RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 FAM90A9PA6NNJ1 464 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 APCSP02743 223 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 TCL1AP56279 114 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 PDZD11Q5EBL8 140 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 MSGN1A6NI15 193 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 OR9G9P0C7N8 305 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 STHQ8IWL8 128 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 FOXA2Q9Y261 457 aaPredicted RBP8.25□□□□□ -1.09
SCAF11-202ENST00000369367 CA2P00918 260 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 CLEC9AQ6UXN8 241 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 HEPN1Q6WQI6 88 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 AQP10Q96PS8 301 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 CSN3P07498 182 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 ZP1P60852 638 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 ZNF497Q6ZNH5 498 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 TCF24Q7RTU0 167 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 LRP11Q86VZ4 500 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 KIR2DL4Q99706 377 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 RSG1Q9BU20 258 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 C5orf66Q9H5L9 145 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 CCL3L1P16619 93 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 SRSF7Q16629 238 aaKnown RBP eCLIP8.25□□□□□ -1.09
SCAF11-202ENST00000369367 IBA57Q5T440 356 aaKnown RBP8.25□□□□□ -1.09
SCAF11-202ENST00000369367 C12orf54Q6X4T0 127 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 SRSF12Q8WXF0 261 aaKnown RBP8.25□□□□□ -1.09
SCAF11-202ENST00000369367 RTN4RQ9BZR6 473 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 CRIM1Q9NZV1 1036 aa8.25□□□□□ -1.09
SCAF11-202ENST00000369367 TRBV6-7A0A0A0MS04 114 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 A6NNC1 897 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 PLAURQ03405 335 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 DTX1Q86Y01 620 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 CLRN3Q8NCR9 226 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 MARVELD3Q96A59 401 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 DPH3Q96FX2 82 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 PCNX2A6NKB5 2137 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 CLEC19AQ6UXS0 136 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 RAB24Q969Q5 203 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 ZNF257Q9Y2Q1 563 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 A0A1W2PRX2 142 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 C1QTNF9BB2RNN3 333 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 C1QTNF9P0C862 333 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 MFAP2P55001 183 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 MORN2Q502X0 79 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 LDLRAD2Q5SZI1 272 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 UPK2O00526 184 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 CKS2P33552 79 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 TMEM183BQ1AE95 376 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 DTX2Q86UW9 622 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 CGB1A6NKQ9 187 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 PLAUP00749 431 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 MRPL54Q6P161 138 aaKnown RBP8.24□□□□□ -1.09
SCAF11-202ENST00000369367 TMEM167AQ8TBQ9 72 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 WNT10AQ9GZT5 417 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 J3QLI3 93 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 VKORC1L1Q8N0U8 176 aa8.24□□□□□ -1.09
SCAF11-202ENST00000369367 RPUSD1Q9UJJ7 312 aaKnown RBP8.24□□□□□ -1.09
SCAF11-202ENST00000369367 F12P00748 615 aaPredicted RBP8.23□□□□□ -1.09
SCAF11-202ENST00000369367 HSPB1P04792 205 aaKnown RBP8.23□□□□□ -1.09
SCAF11-202ENST00000369367 DHRS11Q6UWP2 260 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 TMEM101Q96IK0 257 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 KCNS1Q96KK3 526 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 CXCL3P19876 107 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 LEPP41159 167 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 LINC00305Q7Z4B0 112 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 DUX3Q96PT4 197 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 NPFFO15130 113 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 FOSL1P15407 271 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 IGFBP3P17936 291 aaPredicted RBP8.23□□□□□ -1.09
SCAF11-202ENST00000369367 ZNF660Q6AZW8 331 aaPredicted RBP8.23□□□□□ -1.09
SCAF11-202ENST00000369367 TMEM88Q6PEY1 159 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 TRAV41A0A0B4J266 112 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 RRHO14718 337 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 PTBP3O95758 552 aaKnown RBP8.23□□□□□ -1.09
SCAF11-202ENST00000369367 MST1P26927 711 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 MAP1LC3AQ9H492 121 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 SAA2-SAA4A0A096LPE2 208 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 MED19A0JLT2 244 aaPredicted RBP8.23□□□□□ -1.09
SCAF11-202ENST00000369367 HLA-DQA1P01909 254 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 SAA2P0DJI9 122 aaPredicted RBP8.23□□□□□ -1.09
SCAF11-202ENST00000369367 HNRNPA3P51991 378 aaKnown RBP8.23□□□□□ -1.09
SCAF11-202ENST00000369367 NHLRC3Q5JS37 347 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 ROS1P08922 2347 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 TMEM218A2RU14 115 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 ASIPP42127 132 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 GAS1P54826 345 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 Q5PR19 223 aa8.23□□□□□ -1.09
SCAF11-202ENST00000369367 ZNF56Q15929 161 aa8.22□□□□□ -1.09
SCAF11-202ENST00000369367 RNF166Q96A37 237 aaPredicted RBP8.22□□□□□ -1.09
SCAF11-202ENST00000369367 NBEAP1P0C6P0 100 aa8.22□□□□□ -1.09
SCAF11-202ENST00000369367 SPSB3Q6PJ21 355 aa8.22□□□□□ -1.09
SCAF11-202ENST00000369367 M0R143 59 aa8.22□□□□□ -1.09
SCAF11-202ENST00000369367 ZNF250P15622 560 aa8.22□□□□□ -1.09
SCAF11-202ENST00000369367 RHOGP84095 191 aa8.22□□□□□ -1.09
SCAF11-202ENST00000369367 TOMM20LQ6UXN7 152 aa8.22□□□□□ -1.09
SCAF11-202ENST00000369367 C1QL2Q7Z5L3 287 aa8.22□□□□□ -1.09
SCAF11-202ENST00000369367 OR11H7Q8NGC8 314 aa8.22□□□□□ -1.09
SCAF11-202ENST00000369367 TRAF4Q9BUZ4 470 aaPredicted RBP8.22□□□□□ -1.09
SCAF11-202ENST00000369367 TIMM23O14925 209 aa8.22□□□□□ -1.09
SCAF11-202ENST00000369367 VMO1Q7Z5L0 202 aa8.22□□□□□ -1.09
SCAF11-202ENST00000369367 FUT9Q9Y231 359 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms