RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 C7orf66A4D0T2 115 aa12.13□□□□□ -0.47
TRAF1-201ENST00000373887 B9A039 149 aa12.13□□□□□ -0.47
TRAF1-201ENST00000373887 PEX7O00628 323 aa12.13□□□□□ -0.47
TRAF1-201ENST00000373887 REPIN1Q9BWE0 567 aaKnown RBP12.13□□□□□ -0.47
TRAF1-201ENST00000373887 IFITM3Q01628 133 aa12.13□□□□□ -0.47
TRAF1-201ENST00000373887 Q6ZT83 130 aa12.13□□□□□ -0.47
TRAF1-201ENST00000373887 AQP3Q92482 292 aa12.13□□□□□ -0.47
TRAF1-201ENST00000373887 CLEC7AQ9BXN2 247 aa12.13□□□□□ -0.47
TRAF1-201ENST00000373887 TRBV9A0A0B4J1U6 114 aa12.13□□□□□ -0.47
TRAF1-201ENST00000373887 TRAV8-2A0A0B4J237 113 aa12.13□□□□□ -0.47
TRAF1-201ENST00000373887 GFI1BQ5VTD9 330 aa12.13□□□□□ -0.47
TRAF1-201ENST00000373887 FAM168AQ92567 244 aa12.13□□□□□ -0.47
TRAF1-201ENST00000373887 TUBGCP6Q96RT7 1819 aa12.13□□□□□ -0.47
TRAF1-201ENST00000373887 SPCS1Q9Y6A9 102 aa12.13□□□□□ -0.47
TRAF1-201ENST00000373887 PSME4Q14997 1843 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 SAPCD1Q5SSQ6 148 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 CYP2G1PQ6ZSU1 146 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 DERL1Q9BUN8 251 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 MRPL32Q9BYC8 188 aaKnown RBP12.12□□□□□ -0.47
TRAF1-201ENST00000373887 C5orf66Q9H5L9 145 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 NPIPB4C9JG80 1138 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 TMEM250H0YL14 139 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 H3BRM9 83 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 GCM2O75603 506 aaPredicted RBP12.12□□□□□ -0.47
TRAF1-201ENST00000373887 CELA3BP08861 270 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 LINC00614P0C842 121 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 C9orf106Q8NAJ2 232 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 LINC01587Q99440 93 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 FOXA2Q9Y261 457 aaPredicted RBP12.12□□□□□ -0.47
TRAF1-201ENST00000373887 TPRP12270 2363 aaKnown RBP12.12□□□□□ -0.47
TRAF1-201ENST00000373887 TRPM7Q96QT4 1865 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 SIPA1L1O43166 1804 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 IL6RP08887 468 aaPredicted RBP12.12□□□□□ -0.47
TRAF1-201ENST00000373887 CLDND2Q8NHS1 167 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 HIST1H2BAQ96A08 127 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 DMRT1Q9Y5R6 373 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 CECR9P0C854 216 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 CD59P13987 128 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 ZNF146Q15072 292 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 SEMA5BQ9P283 1151 aa12.12□□□□□ -0.47
TRAF1-201ENST00000373887 CGAP01215 116 aa12.11□□□□□ -0.47
TRAF1-201ENST00000373887 TEX45Q8NA69 505 aa12.11□□□□□ -0.47
TRAF1-201ENST00000373887 OR9G1Q8NH87 305 aa12.11□□□□□ -0.47
TRAF1-201ENST00000373887 CTHRC1Q96CG8 243 aa12.11□□□□□ -0.47
TRAF1-201ENST00000373887 LIPFP07098 398 aa12.11□□□□□ -0.47
TRAF1-201ENST00000373887 FAM71F2Q6NXP2 309 aa12.11□□□□□ -0.47
TRAF1-201ENST00000373887 PRR32B1ATL7 298 aa12.11□□□□□ -0.47
TRAF1-201ENST00000373887 PPP1R3EQ9H7J1 279 aa12.11□□□□□ -0.47
TRAF1-201ENST00000373887 JPT1Q9UK76 154 aa12.11□□□□□ -0.47
TRAF1-201ENST00000373887 EGR4Q05215 589 aa12.11□□□□□ -0.47
TRAF1-201ENST00000373887 FAM19A2Q8N3H0 131 aa12.11□□□□□ -0.47
TRAF1-201ENST00000373887 H7C1H1 209 aa12.1□□□□□ -0.47
TRAF1-201ENST00000373887 ERVH48-1M5A8F1 160 aa12.1□□□□□ -0.47
TRAF1-201ENST00000373887 TMEM54Q969K7 222 aa12.1□□□□□ -0.47
TRAF1-201ENST00000373887 GLMPQ8WWB7 406 aa12.1□□□□□ -0.47
TRAF1-201ENST00000373887 ASXL3Q9C0F0 2248 aa12.1□□□□□ -0.47
TRAF1-201ENST00000373887 ARID2Q68CP9 1835 aa12.1□□□□□ -0.47
TRAF1-201ENST00000373887 TRBV5-5A0A0J9YX44 114 aa12.1□□□□□ -0.47
TRAF1-201ENST00000373887 SCO2A0A1W2PP80 73 aa12.1□□□□□ -0.47
TRAF1-201ENST00000373887 NUTF2P61970 127 aaKnown RBP12.1□□□□□ -0.47
TRAF1-201ENST00000373887 TMEM187Q14656 261 aa12.1□□□□□ -0.47
TRAF1-201ENST00000373887 ZCCHC24Q8N2G6 241 aaKnown RBP12.1□□□□□ -0.47
TRAF1-201ENST00000373887 APC2O95996 2303 aa12.1□□□□□ -0.47
TRAF1-201ENST00000373887 TRGV2A0A075B6R0 118 aa12.1□□□□□ -0.47
TRAF1-201ENST00000373887 NIT1Q86X76 327 aa12.1□□□□□ -0.47
TRAF1-201ENST00000373887 ZFC3H1O60293 1989 aaKnown RBP12.1□□□□□ -0.47
TRAF1-201ENST00000373887 LOC390937A0A1W2PQ73 354 aa12.1□□□□□ -0.47
TRAF1-201ENST00000373887 KLF4O43474 513 aa12.1□□□□□ -0.47
TRAF1-201ENST00000373887 FOXH1O75593 365 aa12.1□□□□□ -0.47
TRAF1-201ENST00000373887 DANCRP0C864 163 aa12.1□□□□□ -0.47
TRAF1-201ENST00000373887 TFF3Q07654 80 aa12.1□□□□□ -0.47
TRAF1-201ENST00000373887 SPOCK3Q9BQ16 436 aa12.1□□□□□ -0.47
TRAF1-201ENST00000373887 MTCL1Q9Y4B5 1905 aaKnown RBP12.1□□□□□ -0.47
TRAF1-201ENST00000373887 IGHV1-2P23083 117 aa12.09□□□□□ -0.47
TRAF1-201ENST00000373887 H2BFSP57053 126 aa12.09□□□□□ -0.47
TRAF1-201ENST00000373887 PAX2Q02962 417 aa12.09□□□□□ -0.47
TRAF1-201ENST00000373887 DNM1P46Q6ZS02 220 aa12.09□□□□□ -0.47
TRAF1-201ENST00000373887 DRAM1Q8N682 238 aa12.09□□□□□ -0.47
TRAF1-201ENST00000373887 MRPS18AQ9NVS2 196 aaKnown RBP12.09□□□□□ -0.47
TRAF1-201ENST00000373887 LOC285556D6RIA3 1793 aa12.09□□□□□ -0.47
TRAF1-201ENST00000373887 TMEM50AO95807 157 aa12.09□□□□□ -0.47
TRAF1-201ENST00000373887 C2orf68Q2NKX9 166 aa12.09□□□□□ -0.47
TRAF1-201ENST00000373887 LINC00518Q8N0U6 118 aa12.09□□□□□ -0.47
TRAF1-201ENST00000373887 NEUROG1Q92886 237 aa12.09□□□□□ -0.47
TRAF1-201ENST00000373887 CLDN16Q9Y5I7 305 aa12.09□□□□□ -0.47
TRAF1-201ENST00000373887 LEPP41159 167 aa12.09□□□□□ -0.47
TRAF1-201ENST00000373887 SDHCQ99643 169 aaPredicted RBP12.09□□□□□ -0.47
TRAF1-201ENST00000373887 FAM90A26D6RGX4 464 aa12.09□□□□□ -0.47
TRAF1-201ENST00000373887 SRSF6Q13247 344 aaKnown RBP12.09□□□□□ -0.47
TRAF1-201ENST00000373887 TMEM186Q96B77 213 aa12.09□□□□□ -0.47
TRAF1-201ENST00000373887 SMIM8Q96KF7 97 aa12.09□□□□□ -0.47
TRAF1-201ENST00000373887 LYNX1G3V0Z9 82 aa12.09□□□□□ -0.47
TRAF1-201ENST00000373887 LYNX1P0DP58 116 aa12.09□□□□□ -0.47
TRAF1-201ENST00000373887 IGLV3-21P80748 117 aaPredicted RBP12.09□□□□□ -0.47
TRAF1-201ENST00000373887 TIMM23BQ5SRD1 257 aa12.09□□□□□ -0.47
TRAF1-201ENST00000373887 C7orf69Q9H7B7 122 aa12.09□□□□□ -0.47
TRAF1-201ENST00000373887 CKAP5Q14008 2032 aa12.09□□□□□ -0.47
TRAF1-201ENST00000373887 NDUFA2O43678 99 aa12.08□□□□□ -0.47
TRAF1-201ENST00000373887 SLC25A20O43772 301 aa12.08□□□□□ -0.47
TRAF1-201ENST00000373887 IGFBP2P18065 325 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms