RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 SRSF7Q16629 238 aaKnown RBP eCLIP13.66□□□□□ -0.22
SCAF1-201ENST00000360565 TMEM30BQ3MIR4 351 aa13.66□□□□□ -0.22
SCAF1-201ENST00000360565 GSN-AS1Q9NRJ2 163 aa13.66□□□□□ -0.22
SCAF1-201ENST00000360565 BET1LQ9NYM9 111 aa13.66□□□□□ -0.22
SCAF1-201ENST00000360565 U3KQA8 63 aa13.66□□□□□ -0.22
SCAF1-201ENST00000360565 PPIAL4CA0A0B4J2A2 164 aa13.66□□□□□ -0.22
SCAF1-201ENST00000360565 C1QTNF9BB2RNN3 333 aa13.66□□□□□ -0.22
SCAF1-201ENST00000360565 PPIAL4GP0DN37 164 aa13.66□□□□□ -0.22
SCAF1-201ENST00000360565 PTTG1IPP53801 180 aa13.66□□□□□ -0.22
SCAF1-201ENST00000360565 CCDC144NLQ6NUI1 221 aa13.66□□□□□ -0.22
SCAF1-201ENST00000360565 TMEM183AQ8IXX5 376 aa13.66□□□□□ -0.22
SCAF1-201ENST00000360565 WDR31Q8NA23 367 aa13.66□□□□□ -0.22
SCAF1-201ENST00000360565 PROK2Q9HC23 129 aa13.66□□□□□ -0.22
SCAF1-201ENST00000360565 MOSP00540 346 aa13.66□□□□□ -0.22
SCAF1-201ENST00000360565 GBGT1Q8N5D6 347 aa13.66□□□□□ -0.22
SCAF1-201ENST00000360565 IGHV1-69-2A0A0G2JMI3 117 aa13.66□□□□□ -0.22
SCAF1-201ENST00000360565 SRIP30626 198 aa13.66□□□□□ -0.22
SCAF1-201ENST00000360565 RSPO1Q2MKA7 263 aaPredicted RBP13.66□□□□□ -0.22
SCAF1-201ENST00000360565 OSR1Q8TAX0 266 aaPredicted RBP13.66□□□□□ -0.22
SCAF1-201ENST00000360565 C19orf24Q9BVV8 132 aa13.66□□□□□ -0.22
SCAF1-201ENST00000360565 HSPB7Q9UBY9 170 aa13.66□□□□□ -0.22
SCAF1-201ENST00000360565 PLCE1Q9P212 2302 aa13.65□□□□□ -0.22
SCAF1-201ENST00000360565 IGKV3-7A0A075B6H7 116 aa13.65□□□□□ -0.22
SCAF1-201ENST00000360565 WIPF3A6NGB9 483 aa13.65□□□□□ -0.22
SCAF1-201ENST00000360565 YPEL1O60688 119 aa13.65□□□□□ -0.22
SCAF1-201ENST00000360565 LYL1P12980 280 aa13.65□□□□□ -0.22
SCAF1-201ENST00000360565 CCL3L1P16619 93 aa13.65□□□□□ -0.22
SCAF1-201ENST00000360565 GCSAMLQ5JQS6 135 aa13.65□□□□□ -0.22
SCAF1-201ENST00000360565 ASCL4Q6XD76 172 aa13.65□□□□□ -0.22
SCAF1-201ENST00000360565 RNF166Q96A37 237 aaPredicted RBP13.65□□□□□ -0.22
SCAF1-201ENST00000360565 YPEL2Q96QA6 119 aa13.65□□□□□ -0.22
SCAF1-201ENST00000360565 TMEM106BQ9NUM4 274 aa13.65□□□□□ -0.22
SCAF1-201ENST00000360565 DUTP33316 252 aaKnown RBP13.65□□□□□ -0.22
SCAF1-201ENST00000360565 RPL30P62888 115 aaKnown RBP13.65□□□□□ -0.22
SCAF1-201ENST00000360565 IFI27L2Q9H2X8 130 aa13.65□□□□□ -0.22
SCAF1-201ENST00000360565 RNF115Q9Y4L5 304 aa13.65□□□□□ -0.22
SCAF1-201ENST00000360565 IGHV1-18A0A0C4DH31 117 aa13.65□□□□□ -0.22
SCAF1-201ENST00000360565 BMPR1BO00238 502 aa13.65□□□□□ -0.22
SCAF1-201ENST00000360565 SELLP14151 372 aa13.65□□□□□ -0.22
SCAF1-201ENST00000360565 C20orf204Q6ZNR8 217 aa13.65□□□□□ -0.22
SCAF1-201ENST00000360565 SAA2-SAA4A0A096LPE2 208 aa13.64□□□□□ -0.23
SCAF1-201ENST00000360565 SAA2P0DJI9 122 aaPredicted RBP13.64□□□□□ -0.23
SCAF1-201ENST00000360565 HERPUD1Q15011 391 aa13.64□□□□□ -0.23
SCAF1-201ENST00000360565 BPIFA4PQ86YQ2 179 aa13.64□□□□□ -0.23
SCAF1-201ENST00000360565 A0A0G2JRQ6 117 aa13.64□□□□□ -0.23
SCAF1-201ENST00000360565 TEX50A0A1B0GTY4 177 aa13.64□□□□□ -0.23
SCAF1-201ENST00000360565 ZNF25P17030 456 aaPredicted RBP13.64□□□□□ -0.23
SCAF1-201ENST00000360565 ATP5IP56385 69 aaPredicted RBP13.64□□□□□ -0.23
SCAF1-201ENST00000360565 LCN2P80188 198 aa13.64□□□□□ -0.23
SCAF1-201ENST00000360565 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.64□□□□□ -0.23
SCAF1-201ENST00000360565 MBD3L1Q8WWY6 194 aa13.64□□□□□ -0.23
SCAF1-201ENST00000360565 SNRNP40Q96DI7 357 aaKnown RBP13.64□□□□□ -0.23
SCAF1-201ENST00000360565 GSX1Q9H4S2 264 aaPredicted RBP13.64□□□□□ -0.23
SCAF1-201ENST00000360565 UFC1Q9Y3C8 167 aa13.64□□□□□ -0.23
SCAF1-201ENST00000360565 OR9G9P0C7N8 305 aa13.64□□□□□ -0.23
SCAF1-201ENST00000360565 KIR2DL2P43627 348 aaPredicted RBP13.64□□□□□ -0.23
SCAF1-201ENST00000360565 FAM90A1Q86YD7 464 aa13.64□□□□□ -0.23
SCAF1-201ENST00000360565 DMRTA2Q96SC8 542 aa13.64□□□□□ -0.23
SCAF1-201ENST00000360565 MRPL37Q9BZE1 423 aaKnown RBP13.64□□□□□ -0.23
SCAF1-201ENST00000360565 BSPH1Q075Z2 132 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 RPP25LQ8N5L8 163 aaKnown RBP13.63□□□□□ -0.23
SCAF1-201ENST00000360565 ABHD17AQ96GS6 310 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 MRPL20Q9BYC9 149 aaKnown RBP13.63□□□□□ -0.23
SCAF1-201ENST00000360565 C9JQL5 133 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 SMIM17P0DL12 118 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 MST1LQ2TV78 715 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 HEPN1Q6WQI6 88 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 MIR17HGQ75NE6 70 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 OR4C5Q8NGB2 326 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 LINC01560Q8TB33 94 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 IMMP2LQ96T52 175 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 LIME1Q9H400 295 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 NCOA6Q14686 2063 aaPredicted RBP13.63□□□□□ -0.23
SCAF1-201ENST00000360565 LINC00587B1AMM8 73 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 J3KRW8 73 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 HIST1H2BKO60814 126 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 HIST1H2BJP06899 126 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 HIST1H2BOP23527 126 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 HIST1H2BBP33778 126 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 HIST1H2BDP58876 126 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 HIST1H2BCP62807 126 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 HIST2H2BEQ16778 126 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 TMEM177Q53S58 311 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.63□□□□□ -0.23
SCAF1-201ENST00000360565 Q6ZRM9 215 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 MUC15Q8N387 334 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 HIST1H2BHQ93079 126 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 HIST1H2BNQ99877 126 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 HIST1H2BMQ99879 126 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 VPS25Q9BRG1 176 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 MAP1LC3CQ9BXW4 147 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 RALYQ9UKM9 306 aaKnown RBP13.63□□□□□ -0.23
SCAF1-201ENST00000360565 PGPEP1LA6NFU8 196 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 TM4SF5O14894 197 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 GOSR1O95249 250 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 PRSS1P07477 247 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 GUCD1Q96NT3 240 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 CLEC7AQ9BXN2 247 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 WDR83OSQ9Y284 106 aa13.63□□□□□ -0.23
SCAF1-201ENST00000360565 FREM1Q5H8C1 2179 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms