RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 RBFOX3A6NFN3 312 aa9.47□□□□□ -0.89
HPS1-204ENST00000361490 SH2D7A6NKC9 451 aaPredicted RBP9.47□□□□□ -0.89
HPS1-204ENST00000361490 SNAPINO95295 136 aa9.47□□□□□ -0.89
HPS1-204ENST00000361490 RBP4P02753 201 aa9.47□□□□□ -0.89
HPS1-204ENST00000361490 DVL1P1P54792 670 aaPredicted RBP9.47□□□□□ -0.89
HPS1-204ENST00000361490 B2MP61769 119 aa9.47□□□□□ -0.89
HPS1-204ENST00000361490 FAM78BQ5VT40 261 aa9.47□□□□□ -0.89
HPS1-204ENST00000361490 GINS3Q9BRX5 216 aa9.47□□□□□ -0.89
HPS1-204ENST00000361490 ACTR3CQ9C0K3 210 aaPredicted RBP9.47□□□□□ -0.89
HPS1-204ENST00000361490 ANKRD17O75179 2603 aaKnown RBP9.47□□□□□ -0.89
HPS1-204ENST00000361490 WNK1Q9H4A3 2382 aa9.47□□□□□ -0.89
HPS1-204ENST00000361490 A6NNC1 897 aa9.47□□□□□ -0.89
HPS1-204ENST00000361490 LYL1P12980 280 aa9.47□□□□□ -0.89
HPS1-204ENST00000361490 RELBQ01201 579 aa9.47□□□□□ -0.89
HPS1-204ENST00000361490 TMEM155Q4W5P6 130 aa9.47□□□□□ -0.89
HPS1-204ENST00000361490 IL34Q6ZMJ4 242 aa9.47□□□□□ -0.89
HPS1-204ENST00000361490 TCTEX1D1Q8N7M0 179 aa9.47□□□□□ -0.89
HPS1-204ENST00000361490 VSTM2AQ8TAG5 236 aa9.47□□□□□ -0.89
HPS1-204ENST00000361490 PLA2G2EQ9NZK7 142 aa9.47□□□□□ -0.89
HPS1-204ENST00000361490 ADIRFQ15847 76 aa9.46□□□□□ -0.89
HPS1-204ENST00000361490 ACOT6Q3I5F7 207 aaPredicted RBP9.46□□□□□ -0.89
HPS1-204ENST00000361490 BRD3OSQ6XYD6 125 aa9.46□□□□□ -0.89
HPS1-204ENST00000361490 PUSL1Q8N0Z8 303 aaKnown RBP9.46□□□□□ -0.89
HPS1-204ENST00000361490 FAM168AQ92567 244 aa9.46□□□□□ -0.89
HPS1-204ENST00000361490 RITA1Q96K30 269 aa9.46□□□□□ -0.89
HPS1-204ENST00000361490 MED9Q9NWA0 146 aa9.46□□□□□ -0.89
HPS1-204ENST00000361490 DCHS2Q6V1P9 2916 aa9.46□□□□□ -0.89
HPS1-204ENST00000361490 FAM90A26D6RGX4 464 aa9.46□□□□□ -0.89
HPS1-204ENST00000361490 MMP9P14780 707 aa9.46□□□□□ -0.89
HPS1-204ENST00000361490 OR10J1P30954 320 aa9.46□□□□□ -0.89
HPS1-204ENST00000361490 CEACAM3P40198 252 aa9.46□□□□□ -0.89
HPS1-204ENST00000361490 CDC34P49427 236 aaPredicted RBP9.46□□□□□ -0.89
HPS1-204ENST00000361490 SUB1P53999 127 aaKnown RBP eCLIP9.46□□□□□ -0.893e-6■■■□□ 16.6
HPS1-204ENST00000361490 LY6EQ16553 131 aa9.46□□□□□ -0.89
HPS1-204ENST00000361490 HAPLN4Q86UW8 402 aa9.46□□□□□ -0.89
HPS1-204ENST00000361490 OR2T6Q8NHC8 308 aa9.46□□□□□ -0.89
HPS1-204ENST00000361490 TMUB1Q9BVT8 246 aa9.46□□□□□ -0.89
HPS1-204ENST00000361490 ZNF430Q9H8G1 570 aaPredicted RBP9.46□□□□□ -0.89
HPS1-204ENST00000361490 IGHV3OR16-8A0A075B7F1 116 aa9.46□□□□□ -0.9
HPS1-204ENST00000361490 TRBV23-1A0A0A0MS06 115 aa9.46□□□□□ -0.9
HPS1-204ENST00000361490 OR10J4P0C629 311 aa9.46□□□□□ -0.9
HPS1-204ENST00000361490 RPL27AP46776 148 aaKnown RBP9.46□□□□□ -0.9
HPS1-204ENST00000361490 PSMB3P49720 205 aa9.46□□□□□ -0.9
HPS1-204ENST00000361490 ZFP82Q8N141 532 aa9.46□□□□□ -0.9
HPS1-204ENST00000361490 KIR3DL3Q8N743 410 aa9.46□□□□□ -0.9
HPS1-204ENST00000361490 NECAP1Q8NC96 275 aa9.46□□□□□ -0.9
HPS1-204ENST00000361490 REG4Q9BYZ8 158 aa9.46□□□□□ -0.9
HPS1-204ENST00000361490 DPM3Q9P2X0 92 aa9.46□□□□□ -0.9
HPS1-204ENST00000361490 RAB19A4D1S5 217 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 FAM74A7A6NL05 159 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 C15orf61A6NNL5 157 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 H0YJW9 148 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 TAGLN2P37802 199 aaKnown RBP9.45□□□□□ -0.9
HPS1-204ENST00000361490 NPBWR1P48145 328 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 EFNA4P52798 201 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 FAM74A3Q4VXF1 159 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 CYB561D1Q8N8Q1 229 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 OR4P4Q8NGL7 312 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 RAB24Q969Q5 203 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 RCC1LQ96I51 464 aaKnown RBP9.45□□□□□ -0.9
HPS1-204ENST00000361490 NABP2Q9BQ15 211 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 FKBP11Q9NYL4 201 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 AMMECR1Q9Y4X0 333 aaPredicted RBP9.45□□□□□ -0.9
HPS1-204ENST00000361490 PXMP4Q9Y6I8 212 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 ZNF727A8MUV8 499 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 PAGE4O60829 102 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 IGFBP2P18065 325 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 MC5RP33032 325 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 ECSCRQ19T08 205 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 FBXL19-AS1Q494R0 122 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 KLF17Q5JT82 389 aaPredicted RBP9.45□□□□□ -0.9
HPS1-204ENST00000361490 ACSM6Q6P461 480 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 NPIPB3Q92617 1050 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 NIPSNAP3BQ9BS92 247 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 TEX50A0A1B0GTY4 177 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 C9JQL5 133 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 H3BTX0 84 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 TRIM77I1YAP6 450 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 UPK2O00526 184 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 IGHV3-23P01764 117 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 TEPPQ6URK8 271 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 NPCDR1Q9BY65 106 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 NPVFQ9HCQ7 196 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 LINC00527Q9UJ94 153 aa9.45□□□□□ -0.9
HPS1-204ENST00000361490 MOSP00540 346 aa9.44□□□□□ -0.9
HPS1-204ENST00000361490 RND2P52198 227 aa9.44□□□□□ -0.9
HPS1-204ENST00000361490 LRRC75BQ2VPJ9 315 aa9.44□□□□□ -0.9
HPS1-204ENST00000361490 HLA-DRB5Q30154 266 aa9.44□□□□□ -0.9
HPS1-204ENST00000361490 RBMS3Q6XE24 437 aaKnown RBP9.44□□□□□ -0.9
HPS1-204ENST00000361490 OSR1Q8TAX0 266 aaPredicted RBP9.44□□□□□ -0.9
HPS1-204ENST00000361490 BBC3Q96PG8 261 aaPredicted RBP9.44□□□□□ -0.9
HPS1-204ENST00000361490 C15orf62A8K5M9 175 aa9.44□□□□□ -0.9
HPS1-204ENST00000361490 VMO1Q7Z5L0 202 aa9.44□□□□□ -0.9
HPS1-204ENST00000361490 LFNGQ8NES3 379 aa9.44□□□□□ -0.9
HPS1-204ENST00000361490 GATAD1Q8WUU5 269 aa9.44□□□□□ -0.9
HPS1-204ENST00000361490 SLC35B3Q9H1N7 401 aa9.44□□□□□ -0.9
HPS1-204ENST00000361490 JMJD1CQ15652 2540 aa9.44□□□□□ -0.9
HPS1-204ENST00000361490 IGHV1-3A0A0C4DH29 117 aa9.44□□□□□ -0.9
HPS1-204ENST00000361490 A8MXK9 166 aa9.44□□□□□ -0.9
HPS1-204ENST00000361490 FGF16O43320 207 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms