RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 DMBX1Q8NFW5 382 aa13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 CXorf58Q96LI9 332 aa13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 SRSF8Q9BRL6 282 aaKnown RBP13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 ZNF2Q9BSG1 426 aaPredicted RBP13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 QTRT1Q9BXR0 403 aaKnown RBP13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 COMMD5Q9GZQ3 224 aa13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 IFT46Q9NQC8 304 aa13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 COMMD9Q9P000 198 aa13.67□□□□□ -0.22
PDLIM7-205ENST00000393551 A0A087WXM4 84 aa13.66□□□□□ -0.22
PDLIM7-205ENST00000393551 IGHV3-35A0A0C4DH35 117 aa13.66□□□□□ -0.22
PDLIM7-205ENST00000393551 F2RP25116 425 aa13.66□□□□□ -0.22
PDLIM7-205ENST00000393551 HERV-K104P61576 105 aa13.66□□□□□ -0.22
PDLIM7-205ENST00000393551 TMEM69Q5SWH9 247 aa13.66□□□□□ -0.22
PDLIM7-205ENST00000393551 ZNF57Q68EA5 555 aaPredicted RBP13.66□□□□□ -0.22
PDLIM7-205ENST00000393551 CD300LFQ8TDQ1 290 aa13.66□□□□□ -0.22
PDLIM7-205ENST00000393551 FCAMRQ8WWV6 532 aa13.66□□□□□ -0.22
PDLIM7-205ENST00000393551 FXYD6Q9H0Q3 95 aa13.66□□□□□ -0.22
PDLIM7-205ENST00000393551 MARCH11A6NNE9 402 aa13.65□□□□□ -0.22
PDLIM7-205ENST00000393551 SCAF4O95104 1147 aaKnown RBP13.65□□□□□ -0.22
PDLIM7-205ENST00000393551 EIF4EP06730 217 aaKnown RBP13.65□□□□□ -0.22
PDLIM7-205ENST00000393551 SERPINE2P07093 398 aa13.65□□□□□ -0.22
PDLIM7-205ENST00000393551 PTBP1P26599 531 aaKnown RBP eCLIP13.65□□□□□ -0.225e-12■■■■■ 40.8
PDLIM7-205ENST00000393551 BTNL8Q6UX41 500 aa13.65□□□□□ -0.22
PDLIM7-205ENST00000393551 GDPD1Q8N9F7 314 aa13.65□□□□□ -0.22
PDLIM7-205ENST00000393551 MRPS26Q9BYN8 205 aaKnown RBP13.65□□□□□ -0.22
PDLIM7-205ENST00000393551 NDUFA4L2Q9NRX3 87 aa13.65□□□□□ -0.22
PDLIM7-205ENST00000393551 NSG2Q9Y328 171 aa13.65□□□□□ -0.22
PDLIM7-205ENST00000393551 DBX1A6NMT0 343 aa13.64□□□□□ -0.23
PDLIM7-205ENST00000393551 TRAPPC2P0DI81 140 aa13.64□□□□□ -0.23
PDLIM7-205ENST00000393551 TRAPPC2BP0DI82 140 aa13.64□□□□□ -0.23
PDLIM7-205ENST00000393551 OR13C7P0DN81 318 aa13.64□□□□□ -0.23
PDLIM7-205ENST00000393551 LPAR6P43657 344 aa13.64□□□□□ -0.23
PDLIM7-205ENST00000393551 TSPAN14Q8NG11 270 aa13.64□□□□□ -0.23
PDLIM7-205ENST00000393551 DGCR14Q96DF8 476 aaKnown RBP13.64□□□□□ -0.23
PDLIM7-205ENST00000393551 ZNF436Q9C0F3 470 aaPredicted RBP13.64□□□□□ -0.23
PDLIM7-205ENST00000393551 BATF3Q9NR55 127 aa13.64□□□□□ -0.23
PDLIM7-205ENST00000393551 F8W735 103 aaPredicted RBP13.63□□□□□ -0.23
PDLIM7-205ENST00000393551 KRASP01116 189 aa13.63□□□□□ -0.23
PDLIM7-205ENST00000393551 HRH1P35367 487 aa13.63□□□□□ -0.23
PDLIM7-205ENST00000393551 G6PCP35575 357 aa13.63□□□□□ -0.23
PDLIM7-205ENST00000393551 PLET1Q6UQ28 207 aa13.63□□□□□ -0.23
PDLIM7-205ENST00000393551 OR1L8Q8NGR8 309 aa13.63□□□□□ -0.23
PDLIM7-205ENST00000393551 OR5H2Q8NGV7 314 aa13.63□□□□□ -0.23
PDLIM7-205ENST00000393551 VN1R17PQ8TDU5 208 aa13.63□□□□□ -0.23
PDLIM7-205ENST00000393551 GPX8Q8TED1 209 aa13.63□□□□□ -0.23
PDLIM7-205ENST00000393551 SLC25A46Q96AG3 418 aa13.63□□□□□ -0.23
PDLIM7-205ENST00000393551 ZNF414Q96IQ9 312 aa13.63□□□□□ -0.23
PDLIM7-205ENST00000393551 IGHV3-21A0A0B4J1V1 117 aa13.62□□□□□ -0.23
PDLIM7-205ENST00000393551 TGOLN2O43493 480 aa13.62□□□□□ -0.23
PDLIM7-205ENST00000393551 HLA-DMAP28067 261 aa13.62□□□□□ -0.23
PDLIM7-205ENST00000393551 PRSS3P35030 304 aa13.62□□□□□ -0.23
PDLIM7-205ENST00000393551 TAS2R46P59540 309 aa13.62□□□□□ -0.23
PDLIM7-205ENST00000393551 NCS1P62166 190 aa13.62□□□□□ -0.23
PDLIM7-205ENST00000393551 SLC16A13Q7RTY0 426 aa13.62□□□□□ -0.23
PDLIM7-205ENST00000393551 CADM3Q8N126 398 aa13.62□□□□□ -0.23
PDLIM7-205ENST00000393551 OR52B4Q8NGK2 314 aa13.62□□□□□ -0.23
PDLIM7-205ENST00000393551 BORCS5Q969J3 196 aa13.62□□□□□ -0.23
PDLIM7-205ENST00000393551 MRPL27Q9P0M9 148 aaKnown RBP13.62□□□□□ -0.23
PDLIM7-205ENST00000393551 OR2T8A6NH00 312 aa13.61□□□□□ -0.23
PDLIM7-205ENST00000393551 GPR31O00270 319 aa13.61□□□□□ -0.23
PDLIM7-205ENST00000393551 ELLP55199 621 aaPredicted RBP13.61□□□□□ -0.23
PDLIM7-205ENST00000393551 ERVK-16P61578 105 aa13.61□□□□□ -0.23
PDLIM7-205ENST00000393551 THOC7Q6I9Y2 204 aaKnown RBP13.61□□□□□ -0.23
PDLIM7-205ENST00000393551 SLC25A24Q6NUK1 477 aa13.61□□□□□ -0.23
PDLIM7-205ENST00000393551 OR6F1Q8NGZ6 308 aa13.61□□□□□ -0.23
PDLIM7-205ENST00000393551 SCARB1Q8WTV0 552 aa13.61□□□□□ -0.23
PDLIM7-205ENST00000393551 TMEM190Q8WZ59 177 aa13.61□□□□□ -0.23
PDLIM7-205ENST00000393551 MARC2Q969Z3 335 aa13.61□□□□□ -0.23
PDLIM7-205ENST00000393551 CHRDL1Q9BU40 450 aa13.61□□□□□ -0.23
PDLIM7-205ENST00000393551 VCX3AQ9NNX9 186 aa13.61□□□□□ -0.23
PDLIM7-205ENST00000393551 THYN1Q9P016 225 aa13.61□□□□□ -0.23
PDLIM7-205ENST00000393551 OR51B2Q9Y5P1 312 aa13.61□□□□□ -0.23
PDLIM7-205ENST00000393551 F11RQ9Y624 299 aaKnown RBP13.61□□□□□ -0.23
PDLIM7-205ENST00000393551 K7EIM0 57 aa13.6□□□□□ -0.23
PDLIM7-205ENST00000393551 ADMP35318 185 aa13.6□□□□□ -0.23
PDLIM7-205ENST00000393551 PHLDA2Q53GA4 152 aa13.6□□□□□ -0.23
PDLIM7-205ENST00000393551 HSD17B13Q7Z5P4 300 aaPredicted RBP13.6□□□□□ -0.23
PDLIM7-205ENST00000393551 CMTM1Q8IZ96 169 aa13.6□□□□□ -0.23
PDLIM7-205ENST00000393551 LSM10Q969L4 123 aaKnown RBP13.6□□□□□ -0.23
PDLIM7-205ENST00000393551 HINT2Q9BX68 163 aa13.6□□□□□ -0.23
PDLIM7-205ENST00000393551 COMMD3Q9UBI1 195 aa13.6□□□□□ -0.23
PDLIM7-205ENST00000393551 UFC1Q9Y3C8 167 aa13.6□□□□□ -0.23
PDLIM7-205ENST00000393551 TRAV25A0A0B4J276 109 aa13.59□□□□□ -0.23
PDLIM7-205ENST00000393551 IGKV1-39P01597 117 aa13.59□□□□□ -0.23
PDLIM7-205ENST00000393551 IGKV1D-39P04432 117 aa13.59□□□□□ -0.23
PDLIM7-205ENST00000393551 RPL5P46777 297 aaKnown RBP13.59□□□□□ -0.23
PDLIM7-205ENST00000393551 BSCL2Q96G97 398 aaPredicted RBP13.59□□□□□ -0.23
PDLIM7-205ENST00000393551 OVOL2Q9BRP0 275 aa13.59□□□□□ -0.23
PDLIM7-205ENST00000393551 FUNDC2Q9BWH2 189 aa13.59□□□□□ -0.23
PDLIM7-205ENST00000393551 C5orf66Q9H5L9 145 aa13.59□□□□□ -0.23
PDLIM7-205ENST00000393551 TMEM14BQ9NUH8 114 aa13.59□□□□□ -0.23
PDLIM7-205ENST00000393551 IGHV3OR16-8A0A075B7F1 116 aa13.58□□□□□ -0.24
PDLIM7-205ENST00000393551 APOA1P02647 267 aa13.58□□□□□ -0.24
PDLIM7-205ENST00000393551 SMIM18P0DKX4 95 aa13.58□□□□□ -0.24
PDLIM7-205ENST00000393551 ELK1P19419 428 aa13.58□□□□□ -0.24
PDLIM7-205ENST00000393551 VBP1P61758 197 aa13.58□□□□□ -0.24
PDLIM7-205ENST00000393551 OR1L6Q8NGR2 347 aa13.58□□□□□ -0.24
PDLIM7-205ENST00000393551 SEC22AQ96IW7 307 aa13.58□□□□□ -0.24
PDLIM7-205ENST00000393551 GGTLC1Q9BX51 225 aa13.58□□□□□ -0.24
PDLIM7-205ENST00000393551 C21orf62Q9NYP8 219 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms