RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 LDLRAD2Q5SZI1 272 aa16.31■□□□□ 0.2
TRIM58-201ENST00000366481 TMEM164Q5U3C3 297 aa16.31■□□□□ 0.2
TRIM58-201ENST00000366481 LOXL4Q96JB6 756 aa16.31■□□□□ 0.2
TRIM58-201ENST00000366481 ABI3Q9P2A4 366 aa16.31■□□□□ 0.2
TRIM58-201ENST00000366481 J3QT63 122 aa16.31■□□□□ 0.2
TRIM58-201ENST00000366481 SP1P08047 785 aa16.31■□□□□ 0.2
TRIM58-201ENST00000366481 TNFSF4P23510 183 aa16.31■□□□□ 0.2
TRIM58-201ENST00000366481 GABRA2P47869 451 aa16.31■□□□□ 0.2
TRIM58-201ENST00000366481 PRAMEF5Q5TYX0 476 aa16.31■□□□□ 0.2
TRIM58-201ENST00000366481 ASPHD1Q5U4P2 390 aa16.31■□□□□ 0.2
TRIM58-201ENST00000366481 PRAMEF6Q5VXH4 476 aa16.31■□□□□ 0.2
TRIM58-201ENST00000366481 GMPPAQ96IJ6 420 aaPredicted RBP16.31■□□□□ 0.2
TRIM58-201ENST00000366481 ADGRG4Q8IZF6 3080 aa16.31■□□□□ 0.2
TRIM58-201ENST00000366481 MT-CO2P00403 227 aa16.3■□□□□ 0.2
TRIM58-201ENST00000366481 MPV17P39210 176 aa16.3■□□□□ 0.2
TRIM58-201ENST00000366481 MPC1Q9Y5U8 109 aa16.3■□□□□ 0.2
TRIM58-201ENST00000366481 PKDREJQ9NTG1 2253 aa16.3■□□□□ 0.2
TRIM58-201ENST00000366481 HELTA6NFD8 242 aa16.3■□□□□ 0.2
TRIM58-201ENST00000366481 PMS2P5A8MQ11 134 aa16.3■□□□□ 0.2
TRIM58-201ENST00000366481 FABP6P51161 128 aa16.3■□□□□ 0.2
TRIM58-201ENST00000366481 TIGITQ495A1 244 aa16.3■□□□□ 0.2
TRIM58-201ENST00000366481 SPATA31B1PQ5VZV4 182 aa16.3■□□□□ 0.2
TRIM58-201ENST00000366481 RNASEKQ6P5S7 137 aaKnown RBP16.3■□□□□ 0.2
TRIM58-201ENST00000366481 PLEKHA3Q9HB20 300 aa16.3■□□□□ 0.2
TRIM58-201ENST00000366481 ZNF331Q9NQX6 463 aaPredicted RBP16.3■□□□□ 0.2
TRIM58-201ENST00000366481 METRNQ9UJH8 293 aa16.3■□□□□ 0.2
TRIM58-201ENST00000366481 WDR83OSQ9Y284 106 aa16.3■□□□□ 0.2
TRIM58-201ENST00000366481 OR5B21A6NL26 309 aa16.3■□□□□ 0.2
TRIM58-201ENST00000366481 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.3■□□□□ 0.2
TRIM58-201ENST00000366481 CRYBB3P26998 211 aa16.3■□□□□ 0.2
TRIM58-201ENST00000366481 CDKN1BP46527 198 aa16.3■□□□□ 0.2
TRIM58-201ENST00000366481 PRRX1P54821 245 aa16.3■□□□□ 0.2
TRIM58-201ENST00000366481 CENPWQ5EE01 88 aa16.3■□□□□ 0.2
TRIM58-201ENST00000366481 WDR73Q6P4I2 378 aa16.3■□□□□ 0.2
TRIM58-201ENST00000366481 VKORC1L1Q8N0U8 176 aa16.3■□□□□ 0.2
TRIM58-201ENST00000366481 OR4A16Q8NH70 328 aa16.3■□□□□ 0.2
TRIM58-201ENST00000366481 EAF1Q96JC9 268 aaPredicted RBP16.3■□□□□ 0.2
TRIM58-201ENST00000366481 FOXH1O75593 365 aa16.29■□□□□ 0.2
TRIM58-201ENST00000366481 CA1P00915 261 aaPredicted RBP16.29■□□□□ 0.2
TRIM58-201ENST00000366481 GCHFRP30047 84 aa16.29■□□□□ 0.2
TRIM58-201ENST00000366481 SSTR5P35346 364 aa16.29■□□□□ 0.2
TRIM58-201ENST00000366481 VHLLQ6RSH7 139 aa16.29■□□□□ 0.2
TRIM58-201ENST00000366481 MOB1BQ7L9L4 216 aa16.29■□□□□ 0.2
TRIM58-201ENST00000366481 ABHD12Q8N2K0 398 aa16.29■□□□□ 0.2
TRIM58-201ENST00000366481 ZNF645Q8N7E2 425 aa16.29■□□□□ 0.2
TRIM58-201ENST00000366481 NHLRC2Q8NBF2 726 aa16.29■□□□□ 0.2
TRIM58-201ENST00000366481 BCL2L2Q92843 193 aaPredicted RBP16.29■□□□□ 0.2
TRIM58-201ENST00000366481 M0R2Z0 102 aa16.29■□□□□ 0.2
TRIM58-201ENST00000366481 SS18L1O75177 396 aaPredicted RBP16.29■□□□□ 0.2
TRIM58-201ENST00000366481 CA2P00918 260 aa16.29■□□□□ 0.2
TRIM58-201ENST00000366481 CTRLP40313 264 aa16.29■□□□□ 0.2
TRIM58-201ENST00000366481 EDDM3AQ14507 147 aa16.29■□□□□ 0.2
TRIM58-201ENST00000366481 RTL8AQ9BWD3 113 aa16.29■□□□□ 0.2
TRIM58-201ENST00000366481 MS4A5Q9H3V2 200 aa16.29■□□□□ 0.2
TRIM58-201ENST00000366481 PSG11Q9UQ72 335 aa16.29■□□□□ 0.2
TRIM58-201ENST00000366481 WASHC3Q9Y3C0 194 aa16.29■□□□□ 0.2
TRIM58-201ENST00000366481 ARL2-SNX15V9GYD0 113 aa16.29■□□□□ 0.2
TRIM58-201ENST00000366481 CGAP01215 116 aa16.28■□□□□ 0.2
TRIM58-201ENST00000366481 ESDP10768 282 aa16.28■□□□□ 0.2
TRIM58-201ENST00000366481 NRN1LQ496H8 165 aa16.28■□□□□ 0.2
TRIM58-201ENST00000366481 C5orf30Q96GV9 206 aa16.28■□□□□ 0.2
TRIM58-201ENST00000366481 CLEC7AQ9BXN2 247 aa16.28■□□□□ 0.2
TRIM58-201ENST00000366481 SEPSECSQ9HD40 501 aaKnown RBP16.28■□□□□ 0.2
TRIM58-201ENST00000366481 H0Y8G0 127 aa16.28■□□□□ 0.2
TRIM58-201ENST00000366481 APCSP02743 223 aa16.28■□□□□ 0.2
TRIM58-201ENST00000366481 SP9P0CG40 484 aa16.28■□□□□ 0.2
TRIM58-201ENST00000366481 TBC1D28Q2M2D7 210 aa16.28■□□□□ 0.2
TRIM58-201ENST00000366481 Q6ZR03 302 aa16.28■□□□□ 0.2
TRIM58-201ENST00000366481 GNB1LQ9BYB4 327 aa16.28■□□□□ 0.2
TRIM58-201ENST00000366481 C15orf62A8K5M9 175 aa16.28■□□□□ 0.2
TRIM58-201ENST00000366481 FCGR3BO75015 233 aa16.28■□□□□ 0.2
TRIM58-201ENST00000366481 USF1P22415 310 aaPredicted RBP16.28■□□□□ 0.2
TRIM58-201ENST00000366481 SMIM15Q7Z3B0 74 aa16.28■□□□□ 0.2
TRIM58-201ENST00000366481 SSBP3Q9BWW4 388 aaPredicted RBP16.28■□□□□ 0.2
TRIM58-201ENST00000366481 PSG5Q15238 335 aa16.27■□□□□ 0.2
TRIM58-201ENST00000366481 HES3Q5TGS1 186 aa16.27■□□□□ 0.2
TRIM58-201ENST00000366481 ZNF497Q6ZNH5 498 aa16.27■□□□□ 0.2
TRIM58-201ENST00000366481 LINC00596Q86U02 117 aa16.27■□□□□ 0.2
TRIM58-201ENST00000366481 Q8N976 141 aa16.27■□□□□ 0.2
TRIM58-201ENST00000366481 C12orf77C9JDV5 145 aa16.27■□□□□ 0.19
TRIM58-201ENST00000366481 OR7C2O60412 319 aa16.27■□□□□ 0.19
TRIM58-201ENST00000366481 SMPD2O60906 423 aa16.27■□□□□ 0.19
TRIM58-201ENST00000366481 STAG3L2P0CL84 134 aa16.27■□□□□ 0.19
TRIM58-201ENST00000366481 STAG3L3P0CL85 134 aa16.27■□□□□ 0.19
TRIM58-201ENST00000366481 TP73-AS1Q9UF72 201 aa16.27■□□□□ 0.19
TRIM58-201ENST00000366481 PLCE1Q9P212 2302 aa16.27■□□□□ 0.19
TRIM58-201ENST00000366481 LOC105371242A0A075B767 164 aa16.26■□□□□ 0.19
TRIM58-201ENST00000366481 TRGV5A0A0B4J1U4 118 aa16.26■□□□□ 0.19
TRIM58-201ENST00000366481 HAND1O96004 215 aa16.26■□□□□ 0.19
TRIM58-201ENST00000366481 OR4A47Q6IF82 309 aa16.26■□□□□ 0.19
TRIM58-201ENST00000366481 TREML4Q6UXN2 200 aa16.26■□□□□ 0.19
TRIM58-201ENST00000366481 SLC24A4Q8NFF2 622 aa16.26■□□□□ 0.19
TRIM58-201ENST00000366481 SELENOKQ9Y6D0 94 aa16.26■□□□□ 0.19
TRIM58-201ENST00000366481 IGHV2OR16-5A0A0B4J2B6 119 aa16.26■□□□□ 0.19
TRIM58-201ENST00000366481 MT-ND6P03923 174 aa16.26■□□□□ 0.19
TRIM58-201ENST00000366481 TSKUQ8WUA8 353 aa16.26■□□□□ 0.19
TRIM58-201ENST00000366481 SPRY4Q9C004 299 aa16.26■□□□□ 0.19
TRIM58-201ENST00000366481 INTS1Q8N201 2190 aaKnown RBP16.26■□□□□ 0.19
TRIM58-201ENST00000366481 TRBV6-6A0A0A6YYG2 114 aa16.26■□□□□ 0.19
TRIM58-201ENST00000366481 SPAARA0A1B0GVQ0 90 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms