RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 HIST1H2BNQ99877 126 aa10.32□□□□□ -0.76
DNMT1-202ENST00000359526 HIST1H2BMQ99879 126 aa10.32□□□□□ -0.76
DNMT1-202ENST00000359526 RNF126Q9BV68 326 aa10.32□□□□□ -0.76
DNMT1-202ENST00000359526 IGKV1D-43A0A0B4J1Z2 117 aa10.32□□□□□ -0.76
DNMT1-202ENST00000359526 NUDT3O95989 172 aa10.32□□□□□ -0.76
DNMT1-202ENST00000359526 REPIN1Q9BWE0 567 aaKnown RBP10.32□□□□□ -0.76
DNMT1-202ENST00000359526 CACNA1IQ9P0X4 2223 aa10.32□□□□□ -0.76
DNMT1-202ENST00000359526 COLCA2A8K830 154 aa10.32□□□□□ -0.76
DNMT1-202ENST00000359526 H7C2G1 150 aa10.32□□□□□ -0.76
DNMT1-202ENST00000359526 FBLN7Q53RD9 439 aa10.32□□□□□ -0.76
DNMT1-202ENST00000359526 CDCP2Q5VXM1 449 aa10.32□□□□□ -0.76
DNMT1-202ENST00000359526 CLEC7AQ9BXN2 247 aa10.32□□□□□ -0.76
DNMT1-202ENST00000359526 IFI27L2Q9H2X8 130 aa10.32□□□□□ -0.76
DNMT1-202ENST00000359526 TBL2Q9Y4P3 447 aaKnown RBP10.32□□□□□ -0.76
DNMT1-202ENST00000359526 HILPDAQ9Y5L2 63 aa10.32□□□□□ -0.76
DNMT1-202ENST00000359526 PTPRZ1P23471 2315 aaPredicted RBP10.32□□□□□ -0.76
DNMT1-202ENST00000359526 IGHV3-72A0A0B4J1Y9 119 aa10.32□□□□□ -0.76
DNMT1-202ENST00000359526 TGFBR3LH3BV60 316 aa10.32□□□□□ -0.76
DNMT1-202ENST00000359526 C12orf77C9JDV5 145 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 ACSF3Q4G176 576 aaPredicted RBP10.31□□□□□ -0.76
DNMT1-202ENST00000359526 NPIPB3Q92617 1050 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 DERL1Q9BUN8 251 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 PPIAL4CA0A0B4J2A2 164 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 LINC00614P0C842 121 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 PPIAL4GP0DN37 164 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 CX3CL1P78423 397 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 MEF2CQ06413 473 aaPredicted RBP10.31□□□□□ -0.76
DNMT1-202ENST00000359526 LY6G6FQ5SQ64 297 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 FAM53AQ6NSI3 398 aaPredicted RBP10.31□□□□□ -0.76
DNMT1-202ENST00000359526 UNQ5815/PRO19632Q6UWF5 114 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 FAM89BQ8N5H3 189 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 ZNF525Q8N782 197 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 FLVCR1-AS1Q8TAF5 88 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 A6NNC1 897 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 NBL1P41271 181 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 TM4SF20Q53R12 229 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 CACNG8Q8WXS5 425 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 SLX1AQ9BQ83 275 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 MRPL13Q9BYD1 178 aaKnown RBP10.31□□□□□ -0.76
DNMT1-202ENST00000359526 A1L4Q6 167 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 NPIPB11E5RHQ5 1161 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 LDLRAD2Q5SZI1 272 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 AMMECR1LQ6DCA0 310 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 C20orf204Q6ZNR8 217 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 REG4Q9BYZ8 158 aa10.31□□□□□ -0.76
DNMT1-202ENST00000359526 C9orf172C9J069 976 aa10.3□□□□□ -0.76
DNMT1-202ENST00000359526 GDF9O60383 454 aa10.3□□□□□ -0.76
DNMT1-202ENST00000359526 SMIM13P0DJ93 91 aa10.3□□□□□ -0.76
DNMT1-202ENST00000359526 C2orf83Q53S99 150 aa10.3□□□□□ -0.76
DNMT1-202ENST00000359526 NUDT11Q96G61 164 aa10.3□□□□□ -0.76
DNMT1-202ENST00000359526 C2orf88Q9BSF0 95 aa10.3□□□□□ -0.76
DNMT1-202ENST00000359526 SPACA3Q8IXA5 215 aa10.3□□□□□ -0.76
DNMT1-202ENST00000359526 IGKV3-7A0A075B6H7 116 aa10.3□□□□□ -0.76
DNMT1-202ENST00000359526 CRXO43186 299 aaPredicted RBP10.3□□□□□ -0.76
DNMT1-202ENST00000359526 RELQ04864 619 aaPredicted RBP10.3□□□□□ -0.76
DNMT1-202ENST00000359526 TRBV6-7A0A0A0MS04 114 aa10.3□□□□□ -0.76
DNMT1-202ENST00000359526 ZIC3O60481 467 aa10.3□□□□□ -0.76
DNMT1-202ENST00000359526 UMODP07911 640 aa10.3□□□□□ -0.76
DNMT1-202ENST00000359526 ARF6P62330 175 aa10.3□□□□□ -0.76
DNMT1-202ENST00000359526 LINC00305Q7Z4B0 112 aa10.3□□□□□ -0.76
DNMT1-202ENST00000359526 HIST1H2BLQ99880 126 aa10.3□□□□□ -0.76
DNMT1-202ENST00000359526 PHLDA3Q9Y5J5 127 aa10.3□□□□□ -0.76
DNMT1-202ENST00000359526 DOCK3Q8IZD9 2030 aa10.3□□□□□ -0.76
DNMT1-202ENST00000359526 GAS1P54826 345 aa10.3□□□□□ -0.76
DNMT1-202ENST00000359526 Q6AWC8 147 aa10.3□□□□□ -0.76
DNMT1-202ENST00000359526 WFDC3Q8IUB2 231 aa10.3□□□□□ -0.76
DNMT1-202ENST00000359526 CHODLQ9H9P2 273 aa10.3□□□□□ -0.76
DNMT1-202ENST00000359526 TBR1Q16650 682 aa10.29□□□□□ -0.76
DNMT1-202ENST00000359526 HIST3H2BBQ8N257 126 aa10.29□□□□□ -0.76
DNMT1-202ENST00000359526 KCNS1Q96KK3 526 aa10.29□□□□□ -0.76
DNMT1-202ENST00000359526 IMMP2LQ96T52 175 aa10.29□□□□□ -0.76
DNMT1-202ENST00000359526 NEU1Q99519 415 aa10.29□□□□□ -0.76
DNMT1-202ENST00000359526 IGHV1-69-2A0A0G2JMI3 117 aa10.29□□□□□ -0.76
DNMT1-202ENST00000359526 RRHO14718 337 aa10.29□□□□□ -0.76
DNMT1-202ENST00000359526 ZNF324O75467 553 aaPredicted RBP10.29□□□□□ -0.76
DNMT1-202ENST00000359526 EMP1P54849 157 aa10.29□□□□□ -0.76
DNMT1-202ENST00000359526 PAPPA-AS1Q5QFB9 102 aa10.29□□□□□ -0.76
DNMT1-202ENST00000359526 HEPN1Q6WQI6 88 aa10.29□□□□□ -0.76
DNMT1-202ENST00000359526 LRTM2Q8N967 370 aa10.29□□□□□ -0.76
DNMT1-202ENST00000359526 RNASEH2CQ8TDP1 164 aaKnown RBP10.29□□□□□ -0.76
DNMT1-202ENST00000359526 FMC1Q96HJ9 113 aa10.29□□□□□ -0.76
DNMT1-202ENST00000359526 FNDC1Q4ZHG4 1894 aaPredicted RBP10.29□□□□□ -0.76
DNMT1-202ENST00000359526 RBFOX2O43251 390 aaKnown RBP eCLIP10.29□□□□□ -0.765e-9■■■□□ 15.5
DNMT1-202ENST00000359526 TIAF1O95411 115 aa10.29□□□□□ -0.76
DNMT1-202ENST00000359526 SCGB1A1P11684 91 aa10.29□□□□□ -0.76
DNMT1-202ENST00000359526 RIPPLY3P57055 190 aa10.29□□□□□ -0.76
DNMT1-202ENST00000359526 VKORC1L1Q8N0U8 176 aa10.29□□□□□ -0.76
DNMT1-202ENST00000359526 ABHD17AQ96GS6 310 aa10.29□□□□□ -0.76
DNMT1-202ENST00000359526 SSBP3Q9BWW4 388 aaPredicted RBP10.29□□□□□ -0.76
DNMT1-202ENST00000359526 FRMPD3Q5JV73 1810 aa10.29□□□□□ -0.76
DNMT1-202ENST00000359526 SRSF7Q16629 238 aaKnown RBP eCLIP10.29□□□□□ -0.76
DNMT1-202ENST00000359526 GOLT1AQ6ZVE7 132 aa10.29□□□□□ -0.76
DNMT1-202ENST00000359526 SVILO95425 2214 aa10.28□□□□□ -0.76
DNMT1-202ENST00000359526 LDLRAD4O15165 306 aa10.28□□□□□ -0.76
DNMT1-202ENST00000359526 FAM169BQ8N8A8 192 aa10.28□□□□□ -0.76
DNMT1-202ENST00000359526 TMEM170AQ8WVE7 144 aa10.28□□□□□ -0.76
DNMT1-202ENST00000359526 PRDM13Q9H4Q3 707 aa10.28□□□□□ -0.76
DNMT1-202ENST00000359526 SPCS1Q9Y6A9 102 aa10.28□□□□□ -0.76
DNMT1-202ENST00000359526 HTN1P15515 57 aa10.28□□□□□ -0.76
DNMT1-202ENST00000359526 LGALS3P17931 250 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms