RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 FAM216AQ8WUB2 273 aa11.22□□□□□ -0.61
PRKN-205ENST00000366897 HSD17B10Q99714 261 aaKnown RBP11.22□□□□□ -0.61
PRKN-205ENST00000366897 IGFBP2P18065 325 aa11.22□□□□□ -0.61
PRKN-205ENST00000366897 VDAC2P45880 294 aaPredicted RBP11.22□□□□□ -0.61
PRKN-205ENST00000366897 ZNF134P52741 427 aa11.22□□□□□ -0.61
PRKN-205ENST00000366897 PAFAH1B2P68402 229 aa11.22□□□□□ -0.61
PRKN-205ENST00000366897 CENPWQ5EE01 88 aa11.22□□□□□ -0.61
PRKN-205ENST00000366897 WDR82Q6UXN9 313 aa11.22□□□□□ -0.61
PRKN-205ENST00000366897 CD177Q8N6Q3 437 aa11.22□□□□□ -0.61
PRKN-205ENST00000366897 ABCA1O95477 2261 aa11.21□□□□□ -0.61
PRKN-205ENST00000366897 IGHV3OR15-7A0A075B7D8 119 aa11.21□□□□□ -0.61
PRKN-205ENST00000366897 TCF21O43680 179 aa11.21□□□□□ -0.61
PRKN-205ENST00000366897 OR10J4P0C629 311 aa11.21□□□□□ -0.61
PRKN-205ENST00000366897 RPEL1Q2QD12 228 aa11.21□□□□□ -0.61
PRKN-205ENST00000366897 MAJINQ3KP22 176 aa11.21□□□□□ -0.61
PRKN-205ENST00000366897 ATP1A1-AS1Q5TC04 95 aa11.21□□□□□ -0.61
PRKN-205ENST00000366897 GCM1Q9NP62 436 aa11.21□□□□□ -0.61
PRKN-205ENST00000366897 TMEM140Q9NV12 185 aa11.21□□□□□ -0.61
PRKN-205ENST00000366897 TCF19Q9Y242 345 aa11.21□□□□□ -0.61
PRKN-205ENST00000366897 AKAP13Q12802 2813 aa11.21□□□□□ -0.61
PRKN-205ENST00000366897 PTPRBP23467 1997 aa11.21□□□□□ -0.62
PRKN-205ENST00000366897 PRSS46E5RG02 174 aa11.21□□□□□ -0.62
PRKN-205ENST00000366897 NTF3P20783 257 aa11.21□□□□□ -0.62
PRKN-205ENST00000366897 IGHV1-2P23083 117 aa11.21□□□□□ -0.62
PRKN-205ENST00000366897 RANP62826 216 aaKnown RBP11.21□□□□□ -0.62
PRKN-205ENST00000366897 PSG5Q15238 335 aa11.21□□□□□ -0.62
PRKN-205ENST00000366897 HES4Q9HCC6 221 aa11.21□□□□□ -0.62
PRKN-205ENST00000366897 SPRR3Q9UBC9 169 aa11.21□□□□□ -0.62
PRKN-205ENST00000366897 V9GYV3 84 aa11.21□□□□□ -0.62
PRKN-205ENST00000366897 M0QZK8 103 aa11.2□□□□□ -0.62
PRKN-205ENST00000366897 TIMM8AO60220 97 aaPredicted RBP11.2□□□□□ -0.62
PRKN-205ENST00000366897 C11orf42Q8N5U0 333 aa11.2□□□□□ -0.62
PRKN-205ENST00000366897 Q8N976 141 aa11.2□□□□□ -0.62
PRKN-205ENST00000366897 NRN1Q9NPD7 142 aa11.2□□□□□ -0.62
PRKN-205ENST00000366897 SERTAD4Q9NUC0 356 aa11.2□□□□□ -0.62
PRKN-205ENST00000366897 ACACBO00763 2458 aa11.2□□□□□ -0.62
PRKN-205ENST00000366897 SPINT2O43291 252 aa11.2□□□□□ -0.62
PRKN-205ENST00000366897 GPX1P07203 203 aa11.2□□□□□ -0.62
PRKN-205ENST00000366897 DUSP3P51452 185 aaPredicted RBP11.2□□□□□ -0.62
PRKN-205ENST00000366897 RELBQ01201 579 aa11.2□□□□□ -0.62
PRKN-205ENST00000366897 MRPL49Q13405 166 aaKnown RBP11.2□□□□□ -0.62
PRKN-205ENST00000366897 SPATA45Q537H7 98 aa11.2□□□□□ -0.62
PRKN-205ENST00000366897 LCN12Q6JVE5 192 aa11.2□□□□□ -0.62
PRKN-205ENST00000366897 TUBG2Q9NRH3 451 aa11.2□□□□□ -0.62
PRKN-205ENST00000366897 DMXL2Q8TDJ6 3036 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 IQCF6A8MYZ5 107 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 C9orf172C9J069 976 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 C15orf65H3BRN8 121 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 SIAH2O43255 324 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 MGST1P10620 155 aaKnown RBP11.19□□□□□ -0.62
PRKN-205ENST00000366897 RAB7AP51149 207 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 MRPS11P82912 194 aaKnown RBP11.19□□□□□ -0.62
PRKN-205ENST00000366897 FOXC1Q12948 553 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 MLANAQ16655 118 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 STPG4Q8N801 248 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 DCAF16Q9NXF7 216 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 A8MXE2 369 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 ZNF253O75346 499 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 FTH1P19P0C7X4 201 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 SRIP30626 198 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 GNG4P50150 75 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 ERVK-16P61578 105 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 CNEP1R1Q8N9A8 125 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 ZNRF1Q8ND25 227 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 LRRC29Q8WV35 223 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 SSBP3Q9BWW4 388 aaPredicted RBP11.19□□□□□ -0.62
PRKN-205ENST00000366897 ZNF586Q9NXT0 402 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 DUSP13Q9UII6 198 aa11.19□□□□□ -0.62
PRKN-205ENST00000366897 A0A1W2PNU3 283 aaPredicted RBP11.18□□□□□ -0.62
PRKN-205ENST00000366897 CA2P00918 260 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 NPVFQ9HCQ7 196 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 DNAJC4Q9NNZ3 241 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 LSM4Q9Y4Z0 139 aaKnown RBP11.18□□□□□ -0.62
PRKN-205ENST00000366897 PLCE1Q9P212 2302 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 CACNA1GO43497 2377 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 HELTA6NFD8 242 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 OR7C2O60412 319 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 MPDU1O75352 247 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 SFTPCP11686 197 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 CHRNB4P30926 498 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 ZNF83P51522 516 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 RHOBP62745 196 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 FAM201AQ5SY85 155 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 TEPPQ6URK8 271 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 STARD4Q96DR4 205 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 LINC00479Q96M42 142 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 A0A1W2PS18 150 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 SP1P08047 785 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 TMEM249Q2WGJ8 235 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 MORN2Q502X0 79 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 SPRNQ5BIV9 151 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 S1PR3Q99500 378 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 TXN2Q99757 166 aa11.18□□□□□ -0.62
PRKN-205ENST00000366897 INTS1Q8N201 2190 aaKnown RBP11.17□□□□□ -0.62
PRKN-205ENST00000366897 NPY1RP25929 384 aa11.17□□□□□ -0.62
PRKN-205ENST00000366897 Q6ZN92 141 aa11.17□□□□□ -0.62
PRKN-205ENST00000366897 SCNM1Q9BWG6 230 aa11.17□□□□□ -0.62
PRKN-205ENST00000366897 TP73-AS1Q9UF72 201 aa11.17□□□□□ -0.62
PRKN-205ENST00000366897 ZZEF1O43149 2961 aa11.17□□□□□ -0.62
PRKN-205ENST00000366897 ESDP10768 282 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms