RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 FNDC4Q9H6D8 234 aaPredicted RBP10.72□□□□□ -0.69
PRPF4-201ENST00000374198 DLL3Q9NYJ7 618 aa10.72□□□□□ -0.69
PRPF4-201ENST00000374198 AHRRA9YTQ3 701 aa10.71□□□□□ -0.69
PRPF4-201ENST00000374198 SCGB1A1P11684 91 aa10.71□□□□□ -0.69
PRPF4-201ENST00000374198 RPL8P62917 257 aaKnown RBP10.71□□□□□ -0.69
PRPF4-201ENST00000374198 IBA57Q5T440 356 aaKnown RBP10.71□□□□□ -0.69
PRPF4-201ENST00000374198 RASL11AQ6T310 242 aa10.71□□□□□ -0.69
PRPF4-201ENST00000374198 WFDC12Q8WWY7 111 aa10.71□□□□□ -0.69
PRPF4-201ENST00000374198 GGTLC1Q9BX51 225 aa10.71□□□□□ -0.69
PRPF4-201ENST00000374198 NPVFQ9HCQ7 196 aa10.71□□□□□ -0.69
PRPF4-201ENST00000374198 SERTAD4Q9NUC0 356 aa10.71□□□□□ -0.69
PRPF4-201ENST00000374198 ZNF835Q9Y2P0 537 aa10.71□□□□□ -0.69
PRPF4-201ENST00000374198 LILRA5A6NI73 299 aa10.71□□□□□ -0.69
PRPF4-201ENST00000374198 SYS1-DBNDD2H3BUS1 97 aa10.71□□□□□ -0.69
PRPF4-201ENST00000374198 FOXH1O75593 365 aa10.71□□□□□ -0.69
PRPF4-201ENST00000374198 GABRA6Q16445 453 aa10.71□□□□□ -0.69
PRPF4-201ENST00000374198 CEACAM21Q3KPI0 293 aa10.71□□□□□ -0.69
PRPF4-201ENST00000374198 FAM120AOSQ5T036 256 aa10.71□□□□□ -0.69
PRPF4-201ENST00000374198 TMEM108Q6UXF1 575 aa10.71□□□□□ -0.69
PRPF4-201ENST00000374198 FGFBP3Q8TAT2 258 aa10.71□□□□□ -0.69
PRPF4-201ENST00000374198 ZNF488Q96MN9 340 aa10.71□□□□□ -0.69
PRPF4-201ENST00000374198 WDR87Q6ZQQ6 2873 aa10.71□□□□□ -0.7
PRPF4-201ENST00000374198 KNL1Q8NG31 2342 aa10.71□□□□□ -0.7
PRPF4-201ENST00000374198 GDF1P27539 372 aa10.71□□□□□ -0.7
PRPF4-201ENST00000374198 GPR183P32249 361 aa10.71□□□□□ -0.7
PRPF4-201ENST00000374198 RPL30P62888 115 aaKnown RBP10.71□□□□□ -0.7
PRPF4-201ENST00000374198 SPATA31B1PQ5VZV4 182 aa10.71□□□□□ -0.7
PRPF4-201ENST00000374198 FADS6Q8N9I5 356 aa10.71□□□□□ -0.7
PRPF4-201ENST00000374198 FSCN3Q9NQT6 498 aa10.71□□□□□ -0.7
PRPF4-201ENST00000374198 ZNF292O60281 2723 aa10.7□□□□□ -0.7
PRPF4-201ENST00000374198 A0A1B0GX78 115 aa10.7□□□□□ -0.7
PRPF4-201ENST00000374198 NEURL1O76050 574 aa10.7□□□□□ -0.7
PRPF4-201ENST00000374198 HAND1O96004 215 aa10.7□□□□□ -0.7
PRPF4-201ENST00000374198 EFNB3Q15768 340 aa10.7□□□□□ -0.7
PRPF4-201ENST00000374198 SLC35E4Q6ICL7 350 aa10.7□□□□□ -0.7
PRPF4-201ENST00000374198 H2BFWTQ7Z2G1 175 aa10.7□□□□□ -0.7
PRPF4-201ENST00000374198 ANKRD37Q7Z713 158 aa10.7□□□□□ -0.7
PRPF4-201ENST00000374198 C1QTNF5Q9BXJ0 243 aa10.7□□□□□ -0.7
PRPF4-201ENST00000374198 ABI3Q9P2A4 366 aa10.7□□□□□ -0.7
PRPF4-201ENST00000374198 ZNF407Q9C0G0 2248 aa10.7□□□□□ -0.7
PRPF4-201ENST00000374198 WISP2O76076 250 aa10.7□□□□□ -0.7
PRPF4-201ENST00000374198 CA1P00915 261 aaPredicted RBP10.7□□□□□ -0.7
PRPF4-201ENST00000374198 ARL4DP49703 201 aa10.7□□□□□ -0.7
PRPF4-201ENST00000374198 SEC11AP67812 179 aa10.7□□□□□ -0.7
PRPF4-201ENST00000374198 GDF5OSQ5U4N7 250 aa10.7□□□□□ -0.7
PRPF4-201ENST00000374198 TMEM191AQ9H0A3 160 aa10.7□□□□□ -0.7
PRPF4-201ENST00000374198 K7EP34 96 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 IGLV2-8P01709 118 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 NTF4P34130 210 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 MOB1BQ7L9L4 216 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 URB1-AS1Q96HZ7 61 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 AP1S3Q96PC3 154 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 MS4A5Q9H3V2 200 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 WDR54Q9H977 334 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 SELENOKQ9Y6D0 94 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 GTF3C1Q12789 2109 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 A0A1B0GV72 72 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 C9orf118A6NHY6 69 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 PPIAL4DF5H284 164 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 C3orf80F5H4A9 247 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 MGST1P10620 155 aaKnown RBP10.69□□□□□ -0.7
PRPF4-201ENST00000374198 COL8A2P25067 703 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 BRWD1-AS2P59051 145 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 PEAR1Q5VY43 1037 aaPredicted RBP10.69□□□□□ -0.7
PRPF4-201ENST00000374198 SLC23A3Q6PIS1 610 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 ZNF645Q8N7E2 425 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 SSMEM1Q8WWF3 244 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 MS4A6AQ9H2W1 248 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 TRAPPC2LQ9UL33 140 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 PI4KAP42356 2102 aa10.69□□□□□ -0.7
PRPF4-201ENST00000374198 SH2D7A6NKC9 451 aaPredicted RBP10.68□□□□□ -0.7
PRPF4-201ENST00000374198 C17orf98A8MV24 154 aa10.68□□□□□ -0.7
PRPF4-201ENST00000374198 OR2J3O76001 311 aa10.68□□□□□ -0.7
PRPF4-201ENST00000374198 IGHV4-34P06331 123 aa10.68□□□□□ -0.7
PRPF4-201ENST00000374198 CD27P26842 260 aa10.68□□□□□ -0.7
PRPF4-201ENST00000374198 MFAP2P55001 183 aa10.68□□□□□ -0.7
PRPF4-201ENST00000374198 LINC00173Q6ZV60 143 aa10.68□□□□□ -0.7
PRPF4-201ENST00000374198 ZBTB34Q8NCN2 500 aa10.68□□□□□ -0.7
PRPF4-201ENST00000374198 JMJD8Q96S16 334 aa10.68□□□□□ -0.7
PRPF4-201ENST00000374198 PRDM14Q9GZV8 571 aa10.68□□□□□ -0.7
PRPF4-201ENST00000374198 TNRC6BQ9UPQ9 1833 aaKnown RBP10.68□□□□□ -0.7
PRPF4-201ENST00000374198 AZU1P20160 251 aa10.68□□□□□ -0.7
PRPF4-201ENST00000374198 PCBD1P61457 104 aa10.68□□□□□ -0.7
PRPF4-201ENST00000374198 PSG3Q16557 428 aa10.68□□□□□ -0.7
PRPF4-201ENST00000374198 FAM168AQ92567 244 aa10.68□□□□□ -0.7
PRPF4-201ENST00000374198 CEP250Q9BV73 2442 aa10.68□□□□□ -0.7
PRPF4-201ENST00000374198 PCDH15Q96QU1 1955 aa10.68□□□□□ -0.7
PRPF4-201ENST00000374198 FRYLO94915 3013 aa10.67□□□□□ -0.7
PRPF4-201ENST00000374198 C21orf140B9A014 251 aa10.67□□□□□ -0.7
PRPF4-201ENST00000374198 HBZP02008 142 aa10.67□□□□□ -0.7
PRPF4-201ENST00000374198 SMIM17P0DL12 118 aa10.67□□□□□ -0.7
PRPF4-201ENST00000374198 CA6P23280 308 aa10.67□□□□□ -0.7
PRPF4-201ENST00000374198 HTR1DP28221 377 aa10.67□□□□□ -0.7
PRPF4-201ENST00000374198 CT55Q8WUE5 264 aa10.67□□□□□ -0.7
PRPF4-201ENST00000374198 C5orf30Q96GV9 206 aa10.67□□□□□ -0.7
PRPF4-201ENST00000374198 PPIAL4EA0A075B759 164 aa10.67□□□□□ -0.7
PRPF4-201ENST00000374198 PPIAL4CA0A0B4J2A2 164 aa10.67□□□□□ -0.7
PRPF4-201ENST00000374198 A0A1W2PPC4 97 aa10.67□□□□□ -0.7
PRPF4-201ENST00000374198 H3BRM9 83 aa10.67□□□□□ -0.7
PRPF4-201ENST00000374198 PPIAL4FP0DN26 164 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms