RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 MSGN1A6NI15 193 aa16.75■□□□□ 0.27
CBWD3-202ENST00000377342 FAM90A26D6RGX4 464 aa16.75■□□□□ 0.27
CBWD3-202ENST00000377342 IFNA17P01571 189 aa16.75■□□□□ 0.27
CBWD3-202ENST00000377342 CRYBA1P05813 215 aa16.75■□□□□ 0.27
CBWD3-202ENST00000377342 SPCS3P61009 180 aa16.75■□□□□ 0.27
CBWD3-202ENST00000377342 ID3Q02535 119 aa16.75■□□□□ 0.27
CBWD3-202ENST00000377342 NOL4LQ96MY1 436 aaPredicted RBP16.75■□□□□ 0.27
CBWD3-202ENST00000377342 PDCD10Q9BUL8 212 aa16.75■□□□□ 0.27
CBWD3-202ENST00000377342 HINT2Q9BX68 163 aa16.75■□□□□ 0.27
CBWD3-202ENST00000377342 G3V318 75 aa16.75■□□□□ 0.27
CBWD3-202ENST00000377342 NDUFA7O95182 113 aa16.75■□□□□ 0.27
CBWD3-202ENST00000377342 MBPP02686 304 aaPredicted RBP16.75■□□□□ 0.27
CBWD3-202ENST00000377342 TRAPPC2P0DI81 140 aa16.75■□□□□ 0.27
CBWD3-202ENST00000377342 TRAPPC2BP0DI82 140 aa16.75■□□□□ 0.27
CBWD3-202ENST00000377342 AREGP15514 252 aa16.75■□□□□ 0.27
CBWD3-202ENST00000377342 NKX2-1P43699 371 aaPredicted RBP16.75■□□□□ 0.27
CBWD3-202ENST00000377342 WT1-ASQ06250 92 aa16.75■□□□□ 0.27
CBWD3-202ENST00000377342 LFNGQ8NES3 379 aa16.75■□□□□ 0.27
CBWD3-202ENST00000377342 NMES1Q9C002 83 aa16.75■□□□□ 0.27
CBWD3-202ENST00000377342 ZNF436Q9C0F3 470 aaPredicted RBP16.75■□□□□ 0.27
CBWD3-202ENST00000377342 MAGT1Q9H0U3 335 aa16.75■□□□□ 0.27
CBWD3-202ENST00000377342 ZNF580Q9UK33 172 aa16.75■□□□□ 0.27
CBWD3-202ENST00000377342 AP4M1O00189 453 aa16.74■□□□□ 0.27
CBWD3-202ENST00000377342 ECSCRQ19T08 205 aa16.74■□□□□ 0.27
CBWD3-202ENST00000377342 RBKSQ9H477 322 aa16.74■□□□□ 0.27
CBWD3-202ENST00000377342 C16orf95Q9H693 158 aa16.74■□□□□ 0.27
CBWD3-202ENST00000377342 RCL1Q9Y2P8 373 aaKnown RBP16.74■□□□□ 0.27
CBWD3-202ENST00000377342 SCGB1D2O95969 90 aa16.73■□□□□ 0.27
CBWD3-202ENST00000377342 VDAC2P45880 294 aaPredicted RBP16.73■□□□□ 0.27
CBWD3-202ENST00000377342 BCAP31P51572 246 aa16.73■□□□□ 0.27
CBWD3-202ENST00000377342 STPG2Q8N412 459 aa16.73■□□□□ 0.27
CBWD3-202ENST00000377342 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.73■□□□□ 0.27
CBWD3-202ENST00000377342 PLEKHA3Q9HB20 300 aa16.73■□□□□ 0.27
CBWD3-202ENST00000377342 WSB1Q9Y6I7 421 aa16.73■□□□□ 0.27
CBWD3-202ENST00000377342 POLR2GP62487 172 aaKnown RBP eCLIP16.72■□□□□ 0.27
CBWD3-202ENST00000377342 RAB32Q13637 225 aa16.72■□□□□ 0.27
CBWD3-202ENST00000377342 C19orf35Q6ZS72 473 aa16.72■□□□□ 0.27
CBWD3-202ENST00000377342 OR2T6Q8NHC8 308 aa16.72■□□□□ 0.27
CBWD3-202ENST00000377342 TRAV41A0A0B4J266 112 aa16.72■□□□□ 0.27
CBWD3-202ENST00000377342 HOXA1P49639 335 aaPredicted RBP16.72■□□□□ 0.27
CBWD3-202ENST00000377342 CFHR3Q02985 330 aa16.72■□□□□ 0.27
CBWD3-202ENST00000377342 ARSJQ5FYB0 599 aaPredicted RBP16.72■□□□□ 0.27
CBWD3-202ENST00000377342 SRSF8Q9BRL6 282 aaKnown RBP16.72■□□□□ 0.27
CBWD3-202ENST00000377342 CACFD1Q9UGQ2 172 aa16.72■□□□□ 0.27
CBWD3-202ENST00000377342 INS-IGF2F8WCM5 200 aa16.71■□□□□ 0.27
CBWD3-202ENST00000377342 K7EPK0 472 aa16.71■□□□□ 0.27
CBWD3-202ENST00000377342 SYNGR2O43760 224 aa16.71■□□□□ 0.27
CBWD3-202ENST00000377342 REG1AP05451 166 aa16.71■□□□□ 0.27
CBWD3-202ENST00000377342 GIPP09681 153 aaPredicted RBP16.71■□□□□ 0.27
CBWD3-202ENST00000377342 UNQ5815/PRO19632Q6UWF5 114 aa16.71■□□□□ 0.27
CBWD3-202ENST00000377342 LINC01006Q8NI28 216 aa16.71■□□□□ 0.27
CBWD3-202ENST00000377342 PPP1R1CQ8WVI7 109 aa16.71■□□□□ 0.27
CBWD3-202ENST00000377342 A0A1W2PN81 502 aa16.7■□□□□ 0.26
CBWD3-202ENST00000377342 CEBPZOSA8MTT3 80 aa16.7■□□□□ 0.26
CBWD3-202ENST00000377342 SSSCA1O60232 199 aa16.7■□□□□ 0.26
CBWD3-202ENST00000377342 SOX15O60248 233 aa16.7■□□□□ 0.26
CBWD3-202ENST00000377342 HKR1P10072 659 aa16.7■□□□□ 0.26
CBWD3-202ENST00000377342 IAPPP10997 89 aa16.7■□□□□ 0.26
CBWD3-202ENST00000377342 CHRNA7P36544 502 aa16.7■□□□□ 0.26
CBWD3-202ENST00000377342 AKIRIN2Q53H80 203 aa16.7■□□□□ 0.26
CBWD3-202ENST00000377342 DTD1Q8TEA8 209 aa16.7■□□□□ 0.26
CBWD3-202ENST00000377342 C11orf1Q9H5F2 150 aa16.7■□□□□ 0.26
CBWD3-202ENST00000377342 TMEM50AO95807 157 aa16.69■□□□□ 0.26
CBWD3-202ENST00000377342 OR13C7P0DN81 318 aa16.69■□□□□ 0.26
CBWD3-202ENST00000377342 PPIFP30405 207 aaKnown RBP16.69■□□□□ 0.26
CBWD3-202ENST00000377342 S100A10P60903 97 aa16.69■□□□□ 0.26
CBWD3-202ENST00000377342 CYCSP99999 105 aaKnown RBP16.69■□□□□ 0.26
CBWD3-202ENST00000377342 CD83Q01151 205 aa16.69■□□□□ 0.26
CBWD3-202ENST00000377342 LRRC37A5PQ49AS3 106 aa16.69■□□□□ 0.26
CBWD3-202ENST00000377342 OR2C3Q8N628 320 aa16.69■□□□□ 0.26
CBWD3-202ENST00000377342 WNT10AQ9GZT5 417 aa16.69■□□□□ 0.26
CBWD3-202ENST00000377342 LSM5Q9Y4Y9 91 aaKnown RBP16.69■□□□□ 0.26
CBWD3-202ENST00000377342 NPIPB5A8MRT5 1133 aa16.69■□□□□ 0.26
CBWD3-202ENST00000377342 CTRB1P17538 263 aa16.69■□□□□ 0.26
CBWD3-202ENST00000377342 KRTAP24-1Q3LI83 254 aa16.69■□□□□ 0.26
CBWD3-202ENST00000377342 CTRB2Q6GPI1 263 aa16.69■□□□□ 0.26
CBWD3-202ENST00000377342 C10orf99Q6UWK7 81 aa16.69■□□□□ 0.26
CBWD3-202ENST00000377342 HSD17B13Q7Z5P4 300 aaPredicted RBP16.69■□□□□ 0.26
CBWD3-202ENST00000377342 FBN1P35555 2871 aaKnown RBP16.68■□□□□ 0.26
CBWD3-202ENST00000377342 G3V3Q6 166 aa16.68■□□□□ 0.26
CBWD3-202ENST00000377342 H0YIZ8 118 aa16.68■□□□□ 0.26
CBWD3-202ENST00000377342 MED6O75586 246 aa16.68■□□□□ 0.26
CBWD3-202ENST00000377342 CRYGCP07315 174 aa16.68■□□□□ 0.26
CBWD3-202ENST00000377342 MDKP21741 143 aaPredicted RBP16.68■□□□□ 0.26
CBWD3-202ENST00000377342 PSMB6P28072 239 aa16.68■□□□□ 0.26
CBWD3-202ENST00000377342 BSXQ3C1V8 233 aa16.68■□□□□ 0.26
CBWD3-202ENST00000377342 TTC9CQ8N5M4 171 aa16.68■□□□□ 0.26
CBWD3-202ENST00000377342 OR4F5Q8NH21 305 aa16.68■□□□□ 0.26
CBWD3-202ENST00000377342 FAM110DQ8TAY7 271 aaPredicted RBP16.68■□□□□ 0.26
CBWD3-202ENST00000377342 WIPF2Q8TF74 440 aaPredicted RBP16.68■□□□□ 0.26
CBWD3-202ENST00000377342 ASB13Q8WXK3 278 aa16.68■□□□□ 0.26
CBWD3-202ENST00000377342 DMRT1Q9Y5R6 373 aa16.68■□□□□ 0.26
CBWD3-202ENST00000377342 TRAV14DV4A0A0A6YYC5 116 aa16.67■□□□□ 0.26
CBWD3-202ENST00000377342 WRBO00258 174 aa16.67■□□□□ 0.26
CBWD3-202ENST00000377342 FBXO24O75426 580 aa16.67■□□□□ 0.26
CBWD3-202ENST00000377342 PAX9P55771 341 aa16.67■□□□□ 0.26
CBWD3-202ENST00000377342 RAP2BP61225 183 aa16.67■□□□□ 0.26
CBWD3-202ENST00000377342 TMEM267Q0VDI3 215 aaPredicted RBP16.67■□□□□ 0.26
CBWD3-202ENST00000377342 ZNF114Q8NC26 417 aa16.67■□□□□ 0.26
CBWD3-202ENST00000377342 OR5T1Q8NG75 326 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms