RNA–Protein interactions for RNA: ENST00000394752.7

SFMBT1-201, Transcript of Scm like with four mbt domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFMBT1, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-201ENST00000394752 IMMP2LQ96T52 175 aa12.24□□□□□ -0.45
SFMBT1-201ENST00000394752 LPAR2Q9HBW0 351 aa12.24□□□□□ -0.45
SFMBT1-201ENST00000394752 CSPG4Q6UVK1 2322 aa12.24□□□□□ -0.45
SFMBT1-201ENST00000394752 HTR1DP28221 377 aa12.24□□□□□ -0.45
SFMBT1-201ENST00000394752 GCHFRP30047 84 aa12.24□□□□□ -0.45
SFMBT1-201ENST00000394752 RPL27AP46776 148 aaKnown RBP12.24□□□□□ -0.45
SFMBT1-201ENST00000394752 NUBP1P53384 320 aa12.24□□□□□ -0.45
SFMBT1-201ENST00000394752 RPL23P62829 140 aaKnown RBP12.24□□□□□ -0.45
SFMBT1-201ENST00000394752 TMEM183BQ1AE95 376 aa12.24□□□□□ -0.45
SFMBT1-201ENST00000394752 SMIM15Q7Z3B0 74 aa12.24□□□□□ -0.45
SFMBT1-201ENST00000394752 TUBA4BQ9H853 241 aa12.24□□□□□ -0.45
SFMBT1-201ENST00000394752 HIST1H2BKO60814 126 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 HIST1H2BJP06899 126 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 IL6RP08887 468 aaPredicted RBP12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 HIST1H2BOP23527 126 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 HIST1H2BBP33778 126 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 HIST1H2BDP58876 126 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 HIST1H2BCP62807 126 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 ARL16Q0P5N6 197 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 HIST2H2BEQ16778 126 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 WDR73Q6P4I2 378 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 SSC4DQ8WTU2 575 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 HIST1H2BHQ93079 126 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 HIST1H2BNQ99877 126 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 HIST1H2BMQ99879 126 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 AAMDCQ9H7C9 122 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 GNG7O60262 68 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 HIST1H1BP16401 226 aaKnown RBP12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 ZNF785A8K8V0 405 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 OR9G9P0C7N8 305 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 LYL1P12980 280 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 KIR2DL2P43627 348 aaPredicted RBP12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 IBA57Q5T440 356 aaKnown RBP12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 RASL11BQ9BPW5 248 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 C1QTNF9P0C862 333 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 DTX1Q86Y01 620 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 ZDHHC8Q9ULC8 765 aa12.23□□□□□ -0.45
SFMBT1-201ENST00000394752 PGPA6NDG6 321 aa12.22□□□□□ -0.45
SFMBT1-201ENST00000394752 MOSP00540 346 aa12.22□□□□□ -0.45
SFMBT1-201ENST00000394752 RAB1CQ92928 201 aa12.22□□□□□ -0.45
SFMBT1-201ENST00000394752 CEP295Q9C0D2 2601 aa12.22□□□□□ -0.45
SFMBT1-201ENST00000394752 P01737 135 aa12.22□□□□□ -0.45
SFMBT1-201ENST00000394752 HEPN1Q6WQI6 88 aa12.22□□□□□ -0.45
SFMBT1-201ENST00000394752 SFRP2Q96HF1 295 aa12.22□□□□□ -0.45
SFMBT1-201ENST00000394752 SFXN3Q9BWM7 321 aa12.22□□□□□ -0.45
SFMBT1-201ENST00000394752 M0R2Z0 102 aa12.22□□□□□ -0.45
SFMBT1-201ENST00000394752 CCL21O00585 134 aa12.22□□□□□ -0.45
SFMBT1-201ENST00000394752 IGHG3P01860 377 aa12.22□□□□□ -0.45
SFMBT1-201ENST00000394752 HOXA5P20719 270 aa12.22□□□□□ -0.45
SFMBT1-201ENST00000394752 ZNF146Q15072 292 aa12.22□□□□□ -0.45
SFMBT1-201ENST00000394752 TMUB1Q9BVT8 246 aa12.22□□□□□ -0.45
SFMBT1-201ENST00000394752 IGHV1-18A0A0C4DH31 117 aa12.21□□□□□ -0.45
SFMBT1-201ENST00000394752 IGF2RP11717 2491 aa12.21□□□□□ -0.45
SFMBT1-201ENST00000394752 CD40P25942 277 aa12.21□□□□□ -0.45
SFMBT1-201ENST00000394752 MORN2Q502X0 79 aa12.21□□□□□ -0.45
SFMBT1-201ENST00000394752 KLHDC1Q8N7A1 406 aa12.21□□□□□ -0.45
SFMBT1-201ENST00000394752 STARD4Q96DR4 205 aa12.21□□□□□ -0.45
SFMBT1-201ENST00000394752 MRPL18Q9H0U6 180 aaKnown RBP12.21□□□□□ -0.45
SFMBT1-201ENST00000394752 DDTP30046 118 aa12.21□□□□□ -0.45
SFMBT1-201ENST00000394752 SRP14P37108 136 aaKnown RBP12.21□□□□□ -0.45
SFMBT1-201ENST00000394752 TNFRSF19Q9NS68 423 aa12.21□□□□□ -0.45
SFMBT1-201ENST00000394752 IGHV3-35A0A0C4DH35 117 aa12.21□□□□□ -0.45
SFMBT1-201ENST00000394752 C8orf88P0DMB2 117 aa12.21□□□□□ -0.45
SFMBT1-201ENST00000394752 MMD2Q8IY49 270 aa12.21□□□□□ -0.45
SFMBT1-201ENST00000394752 PERPQ96FX8 193 aa12.21□□□□□ -0.45
SFMBT1-201ENST00000394752 DUTP33316 252 aaKnown RBP12.21□□□□□ -0.46
SFMBT1-201ENST00000394752 CENPWQ5EE01 88 aa12.21□□□□□ -0.46
SFMBT1-201ENST00000394752 FA2HQ7L5A8 372 aa12.21□□□□□ -0.46
SFMBT1-201ENST00000394752 PRSS3P2Q8NHM4 247 aa12.21□□□□□ -0.46
SFMBT1-201ENST00000394752 MRPL37Q9BZE1 423 aaKnown RBP12.21□□□□□ -0.46
SFMBT1-201ENST00000394752 DNAJC4Q9NNZ3 241 aa12.21□□□□□ -0.46
SFMBT1-201ENST00000394752 SAA2-SAA4A0A096LPE2 208 aa12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 KBTBD11-OT1A0A1B0GTJ5 212 aa12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 FOXI3A8MTJ6 420 aaPredicted RBP12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 M0R143 59 aa12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 SAA2P0DJI9 122 aaPredicted RBP12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 Q6P435 159 aa12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 Q6ZN92 141 aa12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 LINC00473A8K010 186 aa12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 MLNRO43193 412 aa12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 ARF6P62330 175 aa12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 RNF2Q99496 336 aa12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 RAB1BQ9H0U4 201 aa12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 ATRXP46100 2492 aa12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 C5orf52A6NGY3 159 aa12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 ZNF729A6NN14 1252 aaPredicted RBP12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 HYPMO75409 117 aa12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 VAMP3Q15836 100 aa12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 MIR17HGQ75NE6 70 aa12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 TCF23Q7RTU1 214 aa12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 NDFIP1Q9BT67 221 aa12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 HSPB7Q9UBY9 170 aa12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 AMMECR1Q9Y4X0 333 aaPredicted RBP12.2□□□□□ -0.46
SFMBT1-201ENST00000394752 SRSF7Q16629 238 aaKnown RBP eCLIP12.19□□□□□ -0.46
SFMBT1-201ENST00000394752 OR8B3Q8NGG8 313 aa12.19□□□□□ -0.46
SFMBT1-201ENST00000394752 OR8B2Q96RD0 313 aa12.19□□□□□ -0.46
SFMBT1-201ENST00000394752 WASHC3Q9Y3C0 194 aa12.19□□□□□ -0.46
SFMBT1-201ENST00000394752 IGKV3-7A0A075B6H7 116 aa12.19□□□□□ -0.46
SFMBT1-201ENST00000394752 A0A087WWC5 75 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms