RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 OR4A47Q6IF82 309 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 MDS2Q8NDY4 140 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 GMPPAQ96IJ6 420 aaPredicted RBP11.52□□□□□ -0.57
SDC1-202ENST00000381150 SSBP4Q9BWG4 385 aaPredicted RBP11.52□□□□□ -0.57
SDC1-202ENST00000381150 GAL3ST2Q9H3Q3 398 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 ZNF331Q9NQX6 463 aaPredicted RBP11.52□□□□□ -0.57
SDC1-202ENST00000381150 B4GALT7Q9UBV7 327 aa11.52□□□□□ -0.57
SDC1-202ENST00000381150 DMXL2Q8TDJ6 3036 aa11.51□□□□□ -0.57
SDC1-202ENST00000381150 SNAI2O43623 268 aa11.51□□□□□ -0.57
SDC1-202ENST00000381150 ZNF324O75467 553 aaPredicted RBP11.51□□□□□ -0.57
SDC1-202ENST00000381150 CD99P14209 185 aa11.51□□□□□ -0.57
SDC1-202ENST00000381150 TIGITQ495A1 244 aa11.51□□□□□ -0.57
SDC1-202ENST00000381150 DCTN5Q9BTE1 182 aa11.51□□□□□ -0.57
SDC1-202ENST00000381150 CLEC7AQ9BXN2 247 aa11.51□□□□□ -0.57
SDC1-202ENST00000381150 RPH3ALQ9UNE2 315 aa11.51□□□□□ -0.57
SDC1-202ENST00000381150 LAMA5O15230 3695 aa11.51□□□□□ -0.57
SDC1-202ENST00000381150 WNT9BO14905 357 aa11.51□□□□□ -0.57
SDC1-202ENST00000381150 CXorf1O96002 111 aa11.51□□□□□ -0.57
SDC1-202ENST00000381150 USF1P22415 310 aaPredicted RBP11.51□□□□□ -0.57
SDC1-202ENST00000381150 COX11Q9Y6N1 276 aa11.51□□□□□ -0.57
SDC1-202ENST00000381150 PRB4P10163 310 aaPredicted RBP11.5□□□□□ -0.57
SDC1-202ENST00000381150 RNPS1Q15287 305 aaKnown RBP11.5□□□□□ -0.57
SDC1-202ENST00000381150 DHRS13Q6UX07 377 aa11.5□□□□□ -0.57
SDC1-202ENST00000381150 Q6ZS49 121 aa11.5□□□□□ -0.57
SDC1-202ENST00000381150 KCNS1Q96KK3 526 aa11.5□□□□□ -0.57
SDC1-202ENST00000381150 HSD17B10Q99714 261 aaKnown RBP11.5□□□□□ -0.57
SDC1-202ENST00000381150 CLEC5AQ9NY25 188 aa11.5□□□□□ -0.57
SDC1-202ENST00000381150 TMPRSS2O15393 492 aa11.5□□□□□ -0.57
SDC1-202ENST00000381150 CA2P00918 260 aa11.5□□□□□ -0.57
SDC1-202ENST00000381150 SP1P08047 785 aa11.5□□□□□ -0.57
SDC1-202ENST00000381150 EAF1Q96JC9 268 aaPredicted RBP11.5□□□□□ -0.57
SDC1-202ENST00000381150 OBP2BQ9NPH6 170 aa11.5□□□□□ -0.57
SDC1-202ENST00000381150 GNG12Q9UBI6 72 aa11.5□□□□□ -0.57
SDC1-202ENST00000381150 APCSP02743 223 aa11.5□□□□□ -0.57
SDC1-202ENST00000381150 PSG1P11464 419 aa11.5□□□□□ -0.57
SDC1-202ENST00000381150 TNFSF4P23510 183 aa11.5□□□□□ -0.57
SDC1-202ENST00000381150 GCHFRP30047 84 aa11.5□□□□□ -0.57
SDC1-202ENST00000381150 LGALS4P56470 323 aa11.5□□□□□ -0.57
SDC1-202ENST00000381150 MPV17L2Q567V2 206 aa11.5□□□□□ -0.57
SDC1-202ENST00000381150 PMCHL2Q9BQD1 86 aa11.5□□□□□ -0.57
SDC1-202ENST00000381150 FZR1Q9UM11 496 aa11.5□□□□□ -0.57
SDC1-202ENST00000381150 PCNX2A6NKB5 2137 aa11.49□□□□□ -0.57
SDC1-202ENST00000381150 RAB29O14966 203 aa11.49□□□□□ -0.57
SDC1-202ENST00000381150 CD24P25063 80 aa11.49□□□□□ -0.57
SDC1-202ENST00000381150 MFAP2P55001 183 aa11.49□□□□□ -0.57
SDC1-202ENST00000381150 POM121L2Q96KW2 1035 aa11.49□□□□□ -0.57
SDC1-202ENST00000381150 SH2D7A6NKC9 451 aaPredicted RBP11.49□□□□□ -0.57
SDC1-202ENST00000381150 LINC00473A8K010 186 aa11.49□□□□□ -0.57
SDC1-202ENST00000381150 C15orf62A8K5M9 175 aa11.49□□□□□ -0.57
SDC1-202ENST00000381150 C12orf77C9JDV5 145 aa11.49□□□□□ -0.57
SDC1-202ENST00000381150 FAM90A26D6RGX4 464 aa11.49□□□□□ -0.57
SDC1-202ENST00000381150 HBZP02008 142 aa11.49□□□□□ -0.57
SDC1-202ENST00000381150 FOXA3P55318 350 aaPredicted RBP11.49□□□□□ -0.57
SDC1-202ENST00000381150 TRAT1Q6PIZ9 186 aa11.49□□□□□ -0.57
SDC1-202ENST00000381150 TREML4Q6UXN2 200 aa11.49□□□□□ -0.57
SDC1-202ENST00000381150 GCNT2Q8N0V5 402 aa11.49□□□□□ -0.57
SDC1-202ENST00000381150 ABI3Q9P2A4 366 aa11.49□□□□□ -0.57
SDC1-202ENST00000381150 PSPNO60542 156 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 NUDT3O95989 172 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 OR9G9P0C7N8 305 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 RPL8P62917 257 aaKnown RBP11.48□□□□□ -0.57
SDC1-202ENST00000381150 ZNF841Q6ZN19 808 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 ZNF645Q8N7E2 425 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 ORAOV1Q8WV07 137 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 TNFSF15O95150 251 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 MEOX1P50221 254 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 RIPPLY3P57055 190 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 TNXAQ16473 311 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 ALKBH6Q3KRA9 238 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 MIR17HGQ75NE6 70 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 OR2T6Q8NHC8 308 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 TSKUQ8WUA8 353 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 LINC00479Q96M42 142 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 WDR83OSQ9Y284 106 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 CNOT1A5YKK6 2376 aaKnown RBP11.48□□□□□ -0.57
SDC1-202ENST00000381150 LOC105371242A0A075B767 164 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 PMS2P5A8MQ11 134 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 PRRX1P54821 245 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 SCCPDHQ8NBX0 429 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 OR8B2Q96RD0 313 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 MGST2Q99735 147 aa11.48□□□□□ -0.57
SDC1-202ENST00000381150 TRAV3A0A0B4J244 114 aa11.47□□□□□ -0.57
SDC1-202ENST00000381150 M0R1X1 148 aa11.47□□□□□ -0.57
SDC1-202ENST00000381150 MT-CO2P00403 227 aa11.47□□□□□ -0.57
SDC1-202ENST00000381150 RNFT1Q5M7Z0 435 aa11.47□□□□□ -0.57
SDC1-202ENST00000381150 IBA57Q5T440 356 aaKnown RBP11.47□□□□□ -0.57
SDC1-202ENST00000381150 ZNF355PQ9NSJ1 428 aa11.47□□□□□ -0.57
SDC1-202ENST00000381150 BMPR1BO00238 502 aa11.47□□□□□ -0.57
SDC1-202ENST00000381150 IGLL1P15814 213 aa11.47□□□□□ -0.57
SDC1-202ENST00000381150 ATP1A1-AS1Q5TC04 95 aa11.47□□□□□ -0.57
SDC1-202ENST00000381150 STPG3Q8N7X2 389 aa11.47□□□□□ -0.57
SDC1-202ENST00000381150 OR2D3Q8NGH3 330 aa11.47□□□□□ -0.57
SDC1-202ENST00000381150 LEAP2Q969E1 77 aa11.47□□□□□ -0.57
SDC1-202ENST00000381150 A0A1W2PN81 502 aa11.47□□□□□ -0.57
SDC1-202ENST00000381150 OR2T8A6NH00 312 aa11.47□□□□□ -0.57
SDC1-202ENST00000381150 APOA2P02652 100 aa11.47□□□□□ -0.57
SDC1-202ENST00000381150 ERVK-16P61578 105 aa11.47□□□□□ -0.57
SDC1-202ENST00000381150 PLGLB1Q02325 96 aa11.47□□□□□ -0.57
SDC1-202ENST00000381150 AMMECR1LQ6DCA0 310 aa11.47□□□□□ -0.57
SDC1-202ENST00000381150 GGTLC1Q9BX51 225 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms