RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 Q5PR19 223 aa13.47□□□□□ -0.25
PHGDH-202ENST00000369409 COMMD7Q86VX2 200 aa13.47□□□□□ -0.25
PHGDH-202ENST00000369409 OR10W1Q8NGF6 305 aa13.47□□□□□ -0.25
PHGDH-202ENST00000369409 PINX1Q96BK5 328 aaKnown RBP13.47□□□□□ -0.25
PHGDH-202ENST00000369409 RNF5Q99942 180 aa13.47□□□□□ -0.25
PHGDH-202ENST00000369409 FBXL15Q9H469 300 aa13.47□□□□□ -0.25
PHGDH-202ENST00000369409 IGHV3OR16-10A0A075B7F0 116 aa13.46□□□□□ -0.25
PHGDH-202ENST00000369409 E7EUB6 86 aa13.46□□□□□ -0.25
PHGDH-202ENST00000369409 TEX46H3BTG2 121 aa13.46□□□□□ -0.25
PHGDH-202ENST00000369409 MOSP00540 346 aa13.46□□□□□ -0.25
PHGDH-202ENST00000369409 F2RL1P55085 397 aa13.46□□□□□ -0.25
PHGDH-202ENST00000369409 PRSS8Q16651 343 aa13.46□□□□□ -0.25
PHGDH-202ENST00000369409 MMD2Q8IY49 270 aa13.46□□□□□ -0.25
PHGDH-202ENST00000369409 AJUBAQ96IF1 538 aa13.46□□□□□ -0.25
PHGDH-202ENST00000369409 TMEM147Q9BVK8 224 aa13.46□□□□□ -0.25
PHGDH-202ENST00000369409 AUP1Q9Y679 476 aa13.46□□□□□ -0.25
PHGDH-202ENST00000369409 GCN1Q92616 2671 aaKnown RBP13.46□□□□□ -0.25
PHGDH-202ENST00000369409 CGB1A6NKQ9 187 aa13.46□□□□□ -0.26
PHGDH-202ENST00000369409 ZNF705EA8MWA4 302 aaPredicted RBP13.46□□□□□ -0.26
PHGDH-202ENST00000369409 CA2P00918 260 aa13.46□□□□□ -0.26
PHGDH-202ENST00000369409 SULT1A2P50226 295 aa13.46□□□□□ -0.26
PHGDH-202ENST00000369409 RAB11AP62491 216 aa13.46□□□□□ -0.26
PHGDH-202ENST00000369409 TNXAQ16473 311 aa13.46□□□□□ -0.26
PHGDH-202ENST00000369409 RUSC1-AS1Q66K80 236 aa13.46□□□□□ -0.26
PHGDH-202ENST00000369409 ETV3LQ6ZN32 361 aa13.46□□□□□ -0.26
PHGDH-202ENST00000369409 TMEM182Q6ZP80 229 aaPredicted RBP13.46□□□□□ -0.26
PHGDH-202ENST00000369409 PIP4P2Q8N4L2 257 aa13.46□□□□□ -0.26
PHGDH-202ENST00000369409 MAPK1IP1LQ8NDC0 245 aa13.46□□□□□ -0.26
PHGDH-202ENST00000369409 LRRC20Q8TCA0 184 aa13.46□□□□□ -0.26
PHGDH-202ENST00000369409 MALSU1Q96EH3 234 aa13.46□□□□□ -0.26
PHGDH-202ENST00000369409 EAF1Q96JC9 268 aaPredicted RBP13.46□□□□□ -0.26
PHGDH-202ENST00000369409 HIF1ANQ9NWT6 349 aa13.46□□□□□ -0.26
PHGDH-202ENST00000369409 RNF223E7ERA6 249 aa13.45□□□□□ -0.26
PHGDH-202ENST00000369409 SCAF4O95104 1147 aaKnown RBP13.45□□□□□ -0.26
PHGDH-202ENST00000369409 PLGLAQ15195 96 aa13.45□□□□□ -0.26
PHGDH-202ENST00000369409 ATP6V1FQ16864 119 aa13.45□□□□□ -0.26
PHGDH-202ENST00000369409 PPP1R27Q86WC6 154 aa13.45□□□□□ -0.26
PHGDH-202ENST00000369409 SCGB1C1Q8TD33 95 aa13.45□□□□□ -0.26
PHGDH-202ENST00000369409 GNPNAT1Q96EK6 184 aaPredicted RBP13.45□□□□□ -0.26
PHGDH-202ENST00000369409 CITED4Q96RK1 184 aa13.45□□□□□ -0.26
PHGDH-202ENST00000369409 UQCC1Q9NVA1 299 aa13.45□□□□□ -0.26
PHGDH-202ENST00000369409 SVEP1Q4LDE5 3571 aa13.45□□□□□ -0.26
PHGDH-202ENST00000369409 A0A1B0GW64 132 aa13.44□□□□□ -0.26
PHGDH-202ENST00000369409 NBR2O15453 112 aa13.44□□□□□ -0.26
PHGDH-202ENST00000369409 ACTL6BO94805 426 aa13.44□□□□□ -0.26
PHGDH-202ENST00000369409 IFNA4P05014 189 aa13.44□□□□□ -0.26
PHGDH-202ENST00000369409 GNB1P62873 340 aa13.44□□□□□ -0.26
PHGDH-202ENST00000369409 LRRC75BQ2VPJ9 315 aa13.44□□□□□ -0.26
PHGDH-202ENST00000369409 OR2G3Q8NGZ4 309 aa13.44□□□□□ -0.26
PHGDH-202ENST00000369409 OR2T10Q8NGZ9 312 aa13.44□□□□□ -0.26
PHGDH-202ENST00000369409 C1orf159Q96HA4 380 aa13.44□□□□□ -0.26
PHGDH-202ENST00000369409 RSG1Q9BU20 258 aa13.44□□□□□ -0.26
PHGDH-202ENST00000369409 WDR61Q9GZS3 305 aaKnown RBP13.44□□□□□ -0.26
PHGDH-202ENST00000369409 C7orf69Q9H7B7 122 aa13.44□□□□□ -0.26
PHGDH-202ENST00000369409 TRAV20A0A0B4J274 112 aa13.44□□□□□ -0.26
PHGDH-202ENST00000369409 IGHV1-69DA0A0B4J2H0 117 aa13.44□□□□□ -0.26
PHGDH-202ENST00000369409 A0A1W2PN81 502 aa13.44□□□□□ -0.26
PHGDH-202ENST00000369409 PRSS46E5RG02 174 aa13.44□□□□□ -0.26
PHGDH-202ENST00000369409 IGHV1-69P01742 117 aa13.44□□□□□ -0.26
PHGDH-202ENST00000369409 CHRNA7P36544 502 aa13.44□□□□□ -0.26
PHGDH-202ENST00000369409 MBD6Q96DN6 1003 aa13.44□□□□□ -0.26
PHGDH-202ENST00000369409 KIAA1456Q9P272 454 aa13.44□□□□□ -0.26
PHGDH-202ENST00000369409 PFDN2Q9UHV9 154 aa13.44□□□□□ -0.26
PHGDH-202ENST00000369409 RPL27AP46776 148 aaKnown RBP13.43□□□□□ -0.26
PHGDH-202ENST00000369409 COMPP49747 757 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-202ENST00000369409 BRD3OSQ6XYD6 125 aa13.43□□□□□ -0.26
PHGDH-202ENST00000369409 LINC01356Q8N9X3 169 aa13.43□□□□□ -0.26
PHGDH-202ENST00000369409 PARD6GQ9BYG4 376 aaPredicted RBP13.43□□□□□ -0.26
PHGDH-202ENST00000369409 NDUFA3O95167 84 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 IGHV4-38-2P0DP08 117 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 RNASE2P10153 161 aaKnown RBP13.42□□□□□ -0.26
PHGDH-202ENST00000369409 MAS1LP35410 378 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 SNCAP37840 140 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 ERHP84090 104 aaKnown RBP13.42□□□□□ -0.26
PHGDH-202ENST00000369409 WT1-ASQ06250 92 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 LOXL1Q08397 574 aaPredicted RBP13.42□□□□□ -0.26
PHGDH-202ENST00000369409 VWC2Q2TAL6 325 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 TUSC1Q2TAM9 212 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 BSXQ3C1V8 233 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 Q6ZRG5 221 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 NPBQ8NG41 125 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 TAF15Q92804 592 aaKnown RBP eCLIP13.42□□□□□ -0.26
PHGDH-202ENST00000369409 MED9Q9NWA0 146 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 SMCO3A2RU48 225 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 INS-IGF2F8WCM5 200 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 FCN1O00602 326 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 PRH1P02810 166 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 TMEM11P17152 192 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 FGF7P21781 194 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 SSBP2P81877 361 aaPredicted RBP13.42□□□□□ -0.26
PHGDH-202ENST00000369409 PXDC1Q5TGL8 231 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 KRTAP1-3Q8IUG1 177 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 Q8N6K4 173 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 SAT2Q96F10 170 aaPredicted RBP13.42□□□□□ -0.26
PHGDH-202ENST00000369409 Q96MF0 132 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 REG4Q9BYZ8 158 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 FBXO7Q9Y3I1 522 aa13.42□□□□□ -0.26
PHGDH-202ENST00000369409 CELSR1Q9NYQ6 3014 aa13.41□□□□□ -0.26
PHGDH-202ENST00000369409 OR13C7P0DN81 318 aa13.41□□□□□ -0.26
PHGDH-202ENST00000369409 GATA3P23771 443 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms