RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 FAM74A4Q5TZK3 123 aa17.69■□□□□ 0.42
SMURF1-201ENST00000361125 PAQR4Q8N4S7 273 aaPredicted RBP17.69■□□□□ 0.42
SMURF1-201ENST00000361125 LYNX1G3V0Z9 82 aa17.69■□□□□ 0.42
SMURF1-201ENST00000361125 H0YIZ8 118 aa17.69■□□□□ 0.42
SMURF1-201ENST00000361125 HLA-DQA1P01909 254 aa17.69■□□□□ 0.42
SMURF1-201ENST00000361125 LYNX1P0DP58 116 aa17.69■□□□□ 0.42
SMURF1-201ENST00000361125 SPACA3Q8IXA5 215 aa17.69■□□□□ 0.42
SMURF1-201ENST00000361125 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.69■□□□□ 0.42
SMURF1-201ENST00000361125 CDC42EP3Q9UKI2 254 aa17.69■□□□□ 0.42
SMURF1-201ENST00000361125 CSRP1P21291 193 aaKnown RBP17.69■□□□□ 0.42
SMURF1-201ENST00000361125 PLSCR2Q9NRY7 297 aa17.69■□□□□ 0.42
SMURF1-201ENST00000361125 ABCA7Q8IZY2 2146 aa17.69■□□□□ 0.42
SMURF1-201ENST00000361125 RLFQ13129 1914 aa17.69■□□□□ 0.42
SMURF1-201ENST00000361125 ICAM4Q14773 271 aa17.69■□□□□ 0.42
SMURF1-201ENST00000361125 ARTNQ5T4W7 220 aa17.69■□□□□ 0.42
SMURF1-201ENST00000361125 A6NDN8 102 aa17.69■□□□□ 0.42
SMURF1-201ENST00000361125 EFNA2O43921 213 aa17.69■□□□□ 0.42
SMURF1-201ENST00000361125 CGAP01215 116 aa17.69■□□□□ 0.42
SMURF1-201ENST00000361125 OTX1P32242 354 aaPredicted RBP17.69■□□□□ 0.42
SMURF1-201ENST00000361125 SEMA5BQ9P283 1151 aa17.69■□□□□ 0.42
SMURF1-201ENST00000361125 SIAH2O43255 324 aa17.68■□□□□ 0.42
SMURF1-201ENST00000361125 SRIP30626 198 aa17.68■□□□□ 0.42
SMURF1-201ENST00000361125 RPL24P83731 157 aaKnown RBP17.68■□□□□ 0.42
SMURF1-201ENST00000361125 FOXF2Q12947 444 aa17.68■□□□□ 0.42
SMURF1-201ENST00000361125 UCP1P25874 307 aa17.68■□□□□ 0.42
SMURF1-201ENST00000361125 HERPUD1Q15011 391 aa17.68■□□□□ 0.42
SMURF1-201ENST00000361125 PPP1R27Q86WC6 154 aa17.68■□□□□ 0.42
SMURF1-201ENST00000361125 GSN-AS1Q9NRJ2 163 aa17.68■□□□□ 0.42
SMURF1-201ENST00000361125 FBLN5Q9UBX5 448 aa17.68■□□□□ 0.42
SMURF1-201ENST00000361125 LINC00312Q9Y6C7 94 aa17.68■□□□□ 0.42
SMURF1-201ENST00000361125 SAA2-SAA4A0A096LPE2 208 aa17.68■□□□□ 0.42
SMURF1-201ENST00000361125 TCF21O43680 179 aa17.68■□□□□ 0.42
SMURF1-201ENST00000361125 SAA2P0DJI9 122 aaPredicted RBP17.68■□□□□ 0.42
SMURF1-201ENST00000361125 RPS20P60866 119 aaKnown RBP17.68■□□□□ 0.42
SMURF1-201ENST00000361125 WDR82Q6UXN9 313 aa17.68■□□□□ 0.42
SMURF1-201ENST00000361125 RNASE6Q93091 150 aaKnown RBP17.68■□□□□ 0.42
SMURF1-201ENST00000361125 MAP1LC3AQ9H492 121 aa17.68■□□□□ 0.42
SMURF1-201ENST00000361125 MPZP25189 248 aa17.68■□□□□ 0.42
SMURF1-201ENST00000361125 RTN4RL2Q86UN3 420 aa17.68■□□□□ 0.42
SMURF1-201ENST00000361125 C18orf12Q96KH6 178 aa17.68■□□□□ 0.42
SMURF1-201ENST00000361125 FGF16O43320 207 aa17.67■□□□□ 0.42
SMURF1-201ENST00000361125 MBNL2Q5VZF2 373 aaKnown RBP17.67■□□□□ 0.42
SMURF1-201ENST00000361125 TMEM183AQ8IXX5 376 aa17.67■□□□□ 0.42
SMURF1-201ENST00000361125 A0A0A6YYD4 124 aa17.67■□□□□ 0.42
SMURF1-201ENST00000361125 PF4P02776 101 aa17.67■□□□□ 0.42
SMURF1-201ENST00000361125 GCSHP23434 173 aa17.67■□□□□ 0.42
SMURF1-201ENST00000361125 MST1P26927 711 aa17.67■□□□□ 0.42
SMURF1-201ENST00000361125 IGKV1D-13A0A0B4J2D9 117 aa17.67■□□□□ 0.42
SMURF1-201ENST00000361125 IGKV1-13P0DP09 117 aa17.67■□□□□ 0.42
SMURF1-201ENST00000361125 C19orf54Q5BKX5 351 aa17.67■□□□□ 0.42
SMURF1-201ENST00000361125 ARPC1AQ92747 370 aa17.67■□□□□ 0.42
SMURF1-201ENST00000361125 GPR82Q96P67 336 aa17.67■□□□□ 0.42
SMURF1-201ENST00000361125 KLK15Q9H2R5 256 aa17.67■□□□□ 0.42
SMURF1-201ENST00000361125 C7orf69Q9H7B7 122 aa17.67■□□□□ 0.42
SMURF1-201ENST00000361125 MEF2CQ06413 473 aaPredicted RBP17.67■□□□□ 0.42
SMURF1-201ENST00000361125 NPIPB7O75200 414 aa17.67■□□□□ 0.42
SMURF1-201ENST00000361125 SNRPD3P62318 126 aaKnown RBP17.67■□□□□ 0.42
SMURF1-201ENST00000361125 FAM181BA6NEQ2 426 aa17.66■□□□□ 0.42
SMURF1-201ENST00000361125 FAM90A1Q86YD7 464 aa17.66■□□□□ 0.42
SMURF1-201ENST00000361125 GRIFINA4D1Z8 144 aa17.66■□□□□ 0.42
SMURF1-201ENST00000361125 GATA2P23769 480 aaPredicted RBP17.66■□□□□ 0.42
SMURF1-201ENST00000361125 FOXG1P55316 489 aaPredicted RBP17.66■□□□□ 0.42
SMURF1-201ENST00000361125 DLX6P56179 175 aa17.66■□□□□ 0.42
SMURF1-201ENST00000361125 GATAD1Q8WUU5 269 aa17.66■□□□□ 0.42
SMURF1-201ENST00000361125 GPR183P32249 361 aa17.66■□□□□ 0.42
SMURF1-201ENST00000361125 CLDND2Q8NHS1 167 aa17.66■□□□□ 0.42
SMURF1-201ENST00000361125 CIDEAO60543 219 aa17.66■□□□□ 0.42
SMURF1-201ENST00000361125 UQCRFS1P47985 274 aa17.66■□□□□ 0.42
SMURF1-201ENST00000361125 OR10S1Q8NGN2 331 aa17.66■□□□□ 0.42
SMURF1-201ENST00000361125 CLEC19AQ6UXS0 136 aa17.65■□□□□ 0.42
SMURF1-201ENST00000361125 GLRX5Q86SX6 157 aa17.65■□□□□ 0.42
SMURF1-201ENST00000361125 GBF1Q92538 1859 aa17.65■□□□□ 0.42
SMURF1-201ENST00000361125 NPIPB6E9PJ23 425 aa17.65■□□□□ 0.42
SMURF1-201ENST00000361125 TMEM250H0YL14 139 aa17.65■□□□□ 0.42
SMURF1-201ENST00000361125 ZNF56Q15929 161 aa17.65■□□□□ 0.42
SMURF1-201ENST00000361125 ZIC4Q8N9L1 334 aa17.65■□□□□ 0.42
SMURF1-201ENST00000361125 CD24P25063 80 aa17.65■□□□□ 0.42
SMURF1-201ENST00000361125 Q0VFX4 171 aa17.65■□□□□ 0.42
SMURF1-201ENST00000361125 TRBV6-7A0A0A0MS04 114 aa17.64■□□□□ 0.41
SMURF1-201ENST00000361125 LEPROTL1O95214 131 aa17.64■□□□□ 0.41
SMURF1-201ENST00000361125 CLPSP04118 112 aa17.64■□□□□ 0.41
SMURF1-201ENST00000361125 SAA1P0DJI8 122 aaPredicted RBP17.64■□□□□ 0.41
SMURF1-201ENST00000361125 CCL1P22362 96 aa17.64■□□□□ 0.41
SMURF1-201ENST00000361125 RAB9AP51151 201 aa17.64■□□□□ 0.41
SMURF1-201ENST00000361125 ZNF497Q6ZNH5 498 aa17.64■□□□□ 0.41
SMURF1-201ENST00000361125 GGNQ86UU5 652 aa17.64■□□□□ 0.41
SMURF1-201ENST00000361125 TEX45Q8NA69 505 aa17.64■□□□□ 0.41
SMURF1-201ENST00000361125 CBLN4Q9NTU7 201 aa17.64■□□□□ 0.41
SMURF1-201ENST00000361125 COL4A6Q14031 1691 aa17.64■□□□□ 0.41
SMURF1-201ENST00000361125 TRAV24A0A0B4J272 114 aa17.64■□□□□ 0.41
SMURF1-201ENST00000361125 A0A1B0GV90 55 aa17.64■□□□□ 0.41
SMURF1-201ENST00000361125 RBFOX2O43251 390 aaKnown RBP eCLIP17.64■□□□□ 0.41
SMURF1-201ENST00000361125 ATG101Q9BSB4 218 aa17.64■□□□□ 0.41
SMURF1-201ENST00000361125 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.64■□□□□ 0.41
SMURF1-201ENST00000361125 H7C2G1 150 aa17.64■□□□□ 0.41
SMURF1-201ENST00000361125 SMAGPQ0VAQ4 97 aa17.64■□□□□ 0.41
SMURF1-201ENST00000361125 RAMP3O60896 148 aa17.63■□□□□ 0.41
SMURF1-201ENST00000361125 TGFAP01135 160 aa17.63■□□□□ 0.41
SMURF1-201ENST00000361125 A0A087WWC5 75 aa17.63■□□□□ 0.41
SMURF1-201ENST00000361125 COTL1Q14019 142 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms