RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 DLL1O00548 723 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 MOSP00540 346 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 IGKV1-39P01597 117 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 IGKV1D-39P04432 117 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 WT1P19544 449 aaPredicted RBP7.03□□□□□ -1.28
PTPRK-206ENST00000368215 FAM222BQ8WU58 562 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 RASL11BQ9BPW5 248 aa7.03□□□□□ -1.28
PTPRK-206ENST00000368215 CREBBPQ92793 2442 aa7.02□□□□□ -1.28
PTPRK-206ENST00000368215 A0A087X0M5 115 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 A0A1B0GX30 115 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 CXCL1P09341 107 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 USF1P22415 310 aaPredicted RBP7.02□□□□□ -1.29
PTPRK-206ENST00000368215 CEACAM3P40198 252 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 PAX9P55771 341 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 ERVFRD-1P60508 538 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 OR5I1Q13606 314 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 OR9G1Q8NH87 305 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 SLC17A3O00476 420 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 GNG7O60262 68 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 RPL29P47914 159 aaKnown RBP7.02□□□□□ -1.29
PTPRK-206ENST00000368215 RPL23P62829 140 aaKnown RBP7.02□□□□□ -1.29
PTPRK-206ENST00000368215 KIAA1644Q3SXP7 199 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 MBNL2Q5VZF2 373 aaKnown RBP7.02□□□□□ -1.29
PTPRK-206ENST00000368215 SPSB3Q6PJ21 355 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 DOLPP1Q86YN1 238 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 MUC15Q8N387 334 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 RNF2Q99496 336 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 MALRD1Q5VYJ5 2156 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 A0A0C4DFX4 3053 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 PPIAL4CA0A0B4J2A2 164 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 GRIFINA4D1Z8 144 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 WISP2O76076 250 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 SAA1P0DJI8 122 aaPredicted RBP7.02□□□□□ -1.29
PTPRK-206ENST00000368215 PPIAL4GP0DN37 164 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 ELOBQ15370 118 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 MIR17HGQ75NE6 70 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 PERPQ96FX8 193 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 CHRDL1Q9BU40 450 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 ELOVL1Q9BW60 279 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 TUBA4BQ9H853 241 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 TNFRSF19Q9NS68 423 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 COA4Q9NYJ1 87 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 RALYQ9UKM9 306 aaKnown RBP7.02□□□□□ -1.29
PTPRK-206ENST00000368215 RNF115Q9Y4L5 304 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 SPG11Q96JI7 2443 aa7.02□□□□□ -1.29
PTPRK-206ENST00000368215 ACAA1P09110 424 aaPredicted RBP7.01□□□□□ -1.29
PTPRK-206ENST00000368215 MC5RP33032 325 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 NUBP1P53384 320 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 OR1P1Q8NH06 330 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 DNAJC4Q9NNZ3 241 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 MBNL3Q9NUK0 354 aaKnown RBP7.01□□□□□ -1.29
PTPRK-206ENST00000368215 PRUNE2Q8WUY3 3088 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 C8orf88P0DMB2 117 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 HIST1H1BP16401 226 aaKnown RBP7.01□□□□□ -1.29
PTPRK-206ENST00000368215 HLA-DRB5Q30154 266 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 TMEM14EPQ6UXP3 125 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 MBD3L1Q8WWY6 194 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 GGACTQ9BVM4 153 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 ZNF430Q9H8G1 570 aaPredicted RBP7.01□□□□□ -1.29
PTPRK-206ENST00000368215 ZNRD1Q9P1U0 126 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 C20orf202A1L168 122 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 HYPMO75409 117 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 C1QTNF9P0C862 333 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 SRP14P37108 136 aaKnown RBP7.01□□□□□ -1.29
PTPRK-206ENST00000368215 MFAP2P55001 183 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 PNKDQ8N490 385 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 OR2D3Q8NGH3 330 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 VAMP8Q9BV40 100 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 TMUB1Q9BVT8 246 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 PGPA6NDG6 321 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 ZNF785A8K8V0 405 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 CSN3P07498 182 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 ZNF137PP52743 207 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 MMD2Q8IY49 270 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 OR10W1Q8NGF6 305 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 SFRP2Q96HF1 295 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 SSBP3Q9BWW4 388 aaPredicted RBP7.01□□□□□ -1.29
PTPRK-206ENST00000368215 AAMDCQ9H7C9 122 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 DCAF16Q9NXF7 216 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 ELOVL5Q9NYP7 299 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 WDR83OSQ9Y284 106 aa7.01□□□□□ -1.29
PTPRK-206ENST00000368215 PRRC2CQ9Y520 2896 aaKnown RBP7.01□□□□□ -1.29
PTPRK-206ENST00000368215 CDH23Q9H251 3354 aa7□□□□□ -1.29
PTPRK-206ENST00000368215 TRAV34A0A0B4J273 112 aa7□□□□□ -1.29
PTPRK-206ENST00000368215 C15orf61A6NNL5 157 aa7□□□□□ -1.29
PTPRK-206ENST00000368215 CBLN1P23435 193 aa7□□□□□ -1.29
PTPRK-206ENST00000368215 ARL3P36405 182 aa7□□□□□ -1.29
PTPRK-206ENST00000368215 C10orf55Q5SWW7 151 aa7□□□□□ -1.29
PTPRK-206ENST00000368215 IBA57Q5T440 356 aaKnown RBP7□□□□□ -1.29
PTPRK-206ENST00000368215 HEPN1Q6WQI6 88 aa7□□□□□ -1.29
PTPRK-206ENST00000368215 TMEM186Q96B77 213 aa7□□□□□ -1.29
PTPRK-206ENST00000368215 NOL4LQ96MY1 436 aaPredicted RBP7□□□□□ -1.29
PTPRK-206ENST00000368215 AP1S3Q96PC3 154 aa7□□□□□ -1.29
PTPRK-206ENST00000368215 S4R3C0 116 aa7□□□□□ -1.29
PTPRK-206ENST00000368215 MED12LQ86YW9 2145 aa7□□□□□ -1.29
PTPRK-206ENST00000368215 A0A087WWC5 75 aa7□□□□□ -1.29
PTPRK-206ENST00000368215 COL8A1P27658 744 aa7□□□□□ -1.29
PTPRK-206ENST00000368215 ERVK11-1P61568 191 aa7□□□□□ -1.29
PTPRK-206ENST00000368215 ZNF596Q8TC21 504 aa7□□□□□ -1.29
PTPRK-206ENST00000368215 PPP1R14DQ9NXH3 145 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms