RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 LAMA5O15230 3695 aa11.52□□□□□ -0.57
CCDC57-203ENST00000392343 SIAH2O43255 324 aa11.52□□□□□ -0.57
CCDC57-203ENST00000392343 CA2P00918 260 aa11.52□□□□□ -0.57
CCDC57-203ENST00000392343 SRIP30626 198 aa11.52□□□□□ -0.57
CCDC57-203ENST00000392343 RAB7AP51149 207 aa11.52□□□□□ -0.57
CCDC57-203ENST00000392343 DCAF16Q9NXF7 216 aa11.52□□□□□ -0.57
CCDC57-203ENST00000392343 LSM4Q9Y4Z0 139 aaKnown RBP11.52□□□□□ -0.57
CCDC57-203ENST00000392343 TNRC18O15417 2968 aaPredicted RBP11.52□□□□□ -0.57
CCDC57-203ENST00000392343 A0A1W2PS18 150 aa11.51□□□□□ -0.57
CCDC57-203ENST00000392343 ESDP10768 282 aa11.51□□□□□ -0.57
CCDC57-203ENST00000392343 PRDX2P32119 198 aa11.51□□□□□ -0.57
CCDC57-203ENST00000392343 ZNF83P51522 516 aa11.51□□□□□ -0.57
CCDC57-203ENST00000392343 MRPS11P82912 194 aaKnown RBP11.51□□□□□ -0.57
CCDC57-203ENST00000392343 GABRA6Q16445 453 aa11.51□□□□□ -0.57
CCDC57-203ENST00000392343 SSBP3Q9BWW4 388 aaPredicted RBP11.51□□□□□ -0.57
CCDC57-203ENST00000392343 ZNF586Q9NXT0 402 aa11.51□□□□□ -0.57
CCDC57-203ENST00000392343 YLPM1P49750 1951 aaKnown RBP11.51□□□□□ -0.57
CCDC57-203ENST00000392343 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.51□□□□□ -0.57
CCDC57-203ENST00000392343 A0A1W2PNU3 283 aaPredicted RBP11.51□□□□□ -0.57
CCDC57-203ENST00000392343 OR7C2O60412 319 aa11.51□□□□□ -0.57
CCDC57-203ENST00000392343 CER1O95813 267 aa11.51□□□□□ -0.57
CCDC57-203ENST00000392343 SFTPCP11686 197 aa11.51□□□□□ -0.57
CCDC57-203ENST00000392343 SUMO1P63165 101 aaKnown RBP11.51□□□□□ -0.57
CCDC57-203ENST00000392343 TCTEX1D1Q8N7M0 179 aa11.51□□□□□ -0.57
CCDC57-203ENST00000392343 STPG4Q8N801 248 aa11.51□□□□□ -0.57
CCDC57-203ENST00000392343 STARD4Q96DR4 205 aa11.51□□□□□ -0.57
CCDC57-203ENST00000392343 CXXC4Q9H2H0 198 aa11.51□□□□□ -0.57
CCDC57-203ENST00000392343 TUBG2Q9NRH3 451 aa11.51□□□□□ -0.57
CCDC57-203ENST00000392343 TRGV10A0A0A0MS01 117 aa11.5□□□□□ -0.57
CCDC57-203ENST00000392343 NPY1RP25929 384 aa11.5□□□□□ -0.57
CCDC57-203ENST00000392343 CHRNB4P30926 498 aa11.5□□□□□ -0.57
CCDC57-203ENST00000392343 Q0VG73 95 aa11.5□□□□□ -0.57
CCDC57-203ENST00000392343 LCN12Q6JVE5 192 aa11.5□□□□□ -0.57
CCDC57-203ENST00000392343 LINC00479Q96M42 142 aa11.5□□□□□ -0.57
CCDC57-203ENST00000392343 TXN2Q99757 166 aa11.5□□□□□ -0.57
CCDC57-203ENST00000392343 TXNDC17Q9BRA2 123 aa11.5□□□□□ -0.57
CCDC57-203ENST00000392343 TRGV5A0A0B4J1U4 118 aa11.5□□□□□ -0.57
CCDC57-203ENST00000392343 SMIM21Q3B7S5 101 aa11.5□□□□□ -0.57
CCDC57-203ENST00000392343 FAM201AQ5SY85 155 aa11.5□□□□□ -0.57
CCDC57-203ENST00000392343 Q6ZN92 141 aa11.5□□□□□ -0.57
CCDC57-203ENST00000392343 SLC24A4Q8NFF2 622 aa11.5□□□□□ -0.57
CCDC57-203ENST00000392343 DNAJC4Q9NNZ3 241 aa11.5□□□□□ -0.57
CCDC57-203ENST00000392343 SPRNQ5BIV9 151 aa11.5□□□□□ -0.57
CCDC57-203ENST00000392343 TMEM136Q6ZRR5 245 aa11.5□□□□□ -0.57
CCDC57-203ENST00000392343 WDR31Q8NA23 367 aa11.5□□□□□ -0.57
CCDC57-203ENST00000392343 OR2Z1Q8NG97 314 aa11.5□□□□□ -0.57
CCDC57-203ENST00000392343 FAM168AQ92567 244 aa11.5□□□□□ -0.57
CCDC57-203ENST00000392343 SFXN3Q9BWM7 321 aa11.5□□□□□ -0.57
CCDC57-203ENST00000392343 OPN3Q9H1Y3 402 aaPredicted RBP11.5□□□□□ -0.57
CCDC57-203ENST00000392343 RP1L1Q8IWN7 2480 aaPredicted RBP11.49□□□□□ -0.57
CCDC57-203ENST00000392343 KLRC4-KLRK1H3BQV0 150 aa11.49□□□□□ -0.57
CCDC57-203ENST00000392343 ADH4P08319 380 aa11.49□□□□□ -0.57
CCDC57-203ENST00000392343 COL5A1-AS1Q5SY13 56 aa11.49□□□□□ -0.57
CCDC57-203ENST00000392343 GNB1LQ9BYB4 327 aa11.49□□□□□ -0.57
CCDC57-203ENST00000392343 MT-CO2P00403 227 aa11.49□□□□□ -0.57
CCDC57-203ENST00000392343 C3orf79P0CE67 100 aa11.49□□□□□ -0.57
CCDC57-203ENST00000392343 GAGE1Q13065 139 aa11.49□□□□□ -0.57
CCDC57-203ENST00000392343 C1orf174Q8IYL3 243 aa11.49□□□□□ -0.57
CCDC57-203ENST00000392343 IGKV1D-17A0A075B6S4 117 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 BMPR1BO00238 502 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 LINC00869P0C866 280 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 TMPRSS3P57727 454 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 CX3CL1P78423 397 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 OR4A47Q6IF82 309 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 ZNF503Q96F45 646 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 SLC35E1Q96K37 410 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 TRIB1Q96RU8 372 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 RNF2Q99496 336 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 NABP2Q9BQ15 211 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 IFI27L2Q9H2X8 130 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 ENY2Q9NPA8 101 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 IGKV1OR2-108A0A075B7D4 117 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 GGTLC3B5MD39 225 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 C9JCJ5 164 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 HYPMO75409 117 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 TNFSF15O95150 251 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 FAM214BQ7L5A3 538 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 PRR7Q8TB68 274 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 C11orf52Q96A22 123 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 PLEKHA3Q9HB20 300 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 ZNRD1Q9P1U0 126 aa11.48□□□□□ -0.57
CCDC57-203ENST00000392343 CTRLP40313 264 aa11.47□□□□□ -0.57
CCDC57-203ENST00000392343 HINT1P49773 126 aaPredicted RBP11.47□□□□□ -0.57
CCDC57-203ENST00000392343 RAB31Q13636 194 aa11.47□□□□□ -0.57
CCDC57-203ENST00000392343 TIGITQ495A1 244 aa11.47□□□□□ -0.57
CCDC57-203ENST00000392343 VWA1Q6PCB0 445 aa11.47□□□□□ -0.57
CCDC57-203ENST00000392343 OR4B1Q8NGF8 309 aa11.47□□□□□ -0.57
CCDC57-203ENST00000392343 GMPPAQ96IJ6 420 aaPredicted RBP11.47□□□□□ -0.57
CCDC57-203ENST00000392343 KCNS1Q96KK3 526 aa11.47□□□□□ -0.57
CCDC57-203ENST00000392343 KLF13Q9Y2Y9 288 aaPredicted RBP11.47□□□□□ -0.57
CCDC57-203ENST00000392343 INTS1Q8N201 2190 aaKnown RBP11.47□□□□□ -0.57
CCDC57-203ENST00000392343 TRAV5A0A0B4J249 113 aa11.47□□□□□ -0.57
CCDC57-203ENST00000392343 NDUFB8O95169 186 aa11.47□□□□□ -0.57
CCDC57-203ENST00000392343 GNG10P50151 68 aa11.47□□□□□ -0.57
CCDC57-203ENST00000392343 LOXL3P58215 753 aa11.47□□□□□ -0.57
CCDC57-203ENST00000392343 RELQ04864 619 aaPredicted RBP11.47□□□□□ -0.57
CCDC57-203ENST00000392343 IBA57Q5T440 356 aaKnown RBP11.47□□□□□ -0.57
CCDC57-203ENST00000392343 FAM90A1Q86YD7 464 aa11.47□□□□□ -0.57
CCDC57-203ENST00000392343 IL19Q9UHD0 177 aa11.47□□□□□ -0.57
CCDC57-203ENST00000392343 CDC42EP3Q9UKI2 254 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms