RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 Q6AWC8 147 aa19.49■□□□□ 0.71
NPAS3-201ENST00000346562 OR52E5Q8NH55 327 aa19.49■□□□□ 0.71
NPAS3-201ENST00000346562 NUDT10Q8NFP7 164 aa19.48■□□□□ 0.71
NPAS3-201ENST00000346562 NBR2O15453 112 aa19.48■□□□□ 0.71
NPAS3-201ENST00000346562 GHRHP01286 108 aa19.48■□□□□ 0.71
NPAS3-201ENST00000346562 CIARTQ8N365 385 aaPredicted RBP19.48■□□□□ 0.71
NPAS3-201ENST00000346562 WDYHV1Q96HA8 205 aa19.48■□□□□ 0.71
NPAS3-201ENST00000346562 FAM201AQ5SY85 155 aa19.48■□□□□ 0.71
NPAS3-201ENST00000346562 LEMD1Q68G75 181 aa19.48■□□□□ 0.71
NPAS3-201ENST00000346562 METRNQ9UJH8 293 aa19.48■□□□□ 0.71
NPAS3-201ENST00000346562 TBR1Q16650 682 aa19.47■□□□□ 0.71
NPAS3-201ENST00000346562 ZNF506Q5JVG8 444 aa19.47■□□□□ 0.71
NPAS3-201ENST00000346562 LDLRAD2Q5SZI1 272 aa19.47■□□□□ 0.71
NPAS3-201ENST00000346562 TMEM167AQ8TBQ9 72 aa19.47■□□□□ 0.71
NPAS3-201ENST00000346562 WNT10AQ9GZT5 417 aa19.47■□□□□ 0.71
NPAS3-201ENST00000346562 EIF3GO75821 320 aaKnown RBP eCLIP19.47■□□□□ 0.71
NPAS3-201ENST00000346562 LINC00469Q8N7U9 141 aa19.47■□□□□ 0.71
NPAS3-201ENST00000346562 SOD3P08294 240 aa19.47■□□□□ 0.71
NPAS3-201ENST00000346562 LRTM2Q8N967 370 aa19.47■□□□□ 0.71
NPAS3-201ENST00000346562 KCNS1Q96KK3 526 aa19.47■□□□□ 0.71
NPAS3-201ENST00000346562 RPP21Q9H633 154 aaKnown RBP19.47■□□□□ 0.71
NPAS3-201ENST00000346562 TOMM7Q9P0U1 55 aa19.47■□□□□ 0.71
NPAS3-201ENST00000346562 CACNG8Q8WXS5 425 aa19.46■□□□□ 0.71
NPAS3-201ENST00000346562 FAM131CQ96AQ9 280 aa19.46■□□□□ 0.71
NPAS3-201ENST00000346562 CGAP01215 116 aa19.46■□□□□ 0.71
NPAS3-201ENST00000346562 C1QTNF9BB2RNN3 333 aa19.46■□□□□ 0.71
NPAS3-201ENST00000346562 PARD6GQ9BYG4 376 aaPredicted RBP19.46■□□□□ 0.71
NPAS3-201ENST00000346562 MRPL16Q9NX20 251 aaKnown RBP19.46■□□□□ 0.71
NPAS3-201ENST00000346562 AICDAQ9GZX7 198 aa19.46■□□□□ 0.71
NPAS3-201ENST00000346562 TRAV8-6A0A0B4J262 113 aa19.45■□□□□ 0.7
NPAS3-201ENST00000346562 DUSP14O95147 198 aaKnown RBP19.45■□□□□ 0.7
NPAS3-201ENST00000346562 IGHV3-11P01762 117 aa19.45■□□□□ 0.7
NPAS3-201ENST00000346562 GRIFINA4D1Z8 144 aa19.45■□□□□ 0.7
NPAS3-201ENST00000346562 C17orf98A8MV24 154 aa19.45■□□□□ 0.7
NPAS3-201ENST00000346562 IL36BQ9NZH7 164 aa19.45■□□□□ 0.7
NPAS3-201ENST00000346562 MIA3Q5JRA6 1907 aa19.45■□□□□ 0.7
NPAS3-201ENST00000346562 C9orf106Q8NAJ2 232 aa19.45■□□□□ 0.7
NPAS3-201ENST00000346562 THBDP07204 575 aa19.45■□□□□ 0.7
NPAS3-201ENST00000346562 H2BFSP57053 126 aa19.45■□□□□ 0.7
NPAS3-201ENST00000346562 GTSCR1Q86UQ5 136 aa19.45■□□□□ 0.7
NPAS3-201ENST00000346562 FER1L6-AS1Q8NA97 138 aa19.45■□□□□ 0.7
NPAS3-201ENST00000346562 SLC50A1Q9BRV3 221 aa19.45■□□□□ 0.7
NPAS3-201ENST00000346562 A0A0G2JMM0 328 aa19.44■□□□□ 0.7
NPAS3-201ENST00000346562 A0A1W2PPB8 328 aa19.44■□□□□ 0.7
NPAS3-201ENST00000346562 A0A1W2PRS3 328 aa19.44■□□□□ 0.7
NPAS3-201ENST00000346562 KIR3DP1A8MWS1 328 aa19.44■□□□□ 0.7
NPAS3-201ENST00000346562 A0A1B0GUT8 65 aa19.44■□□□□ 0.7
NPAS3-201ENST00000346562 APOHP02749 345 aaPredicted RBP19.44■□□□□ 0.7
NPAS3-201ENST00000346562 TMEM42Q69YG0 159 aa19.44■□□□□ 0.7
NPAS3-201ENST00000346562 RAMP1O60894 148 aa19.44■□□□□ 0.7
NPAS3-201ENST00000346562 TFF3Q07654 80 aa19.44■□□□□ 0.7
NPAS3-201ENST00000346562 C10orf126Q8N4M7 172 aa19.44■□□□□ 0.7
NPAS3-201ENST00000346562 NEUROG1Q92886 237 aa19.44■□□□□ 0.7
NPAS3-201ENST00000346562 C18orf15Q96N68 181 aa19.44■□□□□ 0.7
NPAS3-201ENST00000346562 UBR3Q6ZT12 1888 aa19.44■□□□□ 0.7
NPAS3-201ENST00000346562 STAG3L3P0CL85 134 aa19.44■□□□□ 0.7
NPAS3-201ENST00000346562 CSRP1P21291 193 aaKnown RBP19.43■□□□□ 0.7
NPAS3-201ENST00000346562 Q9H3A6 140 aa19.43■□□□□ 0.7
NPAS3-201ENST00000346562 TRBV7-9A0A0J9YWB2 115 aa19.43■□□□□ 0.7
NPAS3-201ENST00000346562 TCRBV4S1A1TA0A5B7 111 aa19.43■□□□□ 0.7
NPAS3-201ENST00000346562 IGLV3-19P01714 112 aa19.43■□□□□ 0.7
NPAS3-201ENST00000346562 PSG7Q13046 419 aa19.43■□□□□ 0.7
NPAS3-201ENST00000346562 OTORQ9NRC9 128 aa19.43■□□□□ 0.7
NPAS3-201ENST00000346562 OR10J3Q5JRS4 329 aa19.43■□□□□ 0.7
NPAS3-201ENST00000346562 TTC9CQ8N5M4 171 aa19.43■□□□□ 0.7
NPAS3-201ENST00000346562 DTX2Q86UW9 622 aa19.43■□□□□ 0.7
NPAS3-201ENST00000346562 FOXC2Q99958 501 aa19.42■□□□□ 0.7
NPAS3-201ENST00000346562 DSCR9P59020 149 aa19.42■□□□□ 0.7
NPAS3-201ENST00000346562 IFITM3Q01628 133 aa19.42■□□□□ 0.7
NPAS3-201ENST00000346562 KIAA1217Q5T5P2 1943 aa19.42■□□□□ 0.7
NPAS3-201ENST00000346562 MSGN1A6NI15 193 aa19.42■□□□□ 0.7
NPAS3-201ENST00000346562 CRPP02741 224 aa19.42■□□□□ 0.7
NPAS3-201ENST00000346562 NUDT11Q96G61 164 aa19.42■□□□□ 0.7
NPAS3-201ENST00000346562 PVRIGQ6DKI7 326 aa19.42■□□□□ 0.7
NPAS3-201ENST00000346562 KIF13BQ9NQT8 1826 aa19.42■□□□□ 0.7
NPAS3-201ENST00000346562 ATOH7Q8N100 152 aa19.42■□□□□ 0.7
NPAS3-201ENST00000346562 SCN3AQ9NY46 2000 aa19.41■□□□□ 0.7
NPAS3-201ENST00000346562 ZNF98A6NK75 572 aa19.41■□□□□ 0.7
NPAS3-201ENST00000346562 SLC25A20O43772 301 aa19.41■□□□□ 0.7
NPAS3-201ENST00000346562 RCC1LQ96I51 464 aaKnown RBP19.41■□□□□ 0.7
NPAS3-201ENST00000346562 CBLN1P23435 193 aa19.41■□□□□ 0.7
NPAS3-201ENST00000346562 REPIN1Q9BWE0 567 aaKnown RBP19.41■□□□□ 0.7
NPAS3-201ENST00000346562 FAM71F2Q6NXP2 309 aa19.4■□□□□ 0.7
NPAS3-201ENST00000346562 OR5AN1Q8NGI8 311 aa19.4■□□□□ 0.7
NPAS3-201ENST00000346562 VGLL1Q99990 258 aa19.4■□□□□ 0.7
NPAS3-201ENST00000346562 TDRD15B5MCY1 1934 aaKnown RBP19.4■□□□□ 0.7
NPAS3-201ENST00000346562 CD8AP01732 235 aa19.4■□□□□ 0.7
NPAS3-201ENST00000346562 A0A0G2JK05 382 aa19.4■□□□□ 0.7
NPAS3-201ENST00000346562 SAA1P0DJI8 122 aaPredicted RBP19.4■□□□□ 0.7
NPAS3-201ENST00000346562 FOXA3P55318 350 aaPredicted RBP19.4■□□□□ 0.7
NPAS3-201ENST00000346562 PSMG4Q5JS54 123 aa19.4■□□□□ 0.7
NPAS3-201ENST00000346562 C8orf46Q8TAG6 207 aa19.4■□□□□ 0.7
NPAS3-201ENST00000346562 IMMP1LQ96LU5 166 aa19.4■□□□□ 0.7
NPAS3-201ENST00000346562 UCP1P25874 307 aa19.39■□□□□ 0.7
NPAS3-201ENST00000346562 C1QL2Q7Z5L3 287 aa19.39■□□□□ 0.7
NPAS3-201ENST00000346562 ASCL2Q99929 193 aa19.39■□□□□ 0.7
NPAS3-201ENST00000346562 MCM3APO60318 1980 aa19.39■□□□□ 0.7
NPAS3-201ENST00000346562 PQLC2LA1A4F0 135 aa19.39■□□□□ 0.69
NPAS3-201ENST00000346562 SAA2-SAA4A0A096LPE2 208 aa19.39■□□□□ 0.69
NPAS3-201ENST00000346562 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms