RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 C7orf66A4D0T2 115 aa6.15□□□□□ -1.43
VPS13A-202ENST00000357409 TMEM8BA6NDV4 472 aa6.15□□□□□ -1.43
VPS13A-202ENST00000357409 RAMP3O60896 148 aa6.15□□□□□ -1.43
VPS13A-202ENST00000357409 NUTF2P61970 127 aaKnown RBP6.15□□□□□ -1.43
VPS13A-202ENST00000357409 RNASE6Q93091 150 aaKnown RBP6.15□□□□□ -1.43
VPS13A-202ENST00000357409 SMIM10L1P0DMW3 83 aa6.15□□□□□ -1.43
VPS13A-202ENST00000357409 TMEM54Q969K7 222 aa6.15□□□□□ -1.43
VPS13A-202ENST00000357409 SMIM10Q96HG1 83 aa6.15□□□□□ -1.43
VPS13A-202ENST00000357409 IGHV3-38A0A0C4DH36 116 aa6.15□□□□□ -1.43
VPS13A-202ENST00000357409 J3QR89 54 aa6.15□□□□□ -1.43
VPS13A-202ENST00000357409 THBDP07204 575 aa6.15□□□□□ -1.43
VPS13A-202ENST00000357409 C2orf68Q2NKX9 166 aa6.15□□□□□ -1.43
VPS13A-202ENST00000357409 TRAV21A0A0B4J279 112 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 GCSAMQ8N6F7 178 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 ADARB2-AS1A8MUL3 147 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 WDR73Q6P4I2 378 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 PAQR4Q8N4S7 273 aaPredicted RBP6.14□□□□□ -1.43
VPS13A-202ENST00000357409 SFXN3Q9BWM7 321 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 APOHP02749 345 aaPredicted RBP6.14□□□□□ -1.43
VPS13A-202ENST00000357409 ANAPC16Q96DE5 110 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 MARVELD1Q9BSK0 173 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 A0A0G2JK05 382 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 LINC00158P58513 81 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 GATD1Q8NB37 220 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 NEU4Q8WWR8 484 aaPredicted RBP6.14□□□□□ -1.43
VPS13A-202ENST00000357409 G6PC2Q9NQR9 355 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 AQP3Q92482 292 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 XCL2Q9UBD3 114 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 CTXND1A0A1B0GTU2 59 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 SYNJ2BPP57105 145 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 HAPLN4Q86UW8 402 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 OR10S1Q8NGN2 331 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 SLC25A28Q96A46 364 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 TRAF4Q9BUZ4 470 aaPredicted RBP6.14□□□□□ -1.43
VPS13A-202ENST00000357409 CNTFRP26992 372 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 RND3P61587 244 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 DUX4L9Q6RFH8 374 aaPredicted RBP6.14□□□□□ -1.43
VPS13A-202ENST00000357409 AICDAQ9GZX7 198 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 A8MWL6 223 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 CENPWQ5EE01 88 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 OR5P3Q8WZ94 311 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 GPR132Q9UNW8 380 aa6.14□□□□□ -1.43
VPS13A-202ENST00000357409 PDE6DO43924 150 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 TMEM186Q96B77 213 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 TMEM50AO95807 157 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 C1QTNF12Q5T7M4 302 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 CLDND2Q8NHS1 167 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 GALNT14Q96FL9 552 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 CBLN4Q9NTU7 201 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 BRWD1Q9NSI6 2320 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 INS-IGF2F8WCM5 200 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 INSP01308 110 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 CRPP02741 224 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 EXOC3-AS1Q8N2X6 119 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 LYZL4Q96KX0 146 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 SCGB3A1Q96QR1 104 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 LRRC37A3O60309 1634 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 RPS11P62280 158 aaKnown RBP eCLIP6.13□□□□□ -1.43
VPS13A-202ENST00000357409 C21orf62Q9NYP8 219 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 TRGV1A0A0A0MS02 117 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 MST1P26927 711 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 GZMMP51124 257 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 TMEM200BQ69YZ2 307 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 CACFD1Q9UGQ2 172 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 JPT1Q9UK76 154 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 ADAMTSL1Q8N6G6 1762 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 SHISA3A0PJX4 238 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 F8VVB4 439 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 F8VWA3 439 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 LRTM2Q8N967 370 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 IGHV1-46P01743 117 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 LEPP41159 167 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 OR10J3Q5JRS4 329 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 C5orf66Q9H5L9 145 aa6.13□□□□□ -1.43
VPS13A-202ENST00000357409 NXT2Q9NPJ8 142 aaKnown RBP6.13□□□□□ -1.43
VPS13A-202ENST00000357409 RGPD3A6NKT7 1758 aaPredicted RBP6.12□□□□□ -1.43
VPS13A-202ENST00000357409 RGPD4Q7Z3J3 1758 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 ATP5LO75964 103 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 LIMS1P48059 325 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 COL4A1P02462 1669 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 TRAV3A0A0B4J244 114 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 NPIPB8E9PQR5 432 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 NPIPB9F8W1W9 429 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 NPIPB7O75200 414 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 REC114Q7Z4M0 266 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 TMEM167AQ8TBQ9 72 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 TRAV12-2A0A075B6T6 113 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 NCR2O95944 276 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 IGKV1D-13A0A0B4J2D9 117 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 TCRAP04437 139 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 IGKV1-13P0DP09 117 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 ELOVL5Q9NYP7 299 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 K7EM74 188 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 CD8AP01732 235 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 PIP4P2Q8N4L2 257 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 KIR2DL4Q99706 377 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 PEMTQ9UBM1 199 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 A0A0J9YY99 117 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 NDUFA2O43678 99 aa6.12□□□□□ -1.43
VPS13A-202ENST00000357409 TSPAN13O95857 204 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms