RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 FRZBQ92765 325 aa10.37□□□□□ -0.75
VAMP4-202ENST00000367740 ATP6V0BQ99437 205 aa10.37□□□□□ -0.75
VAMP4-202ENST00000367740 GINS4Q9BRT9 223 aa10.37□□□□□ -0.75
VAMP4-202ENST00000367740 C21orf62Q9NYP8 219 aa10.37□□□□□ -0.75
VAMP4-202ENST00000367740 CLEC2DQ9UHP7 191 aa10.37□□□□□ -0.75
VAMP4-202ENST00000367740 EI24O14681 340 aa10.36□□□□□ -0.75
VAMP4-202ENST00000367740 FCGR3AP08637 254 aa10.36□□□□□ -0.75
VAMP4-202ENST00000367740 FCGR1AP12314 374 aa10.36□□□□□ -0.75
VAMP4-202ENST00000367740 DCKP27707 260 aa10.36□□□□□ -0.75
VAMP4-202ENST00000367740 BRWD1-AS2P59051 145 aa10.36□□□□□ -0.75
VAMP4-202ENST00000367740 PLAC9Q5JTB6 97 aa10.36□□□□□ -0.75
VAMP4-202ENST00000367740 LRRTM1Q86UE6 522 aa10.36□□□□□ -0.75
VAMP4-202ENST00000367740 GDPD1Q8N9F7 314 aa10.36□□□□□ -0.75
VAMP4-202ENST00000367740 UBAC2Q8NBM4 344 aa10.36□□□□□ -0.75
VAMP4-202ENST00000367740 ZNF485Q8NCK3 441 aa10.36□□□□□ -0.75
VAMP4-202ENST00000367740 MAFIPQ8WZ33 124 aa10.36□□□□□ -0.75
VAMP4-202ENST00000367740 CENPNQ96H22 339 aaPredicted RBP10.36□□□□□ -0.75
VAMP4-202ENST00000367740 URM1Q9BTM9 101 aaKnown RBP10.36□□□□□ -0.75
VAMP4-202ENST00000367740 TMED3Q9Y3Q3 217 aa10.36□□□□□ -0.75
VAMP4-202ENST00000367740 ORC6Q9Y5N6 252 aa10.36□□□□□ -0.75
VAMP4-202ENST00000367740 TRAV2A0A0B4J234 112 aa10.35□□□□□ -0.75
VAMP4-202ENST00000367740 KNCNA6PVL3 124 aa10.35□□□□□ -0.75
VAMP4-202ENST00000367740 DNASE2O00115 360 aaPredicted RBP10.35□□□□□ -0.75
VAMP4-202ENST00000367740 BPNT1O95861 308 aa10.35□□□□□ -0.75
VAMP4-202ENST00000367740 IGLV2-14P01704 120 aa10.35□□□□□ -0.75
VAMP4-202ENST00000367740 CTSGP08311 255 aa10.35□□□□□ -0.75
VAMP4-202ENST00000367740 SPART-AS1P0CW21 52 aa10.35□□□□□ -0.75
VAMP4-202ENST00000367740 SMN1Q16637 294 aaKnown RBP10.35□□□□□ -0.75
VAMP4-202ENST00000367740 DNAL1Q4LDG9 190 aa10.35□□□□□ -0.75
VAMP4-202ENST00000367740 TMEM88Q6PEY1 159 aa10.35□□□□□ -0.75
VAMP4-202ENST00000367740 LILRB2Q8N423 598 aa10.35□□□□□ -0.75
VAMP4-202ENST00000367740 OR10W1Q8NGF6 305 aa10.35□□□□□ -0.75
VAMP4-202ENST00000367740 SCARB1Q8WTV0 552 aa10.35□□□□□ -0.75
VAMP4-202ENST00000367740 ST8SIA2Q92186 375 aa10.35□□□□□ -0.75
VAMP4-202ENST00000367740 DGCR14Q96DF8 476 aaKnown RBP10.35□□□□□ -0.75
VAMP4-202ENST00000367740 MED4Q9NPJ6 270 aa10.35□□□□□ -0.75
VAMP4-202ENST00000367740 TRAV14DV4A0A0A6YYC5 116 aa10.34□□□□□ -0.75
VAMP4-202ENST00000367740 J3QRK9 145 aa10.34□□□□□ -0.75
VAMP4-202ENST00000367740 CDK1P06493 297 aa10.34□□□□□ -0.75
VAMP4-202ENST00000367740 MAPK3P27361 379 aaPredicted RBP10.34□□□□□ -0.75
VAMP4-202ENST00000367740 INSL4Q14641 139 aa10.34□□□□□ -0.75
VAMP4-202ENST00000367740 TIMM50Q3ZCQ8 353 aa10.34□□□□□ -0.75
VAMP4-202ENST00000367740 UBE2UQ5VVX9 321 aa10.34□□□□□ -0.75
VAMP4-202ENST00000367740 SRSF8Q9BRL6 282 aaKnown RBP10.34□□□□□ -0.75
VAMP4-202ENST00000367740 BET1LQ9NYM9 111 aa10.34□□□□□ -0.75
VAMP4-202ENST00000367740 RBMX2Q9Y388 322 aaKnown RBP10.34□□□□□ -0.75
VAMP4-202ENST00000367740 K7EIM0 57 aa10.33□□□□□ -0.76
VAMP4-202ENST00000367740 GYG2O15488 501 aa10.33□□□□□ -0.76
VAMP4-202ENST00000367740 YIF1AO95070 293 aa10.33□□□□□ -0.76
VAMP4-202ENST00000367740 CD5P06127 495 aa10.33□□□□□ -0.76
VAMP4-202ENST00000367740 HTN3P15516 51 aa10.33□□□□□ -0.76
VAMP4-202ENST00000367740 CD36P16671 472 aa10.33□□□□□ -0.76
VAMP4-202ENST00000367740 TAS2R43P59537 309 aa10.33□□□□□ -0.76
VAMP4-202ENST00000367740 RELQ04864 619 aaPredicted RBP10.33□□□□□ -0.76
VAMP4-202ENST00000367740 EIF4EBP1Q13541 118 aaPredicted RBP10.33□□□□□ -0.76
VAMP4-202ENST00000367740 Q56UQ5 140 aa10.33□□□□□ -0.76
VAMP4-202ENST00000367740 TCTEX1D2Q8WW35 142 aa10.33□□□□□ -0.76
VAMP4-202ENST00000367740 ATG101Q9BSB4 218 aa10.33□□□□□ -0.76
VAMP4-202ENST00000367740 VSIRQ9H7M9 311 aa10.33□□□□□ -0.76
VAMP4-202ENST00000367740 MDFICQ9P1T7 246 aa10.33□□□□□ -0.76
VAMP4-202ENST00000367740 KCNK7Q9Y2U2 307 aa10.33□□□□□ -0.76
VAMP4-202ENST00000367740 TRAV3A0A0B4J244 114 aa10.32□□□□□ -0.76
VAMP4-202ENST00000367740 CYB5BO43169 146 aa10.32□□□□□ -0.76
VAMP4-202ENST00000367740 ST8SIA3O43173 380 aa10.32□□□□□ -0.76
VAMP4-202ENST00000367740 HRASP01112 189 aa10.32□□□□□ -0.76
VAMP4-202ENST00000367740 APOHP02749 345 aaPredicted RBP10.32□□□□□ -0.76
VAMP4-202ENST00000367740 SERPINE2P07093 398 aa10.32□□□□□ -0.76
VAMP4-202ENST00000367740 MYL12AP19105 171 aa10.32□□□□□ -0.76
VAMP4-202ENST00000367740 EMP1P54849 157 aa10.32□□□□□ -0.76
VAMP4-202ENST00000367740 WT1-ASQ06250 92 aa10.32□□□□□ -0.76
VAMP4-202ENST00000367740 ACTL10Q5JWF8 245 aa10.32□□□□□ -0.76
VAMP4-202ENST00000367740 RBM48Q5RL73 367 aaKnown RBP10.32□□□□□ -0.76
VAMP4-202ENST00000367740 SLC25A24Q6NUK1 477 aa10.32□□□□□ -0.76
VAMP4-202ENST00000367740 MFSD4AQ8N468 514 aa10.32□□□□□ -0.76
VAMP4-202ENST00000367740 DKK2Q9UBU2 259 aa10.32□□□□□ -0.76
VAMP4-202ENST00000367740 RABAC1Q9UI14 185 aa10.32□□□□□ -0.76
VAMP4-202ENST00000367740 DIMT1Q9UNQ2 313 aaKnown RBP10.32□□□□□ -0.76
VAMP4-202ENST00000367740 WBP4O75554 376 aaKnown RBP10.31□□□□□ -0.76
VAMP4-202ENST00000367740 CD37P11049 281 aa10.31□□□□□ -0.76
VAMP4-202ENST00000367740 MRPS15P82914 257 aaKnown RBP10.31□□□□□ -0.76
VAMP4-202ENST00000367740 P2RY14Q15391 338 aa10.31□□□□□ -0.76
VAMP4-202ENST00000367740 SSX1Q16384 188 aa10.31□□□□□ -0.76
VAMP4-202ENST00000367740 HSD17B10Q99714 261 aaKnown RBP10.31□□□□□ -0.76
VAMP4-202ENST00000367740 NIPSNAP3BQ9BS92 247 aa10.31□□□□□ -0.76
VAMP4-202ENST00000367740 QTRT1Q9BXR0 403 aaKnown RBP10.31□□□□□ -0.76
VAMP4-202ENST00000367740 HRASLSQ9HDD0 168 aa10.31□□□□□ -0.76
VAMP4-202ENST00000367740 SPATA2Q9UM82 520 aa10.31□□□□□ -0.76
VAMP4-202ENST00000367740 IGKV1D-8A0A087WSZ0 117 aa10.3□□□□□ -0.76
VAMP4-202ENST00000367740 IGKV1D-13A0A0B4J2D9 117 aa10.3□□□□□ -0.76
VAMP4-202ENST00000367740 IGHV3-66A0A0C4DH42 116 aa10.3□□□□□ -0.76
VAMP4-202ENST00000367740 K7EQG2 157 aa10.3□□□□□ -0.76
VAMP4-202ENST00000367740 EIF4EP06730 217 aaKnown RBP10.3□□□□□ -0.76
VAMP4-202ENST00000367740 ZNF688P0C7X2 276 aa10.3□□□□□ -0.76
VAMP4-202ENST00000367740 OR13C7P0DN81 318 aa10.3□□□□□ -0.76
VAMP4-202ENST00000367740 IGKV1-13P0DP09 117 aa10.3□□□□□ -0.76
VAMP4-202ENST00000367740 BTF3P20290 206 aaKnown RBP10.3□□□□□ -0.76
VAMP4-202ENST00000367740 RPL11P62913 178 aaKnown RBP10.3□□□□□ -0.76
VAMP4-202ENST00000367740 GNGT1P63211 74 aa10.3□□□□□ -0.76
VAMP4-202ENST00000367740 FAM222AQ5U5X8 452 aa10.3□□□□□ -0.76
VAMP4-202ENST00000367740 ZNF773Q6PK81 442 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms