RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 MPDU1O75352 247 aa13.11□□□□□ -0.31
PABPC4-202ENST00000372857 CA2P00918 260 aa13.11□□□□□ -0.31
PABPC4-202ENST00000372857 IGHV3-13P01766 116 aa13.11□□□□□ -0.31
PABPC4-202ENST00000372857 IGHV3-7P01780 117 aa13.11□□□□□ -0.31
PABPC4-202ENST00000372857 PRRX1P54821 245 aa13.11□□□□□ -0.31
PABPC4-202ENST00000372857 ZNF146Q15072 292 aa13.11□□□□□ -0.31
PABPC4-202ENST00000372857 GUCD1Q96NT3 240 aa13.11□□□□□ -0.31
PABPC4-202ENST00000372857 VPS25Q9BRG1 176 aa13.11□□□□□ -0.31
PABPC4-202ENST00000372857 POLDIP2Q9Y2S7 368 aa13.11□□□□□ -0.31
PABPC4-202ENST00000372857 IGKV3D-15A0A087WSY6 115 aa13.11□□□□□ -0.31
PABPC4-202ENST00000372857 CYB561P49447 251 aa13.11□□□□□ -0.31
PABPC4-202ENST00000372857 CX3CL1P78423 397 aa13.11□□□□□ -0.31
PABPC4-202ENST00000372857 Q6ZR03 302 aa13.11□□□□□ -0.31
PABPC4-202ENST00000372857 OR4C5Q8NGB2 326 aa13.11□□□□□ -0.31
PABPC4-202ENST00000372857 SERTAD4Q9NUC0 356 aa13.11□□□□□ -0.31
PABPC4-202ENST00000372857 TRGV10A0A0A0MS01 117 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 TRBV9A0A0B4J1U6 114 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 TRAV3A0A0B4J244 114 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 CA1P00915 261 aaPredicted RBP13.1□□□□□ -0.31
PABPC4-202ENST00000372857 OR10J3Q5JRS4 329 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 ATP1A1-AS1Q5TC04 95 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 Q8IYB0 196 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 OR4A16Q8NH70 328 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 TSKUQ8WUA8 353 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 BORCS7Q96B45 105 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 C1orf159Q96HA4 380 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 DCTN5Q9BTE1 182 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 COX11Q9Y6N1 276 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 HELTA6NFD8 242 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 C9JCJ5 164 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 CIDEAO60543 219 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 TCTEX1D1Q8N7M0 179 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 STPG3Q8N7X2 389 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 PRO3102Q9H379 93 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 TP73-AS1Q9UF72 201 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 RNF24Q9Y225 148 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 LOC105371242A0A075B767 164 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 OOEPA6NGQ2 149 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 K7EP13 123 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 CYC1P08574 325 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 ZNF738Q8NE65 137 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 COQ2Q96H96 371 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 CLEC7AQ9BXN2 247 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 CDC42EP3Q9UKI2 254 aa13.1□□□□□ -0.31
PABPC4-202ENST00000372857 RIF1Q5UIP0 2472 aaKnown RBP13.09□□□□□ -0.31
PABPC4-202ENST00000372857 SMG1Q96Q15 3661 aaKnown RBP13.09□□□□□ -0.31
PABPC4-202ENST00000372857 CELA3BP08861 270 aa13.09□□□□□ -0.31
PABPC4-202ENST00000372857 MGST1P10620 155 aaKnown RBP13.09□□□□□ -0.31
PABPC4-202ENST00000372857 FOXF2Q12947 444 aa13.09□□□□□ -0.31
PABPC4-202ENST00000372857 WDR73Q6P4I2 378 aa13.09□□□□□ -0.31
PABPC4-202ENST00000372857 MIR17HGQ75NE6 70 aa13.09□□□□□ -0.31
PABPC4-202ENST00000372857 S100A7AQ86SG5 101 aa13.09□□□□□ -0.31
PABPC4-202ENST00000372857 MDP1Q86V88 176 aa13.09□□□□□ -0.31
PABPC4-202ENST00000372857 C1orf210Q8IVY1 113 aa13.09□□□□□ -0.31
PABPC4-202ENST00000372857 KLHDC1Q8N7A1 406 aa13.09□□□□□ -0.31
PABPC4-202ENST00000372857 C11orf52Q96A22 123 aa13.09□□□□□ -0.31
PABPC4-202ENST00000372857 CD46P15529 392 aa13.09□□□□□ -0.31
PABPC4-202ENST00000372857 MAGEA5P43359 124 aa13.09□□□□□ -0.31
PABPC4-202ENST00000372857 RHOBP62745 196 aa13.09□□□□□ -0.31
PABPC4-202ENST00000372857 PSG5Q15238 335 aa13.09□□□□□ -0.31
PABPC4-202ENST00000372857 OR1C1Q15619 314 aa13.09□□□□□ -0.31
PABPC4-202ENST00000372857 PRR31Q5SQ13 230 aa13.09□□□□□ -0.31
PABPC4-202ENST00000372857 STUMQ69YW2 141 aa13.09□□□□□ -0.31
PABPC4-202ENST00000372857 DEFB123Q8N688 67 aa13.09□□□□□ -0.31
PABPC4-202ENST00000372857 BET1LQ9NYM9 111 aa13.09□□□□□ -0.31
PABPC4-202ENST00000372857 ICE1Q9Y2F5 2266 aa13.08□□□□□ -0.31
PABPC4-202ENST00000372857 SAA2-SAA4A0A096LPE2 208 aa13.08□□□□□ -0.32
PABPC4-202ENST00000372857 AHRRA9YTQ3 701 aa13.08□□□□□ -0.32
PABPC4-202ENST00000372857 CER1O95813 267 aa13.08□□□□□ -0.32
PABPC4-202ENST00000372857 MT-ND6P03923 174 aa13.08□□□□□ -0.32
PABPC4-202ENST00000372857 Q56UQ5 140 aa13.08□□□□□ -0.32
PABPC4-202ENST00000372857 NHLRC2Q8NBF2 726 aa13.08□□□□□ -0.32
PABPC4-202ENST00000372857 OR13A1Q8NGR1 328 aa13.08□□□□□ -0.32
PABPC4-202ENST00000372857 Q8TCH9 128 aa13.08□□□□□ -0.32
PABPC4-202ENST00000372857 GCM1Q9NP62 436 aa13.08□□□□□ -0.32
PABPC4-202ENST00000372857 PRSS46E5RG02 174 aa13.08□□□□□ -0.32
PABPC4-202ENST00000372857 GFRA3O60609 400 aa13.08□□□□□ -0.32
PABPC4-202ENST00000372857 CLUHP3Q96NS8 147 aa13.08□□□□□ -0.32
PABPC4-202ENST00000372857 SLC35D1Q9NTN3 355 aa13.08□□□□□ -0.32
PABPC4-202ENST00000372857 SH3BGRL2Q9UJC5 107 aa13.08□□□□□ -0.32
PABPC4-202ENST00000372857 METRNQ9UJH8 293 aa13.08□□□□□ -0.32
PABPC4-202ENST00000372857 M0QZ24 198 aa13.07□□□□□ -0.32
PABPC4-202ENST00000372857 C6orf15Q6UXA7 325 aaPredicted RBP13.07□□□□□ -0.32
PABPC4-202ENST00000372857 SMIM15Q7Z3B0 74 aa13.07□□□□□ -0.32
PABPC4-202ENST00000372857 ZNF439Q8NDP4 499 aa13.07□□□□□ -0.32
PABPC4-202ENST00000372857 HSD17B10Q99714 261 aaKnown RBP13.07□□□□□ -0.32
PABPC4-202ENST00000372857 MMP23AO75900 390 aa13.07□□□□□ -0.32
PABPC4-202ENST00000372857 MT-CO2P00403 227 aa13.07□□□□□ -0.32
PABPC4-202ENST00000372857 AMY1AP04745 511 aa13.07□□□□□ -0.32
PABPC4-202ENST00000372857 HOXC12P31275 282 aa13.07□□□□□ -0.32
PABPC4-202ENST00000372857 VDAC2P45880 294 aaPredicted RBP13.07□□□□□ -0.32
PABPC4-202ENST00000372857 RELBQ01201 579 aa13.07□□□□□ -0.32
PABPC4-202ENST00000372857 SLAQ13239 276 aa13.07□□□□□ -0.32
PABPC4-202ENST00000372857 SSBP3Q9BWW4 388 aaPredicted RBP13.07□□□□□ -0.32
PABPC4-202ENST00000372857 GSX1Q9H4S2 264 aaPredicted RBP13.07□□□□□ -0.32
PABPC4-202ENST00000372857 PTPRBP23467 1997 aa13.07□□□□□ -0.32
PABPC4-202ENST00000372857 A0A1W2PNU3 283 aaPredicted RBP13.07□□□□□ -0.32
PABPC4-202ENST00000372857 PROP1O75360 226 aa13.07□□□□□ -0.32
PABPC4-202ENST00000372857 APCSP02743 223 aa13.07□□□□□ -0.32
PABPC4-202ENST00000372857 DUSP3P51452 185 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms