RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 hDV102S1A0JD36 115 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 OR2T8A6NH00 312 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.48□□□□□ -1.69
ATG4A-204ENST00000372246 FCGR3BO75015 233 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 MRPL33O75394 65 aaKnown RBP4.48□□□□□ -1.69
ATG4A-204ENST00000372246 KLF7O75840 302 aaPredicted RBP4.48□□□□□ -1.69
ATG4A-204ENST00000372246 WISP2O76076 250 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 VAMP5O95183 116 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 PSG1P11464 419 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 COX6A1P12074 109 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 S100GP29377 79 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 GABRA2P47869 451 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 SSR4P51571 173 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 ZNF138P52744 262 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 LGALS4P56470 323 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 UBE2NP61088 152 aaKnown RBP4.48□□□□□ -1.69
ATG4A-204ENST00000372246 YPEL3P61236 119 aaPredicted RBP4.48□□□□□ -1.69
ATG4A-204ENST00000372246 RPL8P62917 257 aaKnown RBP4.48□□□□□ -1.69
ATG4A-204ENST00000372246 TNXAQ16473 311 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 LDLRAD2Q5SZI1 272 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 MORN5Q5VZ52 161 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 EBLN2Q6P2I7 272 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 H2BFWTQ7Z2G1 175 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 RPS19BP1Q86WX3 136 aaKnown RBP4.48□□□□□ -1.69
ATG4A-204ENST00000372246 SCCPDHQ8NBX0 429 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 LSM10Q969L4 123 aaKnown RBP4.48□□□□□ -1.69
ATG4A-204ENST00000372246 CSTL1Q9H114 145 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 TECRQ9NZ01 308 aaKnown RBP4.48□□□□□ -1.69
ATG4A-204ENST00000372246 CLCF1Q9UBD9 225 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 ABCA1O95477 2261 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 GPR179Q6PRD1 2367 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 TRAV5A0A0B4J249 113 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 NKX6-3A6NJ46 265 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 CORTO00230 105 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 BMPR1BO00238 502 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 CA2P00918 260 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 TSPOP30536 169 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 CAMPP49913 170 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 FOXA3P55318 350 aaPredicted RBP4.48□□□□□ -1.69
ATG4A-204ENST00000372246 NHLH1Q02575 133 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 FOXL1Q12952 345 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 MPV17L2Q567V2 206 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 CENPWQ5EE01 88 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 GDF5OSQ5U4N7 250 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 LYSMD4Q5XG99 296 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 LEMD1Q68G75 181 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 PRR27Q6MZM9 219 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 SPSB4Q96A44 273 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 NUDT11Q96G61 164 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 LIN7CQ9NUP9 197 aaKnown RBP4.48□□□□□ -1.69
ATG4A-204ENST00000372246 V9GYV3 84 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 ROS1P08922 2347 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 RP1L1Q8IWN7 2480 aaPredicted RBP4.48□□□□□ -1.69
ATG4A-204ENST00000372246 TET2Q6N021 2002 aaPredicted RBP4.48□□□□□ -1.69
ATG4A-204ENST00000372246 CADP27708 2225 aa4.48□□□□□ -1.69
ATG4A-204ENST00000372246 LY6G6EA0A0G2JKS1 128 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 LRP5LA4QPB2 252 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 DPRXA6NFQ7 191 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 H3BTX0 84 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 VENTXO95231 258 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 HBZP02008 142 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 LIPFP07098 398 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 IGLL1P15814 213 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 IGFBP2P18065 325 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 RIPPLY3P57055 190 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 ARF6P62330 175 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 SELENOTP62341 195 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 VAMP3Q15836 100 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 PRAMEF6Q5VXH4 476 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 VWA1Q6PCB0 445 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 ZNF497Q6ZNH5 498 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 TMEM136Q6ZRR5 245 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 LINC00696Q6ZRV3 163 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 Q6ZS49 121 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 SPEM1Q8N4L4 309 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 OR13A1Q8NGR1 328 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 TSKUQ8WUA8 353 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 EAF1Q96JC9 268 aaPredicted RBP4.47□□□□□ -1.69
ATG4A-204ENST00000372246 GGTLC1Q9BX51 225 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 HEYLQ9NQ87 328 aaPredicted RBP4.47□□□□□ -1.69
ATG4A-204ENST00000372246 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.47□□□□□ -1.69
ATG4A-204ENST00000372246 ZNF586Q9NXT0 402 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 IL36BQ9NZH7 164 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 CDC42EP3Q9UKI2 254 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 U3KQA8 63 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 NCOR1O75376 2440 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 PI4KAP42356 2102 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 PATE3B3GLJ2 98 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 TMPRSS2O15393 492 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 KLK10O43240 276 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 SAP30O75446 220 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 PLAUP00749 431 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 IGLV3-19P01714 112 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 GCHFRP30047 84 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 PSG5Q15238 335 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 EFNB3Q15768 340 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 ZNF718Q3SXZ3 478 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 PDLIM3Q53GG5 364 aaPredicted RBP4.47□□□□□ -1.69
ATG4A-204ENST00000372246 OR52E5Q8NH55 327 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 COQ2Q96H96 371 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms