418 RTL8CO15255 209 aa11.11□□□□□ -0.63
IFT20-203ENST00000395418 HLA-DMBP28068 263 aa11.11□□□□□ -0.63
IFT20-203ENST00000395418 WT1-ASQ06250 92 aa11.11□□□□□ -0.63
IFT20-203ENST00000395418 ARL6IP1Q15041 203 aa11.11□□□□□ -0.63
IFT20-203ENST00000395418 Q56UQ5 140 aa11.11□□□□□ -0.63
IFT20-203ENST00000395418 Q8NAQ8 132 aa11.11□□□□□ -0.63
IFT20-203ENST00000395418 TMEM116Q8NCL8 245 aa11.11□□□□□ -0.63
IFT20-203ENST00000395418 SECTM1Q8WVN6 248 aa11.11□□□□□ -0.63
IFT20-203ENST00000395418 DCSTAMPQ9H295 470 aa11.11□□□□□ -0.63
IFT20-203ENST00000395418 SCN3BQ9NY72 215 aa11.11□□□□□ -0.63
IFT20-203ENST00000395418 IGHV3OR16-13A0A075B7E8 117 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 IGHV3-74A0A0B4J1X5 117 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 TRAV10A0A0B4J240 114 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 IFITM5A6NNB3 132 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 C15orf61A6NNL5 157 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 SULT1C2O00338 296 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 PDCD5O14737 125 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 HPRT1P00492 218 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 TRAPPC2P0DI81 140 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 TRAPPC2BP0DI82 140 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 RBMY1A1P0DJD3 496 aaKnown RBP11.1□□□□□ -0.63
IFT20-203ENST00000395418 RBMY1CP0DJD4 496 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 NQO2P16083 231 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 TAS2R31P59538 309 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 RBMY1FQ15415 496 aaKnown RBP11.1□□□□□ -0.63
IFT20-203ENST00000395418 HACD4Q5VWC8 232 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 PVRIGQ6DKI7 326 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 Q6ZTC4 211 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 DMBX1Q8NFW5 382 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 NUDCD2Q8WVJ2 157 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 CMTM3Q96MX0 182 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 ATP6V0BQ99437 205 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 ANXA10Q9UJ72 324 aa11.1□□□□□ -0.63
IFT20-203ENST00000395418 DYNC1H1Q14204 4646 aaKnown RBP11.09□□□□□ -0.63
IFT20-203ENST00000395418 IGHV4-28A0A0C4DH34 117 aa11.09□□□□□ -0.63
IFT20-203ENST00000395418 TEX50A0A1B0GTY4 177 aa11.09□□□□□ -0.63
IFT20-203ENST00000395418 CTSGP08311 255 aa11.09□□□□□ -0.63
IFT20-203ENST00000395418 MLLT11Q13015 90 aaPredicted RBP11.09□□□□□ -0.63
IFT20-203ENST00000395418 POU2AF1Q16633 256 aa11.09□□□□□ -0.63
IFT20-203ENST00000395418 FAM90A2PQ658T7 463 aa11.09□□□□□ -0.63
IFT20-203ENST00000395418 LEMD1Q68G75 181 aa11.09□□□□□ -0.63
IFT20-203ENST00000395418 ZNF773Q6PK81 442 aa11.09□□□□□ -0.63
IFT20-203ENST00000395418 ZNF414Q96IQ9 312 aa11.09□□□□□ -0.63
IFT20-203ENST00000395418 ACOT13Q9NPJ3 140 aa11.09□□□□□ -0.63
IFT20-203ENST00000395418 TMEM140Q9NV12 185 aa11.09□□□□□ -0.63
IFT20-203ENST00000395418 F11RQ9Y624 299 aaKnown RBP11.09□□□□□ -0.63
IFT20-203ENST00000395418 TMEM235A6NFC5 223 aa11.08□□□□□ -0.64
IFT20-203ENST00000395418 K7EIM0 57 aa11.08□□□□□ -0.64
IFT20-203ENST00000395418 RBFOX2O43251 390 aaKnown RBP eCLIP11.08□□□□□ -0.64
IFT20-203ENST00000395418 YIF1AO95070 293 aa11.08□□□□□ -0.64
IFT20-203ENST00000395418 PAFAH1B2P68402 229 aa11.08□□□□□ -0.64
IFT20-203ENST00000395418 THOC7Q6I9Y2 204 aaKnown RBP11.08□□□□□ -0.64
IFT20-203ENST00000395418 HSD17B13Q7Z5P4 300 aaPredicted RBP11.08□□□□□ -0.64
IFT20-203ENST00000395418 CENPSQ8N2Z9 138 aa11.08□□□□□ -0.64
IFT20-203ENST00000395418 POM121L12Q8N7R1 296 aa11.08□□□□□ -0.64
IFT20-203ENST00000395418 HINT2Q9BX68 163 aa11.08□□□□□ -0.64
IFT20-203ENST00000395418 TRAV14DV4A0A0A6YYC5 116 aa11.07□□□□□ -0.64
IFT20-203ENST00000395418 TRAV1-2A0A0B4J238 106 aa11.07□□□□□ -0.64
IFT20-203ENST00000395418 PTHLHP12272 177 aa11.07□□□□□ -0.64
IFT20-203ENST00000395418 RAB3BP20337 219 aa11.07□□□□□ -0.64
IFT20-203ENST00000395418 FCGR2CP31995 323 aa11.07□□□□□ -0.64
IFT20-203ENST00000395418 GNG2P59768 71 aa11.07□□□□□ -0.64
IFT20-203ENST00000395418 DEFB131AP59861 70 aa11.07□□□□□ -0.64
IFT20-203ENST00000395418 RELQ04864 619 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms