RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 GBGT1Q8N5D6 347 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 OR10G8Q8NGN5 311 aa13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 YTHDF2Q9Y5A9 579 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-201ENST00000344626 TLN2Q9Y4G6 2542 aa13.67□□□□□ -0.22
SMARCA4-201ENST00000344626 MYO9AB2RTY4 2548 aa13.67□□□□□ -0.22
SMARCA4-201ENST00000344626 TP53RKQ96S44 253 aa13.67□□□□□ -0.22
SMARCA4-201ENST00000344626 PROK2Q9HC23 129 aa13.67□□□□□ -0.22
SMARCA4-201ENST00000344626 OR5AC2Q9NZP5 309 aa13.67□□□□□ -0.22
SMARCA4-201ENST00000344626 PEMTQ9UBM1 199 aa13.67□□□□□ -0.22
SMARCA4-201ENST00000344626 FLNBO75369 2602 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-201ENST00000344626 SNRPCP09234 159 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-201ENST00000344626 ADAMTS9Q9P2N4 1935 aa13.67□□□□□ -0.22
SMARCA4-201ENST00000344626 IGHV3OR16-13A0A075B7E8 117 aa13.67□□□□□ -0.22
SMARCA4-201ENST00000344626 IGHV3-74A0A0B4J1X5 117 aa13.67□□□□□ -0.22
SMARCA4-201ENST00000344626 OOSP1A8MZH6 123 aa13.67□□□□□ -0.22
SMARCA4-201ENST00000344626 OR51G1Q8NGK1 321 aa13.67□□□□□ -0.22
SMARCA4-201ENST00000344626 VOPP1Q96AW1 172 aa13.67□□□□□ -0.22
SMARCA4-201ENST00000344626 SAA2-SAA4A0A096LPE2 208 aa13.67□□□□□ -0.22
SMARCA4-201ENST00000344626 SAA2P0DJI9 122 aaPredicted RBP13.67□□□□□ -0.22
SMARCA4-201ENST00000344626 HKR1P10072 659 aa13.67□□□□□ -0.22
SMARCA4-201ENST00000344626 SUMO1P63165 101 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-201ENST00000344626 NPIPB3Q92617 1050 aa13.67□□□□□ -0.22
SMARCA4-201ENST00000344626 WNT2P09544 360 aa13.66□□□□□ -0.22
SMARCA4-201ENST00000344626 KIF26AQ9ULI4 1882 aaPredicted RBP13.66□□□□□ -0.22
SMARCA4-201ENST00000344626 C17orf98A8MV24 154 aa13.66□□□□□ -0.22
SMARCA4-201ENST00000344626 PRNTQ86SH4 94 aa13.66□□□□□ -0.22
SMARCA4-201ENST00000344626 SHISA3A0PJX4 238 aa13.66□□□□□ -0.22
SMARCA4-201ENST00000344626 MFSD2BA6NFX1 497 aa13.66□□□□□ -0.22
SMARCA4-201ENST00000344626 PRR32B1ATL7 298 aa13.66□□□□□ -0.22
SMARCA4-201ENST00000344626 HSBP1O75506 76 aa13.66□□□□□ -0.22
SMARCA4-201ENST00000344626 EFNB1P98172 346 aa13.66□□□□□ -0.22
SMARCA4-201ENST00000344626 MINOS1Q5TGZ0 78 aa13.66□□□□□ -0.22
SMARCA4-201ENST00000344626 C21orf62Q9NYP8 219 aa13.66□□□□□ -0.22
SMARCA4-201ENST00000344626 MINOS1-NBL1R4GNA1 71 aa13.66□□□□□ -0.22
SMARCA4-201ENST00000344626 M0R1W7 72 aa13.66□□□□□ -0.22
SMARCA4-201ENST00000344626 SIAH2O43255 324 aa13.66□□□□□ -0.22
SMARCA4-201ENST00000344626 UCP1P25874 307 aa13.66□□□□□ -0.22
SMARCA4-201ENST00000344626 MIC13Q5XKP0 118 aa13.66□□□□□ -0.22
SMARCA4-201ENST00000344626 FAM89BQ8N5H3 189 aa13.66□□□□□ -0.22
SMARCA4-201ENST00000344626 OR4B1Q8NGF8 309 aa13.66□□□□□ -0.22
SMARCA4-201ENST00000344626 MRPL32Q9BYC8 188 aaKnown RBP13.66□□□□□ -0.22
SMARCA4-201ENST00000344626 CA2P00918 260 aa13.65□□□□□ -0.22
SMARCA4-201ENST00000344626 IGHV3-48P01763 117 aa13.65□□□□□ -0.22
SMARCA4-201ENST00000344626 TMEM155Q4W5P6 130 aa13.65□□□□□ -0.22
SMARCA4-201ENST00000344626 PLXNA2O75051 1894 aa13.65□□□□□ -0.22
SMARCA4-201ENST00000344626 C8orf88P0DMB2 117 aa13.65□□□□□ -0.22
SMARCA4-201ENST00000344626 OR10C1Q96KK4 312 aa13.65□□□□□ -0.22
SMARCA4-201ENST00000344626 PNRC2Q9NPJ4 139 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-201ENST00000344626 LINC00527Q9UJ94 153 aa13.65□□□□□ -0.22
SMARCA4-201ENST00000344626 NHLRC3Q5JS37 347 aa13.65□□□□□ -0.22
SMARCA4-201ENST00000344626 SYT8Q8NBV8 401 aa13.65□□□□□ -0.22
SMARCA4-201ENST00000344626 PRSS3P2Q8NHM4 247 aa13.65□□□□□ -0.22
SMARCA4-201ENST00000344626 GALNT14Q96FL9 552 aa13.65□□□□□ -0.22
SMARCA4-201ENST00000344626 WNK1Q9H4A3 2382 aa13.65□□□□□ -0.22
SMARCA4-201ENST00000344626 TCRBV4S1A1TA0A5B7 111 aa13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 CEACAM4O75871 244 aa13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 IL4P05112 153 aa13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 ZP1P60852 638 aa13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 NUTF2P61970 127 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 SMAGPQ0VAQ4 97 aa13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 CR1LQ2VPA4 569 aa13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 VMO1Q7Z5L0 202 aa13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 GGACTQ9BVM4 153 aa13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 S4R3C0 116 aa13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 HGFACQ04756 655 aa13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 IFI27L2Q9H2X8 130 aa13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 BATFQ16520 125 aa13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 TMEM177Q53S58 311 aa13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 LDLRAD3Q86YD5 345 aa13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 TEX45Q8NA69 505 aa13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 B4DEV8 164 aa13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 ZP3P21754 424 aa13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 SRSF7Q16629 238 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 C9orf62Q8N4C0 152 aa13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 FAM103A1Q9BTL3 118 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 RSG1Q9BU20 258 aa13.64□□□□□ -0.23
SMARCA4-201ENST00000344626 H3BUX3 64 aa13.63□□□□□ -0.23
SMARCA4-201ENST00000344626 RUNX1Q01196 453 aa13.63□□□□□ -0.23
SMARCA4-201ENST00000344626 TMEM219Q86XT9 240 aa13.63□□□□□ -0.23
SMARCA4-201ENST00000344626 RNASEH2CQ8TDP1 164 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-201ENST00000344626 UTRNP46939 3433 aa13.63□□□□□ -0.23
SMARCA4-201ENST00000344626 SPINK4O60575 86 aa13.63□□□□□ -0.23
SMARCA4-201ENST00000344626 MSMBP08118 114 aa13.63□□□□□ -0.23
SMARCA4-201ENST00000344626 SPANXN1Q5VSR9 72 aa13.63□□□□□ -0.23
SMARCA4-201ENST00000344626 HEPN1Q6WQI6 88 aa13.63□□□□□ -0.23
SMARCA4-201ENST00000344626 AP4M1O00189 453 aa13.63□□□□□ -0.23
SMARCA4-201ENST00000344626 FCN1O00602 326 aa13.63□□□□□ -0.23
SMARCA4-201ENST00000344626 GATA3P23771 443 aa13.63□□□□□ -0.23
SMARCA4-201ENST00000344626 RPUSD1Q9UJJ7 312 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-201ENST00000344626 RBFOX2O43251 390 aaKnown RBP eCLIP13.63□□□□□ -0.233e-7■■□□□ 14.3
SMARCA4-201ENST00000344626 KLRD1Q13241 179 aa13.63□□□□□ -0.23
SMARCA4-201ENST00000344626 GATAD1Q8WUU5 269 aa13.63□□□□□ -0.23
SMARCA4-201ENST00000344626 AQP10Q96PS8 301 aa13.63□□□□□ -0.23
SMARCA4-201ENST00000344626 OR51M1Q9H341 326 aa13.63□□□□□ -0.23
SMARCA4-201ENST00000344626 IGHV3-49A0A0A0MS15 119 aa13.63□□□□□ -0.23
SMARCA4-201ENST00000344626 CAMPP49913 170 aa13.63□□□□□ -0.23
SMARCA4-201ENST00000344626 PGPA6NDG6 321 aa13.62□□□□□ -0.23
SMARCA4-201ENST00000344626 MSGN1A6NI15 193 aa13.62□□□□□ -0.23
SMARCA4-201ENST00000344626 DEFB121Q5J5C9 76 aa13.62□□□□□ -0.23
SMARCA4-201ENST00000344626 MOB4Q9Y3A3 225 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms