RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 LINC00312Q9Y6C7 94 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 SPTBN4Q9H254 2564 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 A0A087WWC5 75 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 hADV38S2A0JD32 116 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 TCAPO15273 167 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 RPL31P62899 125 aaKnown RBP6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 MEF2BQ02080 365 aaPredicted RBP6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 WDR25Q64LD2 544 aaPredicted RBP6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 TMEM200BQ69YZ2 307 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 OR5T1Q8NG75 326 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 RNASE6Q93091 150 aaKnown RBP6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 ATP6V0BQ99437 205 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 P2RX4Q99571 388 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 MGST2Q99735 147 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 WNT10AQ9GZT5 417 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 PATZ1Q9HBE1 687 aaKnown RBP6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 SDF2L1Q9HCN8 221 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 TMEM14BQ9NUH8 114 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 PPIAL4EA0A075B759 164 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 TGIF2-C20orf24A0A0A6YYL0 155 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 PPIAL4DF5H284 164 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 YIF1AO95070 293 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 PLAUP00749 431 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 PPIAL4FP0DN26 164 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 DEFA6Q01524 100 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 DIAPH2-AS1Q14236 149 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 DIRC2Q96SL1 478 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 C2orf88Q9BSF0 95 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 ACTR3CQ9C0K3 210 aaPredicted RBP6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 SEPSECSQ9HD40 501 aaKnown RBP6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 RAB9BQ9NP90 201 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 CTSZQ9UBR2 303 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 PPIAL4AQ9Y536 164 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 PLXNB1O43157 2135 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 ABCA4P78363 2273 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 A0A1W2PN81 502 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 C5orf52A6NGY3 159 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 NKX6-3A6NJ46 265 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 C17orf112F2Z3M2 114 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 CHRNA7P36544 502 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 HSPE1P61604 102 aaKnown RBP6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 RBMS3Q6XE24 437 aaKnown RBP6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 OR13D1Q8NGV5 346 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 H1FXQ92522 213 aaKnown RBP6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 HINT2Q9BX68 163 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 TMEM106BQ9NUM4 274 aa6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 FOXA2Q9Y261 457 aaPredicted RBP6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 TPRP12270 2363 aaKnown RBP6.5□□□□□ -1.37
PDLIM5-204ENST00000380176 TRGV8A0A0C4DH27 118 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 TNFRSF13BO14836 293 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 PAGE4O60829 102 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 CA2P00918 260 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 IFNA1P01562 189 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 CD3EP07766 207 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 RPS10P46783 165 aaKnown RBP6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 REG1BP48304 166 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 CDC34P49427 236 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 NCMAPQ5T1S8 102 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 MIC13Q5XKP0 118 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 RPUSD4Q96CM3 377 aaKnown RBP6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 MALSU1Q96EH3 234 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 SLC35D1Q9NTN3 355 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 CYB5BO43169 146 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 IL6RP08887 468 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 PSMB3P49720 205 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 TMPRSS3P57727 454 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 CYB5R2Q6BCY4 276 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 OR4F5Q8NH21 305 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 LINC01560Q8TB33 94 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 SSMEM1Q8WWF3 244 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 ADTRPQ96IZ2 230 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 ZNF714Q96N38 554 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 OR4F4Q96R69 305 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 SMIM7Q9BQ49 75 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 GGTLC1Q9BX51 225 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 MRPL20Q9BYC9 149 aaKnown RBP6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 OR51B2Q9Y5P1 312 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 CSMD1Q96PZ7 3565 aa6.49□□□□□ -1.37
PDLIM5-204ENST00000380176 DVL1O14640 695 aa6.48□□□□□ -1.37
PDLIM5-204ENST00000380176 GHRHP01286 108 aa6.48□□□□□ -1.37
PDLIM5-204ENST00000380176 NPPCP23582 126 aa6.48□□□□□ -1.37
PDLIM5-204ENST00000380176 POU2AF1Q16633 256 aa6.48□□□□□ -1.37
PDLIM5-204ENST00000380176 ACOT6Q3I5F7 207 aaPredicted RBP6.48□□□□□ -1.37
PDLIM5-204ENST00000380176 ZNF833PQ6ZTB9 187 aa6.48□□□□□ -1.37
PDLIM5-204ENST00000380176 MOB3BQ86TA1 216 aa6.48□□□□□ -1.37
PDLIM5-204ENST00000380176 VKORC1Q9BQB6 163 aa6.48□□□□□ -1.37
PDLIM5-204ENST00000380176 GAL3ST2Q9H3Q3 398 aa6.48□□□□□ -1.37
PDLIM5-204ENST00000380176 GSX1Q9H4S2 264 aaPredicted RBP6.48□□□□□ -1.37
PDLIM5-204ENST00000380176 DYNLRB1Q9NP97 96 aa6.48□□□□□ -1.37
PDLIM5-204ENST00000380176 RNF24Q9Y225 148 aa6.48□□□□□ -1.37
PDLIM5-204ENST00000380176 LSM4Q9Y4Z0 139 aaKnown RBP6.48□□□□□ -1.37
PDLIM5-204ENST00000380176 NAV3Q8IVL0 2385 aa6.48□□□□□ -1.37
PDLIM5-204ENST00000380176 SVEP1Q4LDE5 3571 aa6.48□□□□□ -1.37
PDLIM5-204ENST00000380176 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.48□□□□□ -1.37
PDLIM5-204ENST00000380176 LYNX1G3V0Z9 82 aa6.48□□□□□ -1.37
PDLIM5-204ENST00000380176 UPK2O00526 184 aa6.48□□□□□ -1.37
PDLIM5-204ENST00000380176 UBE2CO00762 179 aa6.48□□□□□ -1.37
PDLIM5-204ENST00000380176 HRASP01112 189 aa6.48□□□□□ -1.37
PDLIM5-204ENST00000380176 SAA1P0DJI8 122 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms