RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 DYSFO75923 2080 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 TANC2Q9HCD6 1990 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 TRBV24-1A0A075B6N3 115 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 TRAV9-1A0A075B6T8 112 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 ELOA3CA0A087WX78 387 aaPredicted RBP7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 ZFP92A6NM28 416 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 ZNF727A8MUV8 499 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 SLC31A2O15432 143 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 IGLV1-47P01700 117 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 S100A8P05109 93 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 S100A6P06703 90 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 FABP1P07148 127 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 RAB5AP20339 215 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 S100PP25815 95 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 S100A7P31151 101 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 CD69Q07108 199 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 ZNF726P1Q15940 193 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 C4orf17Q53FE4 359 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 CYB561D1Q8N8Q1 229 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 OR4P4Q8NGL7 312 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 OR1L4Q8NGR5 311 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 RARRES2Q99969 163 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 GGTLC1Q9BX51 225 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 SH3BGRL2Q9UJC5 107 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 KLF2Q9Y5W3 355 aaPredicted RBP7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 PUS1Q9Y606 427 aaKnown RBP eCLIP7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 PXMP4Q9Y6I8 212 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 FREM2Q5SZK8 3169 aa7.1□□□□□ -1.27
SNRNP40-202ENST00000373720 CACNA1DQ01668 2161 aa7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 KIAA2026Q5HYC2 2103 aa7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 PPIAL4CA0A0B4J2A2 164 aa7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 MEX3AA1L020 520 aaKnown RBP7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 ACTL6BO94805 426 aa7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 CA2P00918 260 aa7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 C1QTNF9P0C862 333 aa7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 PPIAL4GP0DN37 164 aa7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 GPR6P46095 362 aaPredicted RBP7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 GNG10P50151 68 aa7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 B2MP61769 119 aa7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 RPS16P62249 146 aaKnown RBP7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 FAM201AQ5SY85 155 aa7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 WDR25Q64LD2 544 aaPredicted RBP7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 FAM90A2PQ658T7 463 aa7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 ACSM6Q6P461 480 aa7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 TMEM88Q6PEY1 159 aa7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 CBLN2Q8IUK8 224 aa7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 OR11H6Q8NGC7 330 aa7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 SAV1Q9H4B6 383 aaPredicted RBP7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 PATZ1Q9HBE1 687 aaKnown RBP7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 TECRQ9NZ01 308 aaKnown RBP7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 INSIG2Q9Y5U4 225 aa7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 URB1O60287 2271 aaKnown RBP7.09□□□□□ -1.27
SNRNP40-202ENST00000373720 DSCAML1Q8TD84 2053 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 USF3Q68DE3 2245 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 IGHV2-26A0A0B4J1V2 119 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 BUB1B-PAK6H3BSN5 160 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 RRHO14718 337 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 SCGB2A1O75556 95 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 CRYBA1P05813 215 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 SAA1P0DJI8 122 aaPredicted RBP7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 SELLP14151 372 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 SRP14P37108 136 aaKnown RBP7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 ELLP55199 621 aaPredicted RBP7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 BPIFB3P59826 476 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 CD81P60033 236 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 LCN2P80188 198 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 ADORA2A-AS1P86434 159 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 TFF3Q07654 80 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 HABP2Q14520 560 aaPredicted RBP7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 COX19Q49B96 90 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 MINOS1Q5TGZ0 78 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 KCNIP4Q6PIL6 250 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 ZNF841Q6ZN19 808 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 C11orf42Q8N5U0 333 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 Q8N7P7 452 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 HIST1H2BAQ96A08 127 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 SMIM12Q96EX1 92 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 OR5B12Q96R08 314 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 SMIM7Q9BQ49 75 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 FUT9Q9Y231 359 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 MINOS1-NBL1R4GNA1 71 aa7.08□□□□□ -1.28
SNRNP40-202ENST00000373720 PTPRZ1P23471 2315 aaPredicted RBP7.07□□□□□ -1.28
SNRNP40-202ENST00000373720 ACACAQ13085 2346 aa7.07□□□□□ -1.28
SNRNP40-202ENST00000373720 A0A1W2PRE2 83 aa7.07□□□□□ -1.28
SNRNP40-202ENST00000373720 FAM90A27PA6NNH2 459 aa7.07□□□□□ -1.28
SNRNP40-202ENST00000373720 C9JCJ5 164 aa7.07□□□□□ -1.28
SNRNP40-202ENST00000373720 C11orf94C9JXX5 98 aa7.07□□□□□ -1.28
SNRNP40-202ENST00000373720 NUPL2O15504 423 aaKnown RBP7.07□□□□□ -1.28
SNRNP40-202ENST00000373720 TFF1P04155 84 aa7.07□□□□□ -1.28
SNRNP40-202ENST00000373720 IGKV1-16P04430 117 aa7.07□□□□□ -1.28
SNRNP40-202ENST00000373720 S100A9P06702 114 aaKnown RBP7.07□□□□□ -1.28
SNRNP40-202ENST00000373720 RNASE2P10153 161 aaKnown RBP7.07□□□□□ -1.28
SNRNP40-202ENST00000373720 PRTN3P24158 256 aa7.07□□□□□ -1.28
SNRNP40-202ENST00000373720 PRR30Q53SZ7 412 aaPredicted RBP7.07□□□□□ -1.28
SNRNP40-202ENST00000373720 C11orf71Q6IPW1 123 aa7.07□□□□□ -1.28
SNRNP40-202ENST00000373720 UNQ6494/PRO21346Q6UXR6 183 aa7.07□□□□□ -1.28
SNRNP40-202ENST00000373720 SPNS3Q6ZMD2 512 aa7.07□□□□□ -1.28
SNRNP40-202ENST00000373720 STPG3Q8N7X2 389 aa7.07□□□□□ -1.28
SNRNP40-202ENST00000373720 THAP8Q8NA92 274 aa7.07□□□□□ -1.28
SNRNP40-202ENST00000373720 OR1P1Q8NH06 330 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms