RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 SSMEM1Q8WWF3 244 aa9.55□□□□□ -0.88
TM9SF2-201ENST00000376387 MGST2Q99735 147 aa9.55□□□□□ -0.88
TM9SF2-201ENST00000376387 IL36BQ9NZH7 164 aa9.55□□□□□ -0.88
TM9SF2-201ENST00000376387 GRPP07492 148 aa9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 NRN1LQ496H8 165 aa9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 RFESDQ8TAC1 157 aa9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 HBZP02008 142 aa9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 LGALS4P56470 323 aa9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 ERVK11-1P61568 191 aa9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 RPL31P62899 125 aaKnown RBP9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 C5orf64Q2M2E5 130 aa9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 ZNF718Q3SXZ3 478 aa9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 TREML4Q6UXN2 200 aa9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 ZNF703Q9H7S9 590 aaPredicted RBP9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 PTPRBP23467 1997 aa9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 IGKV3D-15A0A087WSY6 115 aa9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 CELA3BP08861 270 aa9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 SSTR5P35346 364 aa9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 LTC4SQ16873 150 aa9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 ZNF826PQ6ZT77 177 aa9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 OR8I2Q8N0Y5 310 aa9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 SAP25Q8TEE9 199 aa9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 GALMQ96C23 342 aa9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 C1orf159Q96HA4 380 aa9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 BTF3L4Q96K17 158 aa9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 CIB3Q96Q77 187 aaPredicted RBP9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 TSSC4Q9Y5U2 329 aaPredicted RBP9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 TNRC18O15417 2968 aaPredicted RBP9.54□□□□□ -0.88
TM9SF2-201ENST00000376387 DIRC3C9JPN6 131 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 RAB29O14966 203 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 GPX1P07203 203 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 SPATA45Q537H7 98 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 PRR31Q5SQ13 230 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 LINC00470Q9BZP3 86 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 FAM234AQ9H0X4 552 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 CTRLP40313 264 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 FOLR3P41439 243 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 RANP62826 216 aaKnown RBP9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 SMAGPQ0VAQ4 97 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 COL5A1-AS1Q5SY13 56 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 PPP1R32Q7Z5V6 425 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 ATOH7Q8N100 152 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 TMEM116Q8NCL8 245 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 DCTN5Q9BTE1 182 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 WNT10AQ9GZT5 417 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 FAM166BA8MTA8 275 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 K7EQM0 130 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 HAND1O96004 215 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 PMCHP20382 165 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 PLP2Q04941 152 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 IL11RAQ14626 422 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 OCIAD2Q56VL3 154 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 MRPL52Q86TS9 123 aaKnown RBP9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 MMD2Q8IY49 270 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 ABHD12Q8N2K0 398 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 SIGLECL1Q8N7X8 197 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 GGTLC1Q9BX51 225 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 ZFP30Q9Y2G7 519 aa9.53□□□□□ -0.88
TM9SF2-201ENST00000376387 URB1O60287 2271 aaKnown RBP9.52□□□□□ -0.88
TM9SF2-201ENST00000376387 TRAV3A0A0B4J244 114 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 H0Y8G0 127 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 IGHV3-13P01766 116 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 IGHV3-7P01780 117 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 TCL1AP56279 114 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 CLDN18P56856 261 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 FXYD3Q14802 87 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 SLC35E1Q96K37 410 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 UHRF2Q96PU4 802 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 ASCL2Q99929 193 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 NRN1Q9NPD7 142 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 KCNIP1Q9NZI2 227 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 METRNQ9UJH8 293 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 LOC105371242A0A075B767 164 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 K7EP13 123 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 CKS1BP61024 79 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 MDP1Q86V88 176 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 FAM19A2Q8N3H0 131 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 Q8TCH9 128 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 APH1AQ96BI3 265 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 COQ2Q96H96 371 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 RNASE7Q9H1E1 156 aaKnown RBP9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 PSG11Q9UQ72 335 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 V9GYV3 84 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 Q0VG73 95 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 CATR1Q13166 79 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 ZNF146Q15072 292 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 DUSP23Q9BVJ7 150 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 RTL8AQ9BWD3 113 aa9.52□□□□□ -0.89
TM9SF2-201ENST00000376387 A0A1W2PS18 150 aa9.51□□□□□ -0.89
TM9SF2-201ENST00000376387 PROP1O75360 226 aa9.51□□□□□ -0.89
TM9SF2-201ENST00000376387 HYPMO75409 117 aa9.51□□□□□ -0.89
TM9SF2-201ENST00000376387 CXorf1O96002 111 aa9.51□□□□□ -0.89
TM9SF2-201ENST00000376387 OPRK1P41145 380 aa9.51□□□□□ -0.89
TM9SF2-201ENST00000376387 ZNF83P51522 516 aa9.51□□□□□ -0.89
TM9SF2-201ENST00000376387 PDLIM3Q53GG5 364 aaPredicted RBP9.51□□□□□ -0.89
TM9SF2-201ENST00000376387 DOLPP1Q86YN1 238 aa9.51□□□□□ -0.89
TM9SF2-201ENST00000376387 GLMPQ8WWB7 406 aa9.51□□□□□ -0.89
TM9SF2-201ENST00000376387 PRR14LQ5THK1 2151 aa9.51□□□□□ -0.89
TM9SF2-201ENST00000376387 GCHFRP30047 84 aa9.51□□□□□ -0.89
TM9SF2-201ENST00000376387 AMTP48728 403 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms