RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 EAF1Q96JC9 268 aaPredicted RBP17.66■□□□□ 0.42
CACNB1-201ENST00000344140 REG4Q9BYZ8 158 aa17.66■□□□□ 0.42
CACNB1-201ENST00000344140 TPSG1Q9NRR2 321 aa17.66■□□□□ 0.42
CACNB1-201ENST00000344140 RRHO14718 337 aa17.65■□□□□ 0.42
CACNB1-201ENST00000344140 SPP1P10451 314 aa17.65■□□□□ 0.42
CACNB1-201ENST00000344140 BRS3P32247 399 aa17.65■□□□□ 0.42
CACNB1-201ENST00000344140 EBI3Q14213 229 aa17.65■□□□□ 0.42
CACNB1-201ENST00000344140 MMDQ15546 238 aa17.65■□□□□ 0.42
CACNB1-201ENST00000344140 SLC25A24Q6NUK1 477 aa17.65■□□□□ 0.42
CACNB1-201ENST00000344140 NPBQ8NG41 125 aa17.65■□□□□ 0.42
CACNB1-201ENST00000344140 GNPNAT1Q96EK6 184 aaPredicted RBP17.65■□□□□ 0.42
CACNB1-201ENST00000344140 RNF223E7ERA6 249 aa17.65■□□□□ 0.42
CACNB1-201ENST00000344140 NBR2O15453 112 aa17.65■□□□□ 0.42
CACNB1-201ENST00000344140 SNRNP70P08621 437 aaKnown RBP17.65■□□□□ 0.42
CACNB1-201ENST00000344140 NPY1RP25929 384 aa17.65■□□□□ 0.42
CACNB1-201ENST00000344140 HES1Q14469 280 aa17.65■□□□□ 0.42
CACNB1-201ENST00000344140 MRGPRG-AS1Q2M3A8 158 aa17.65■□□□□ 0.42
CACNB1-201ENST00000344140 PIP4P2Q8N4L2 257 aa17.65■□□□□ 0.42
CACNB1-201ENST00000344140 PCNPQ8WW12 178 aaKnown RBP17.65■□□□□ 0.42
CACNB1-201ENST00000344140 PARD6GQ9BYG4 376 aaPredicted RBP17.65■□□□□ 0.42
CACNB1-201ENST00000344140 KIAA1456Q9P272 454 aa17.65■□□□□ 0.42
CACNB1-201ENST00000344140 LINC00862A6NCI5 91 aa17.64■□□□□ 0.41
CACNB1-201ENST00000344140 ATP6V1G1O75348 118 aa17.64■□□□□ 0.41
CACNB1-201ENST00000344140 PAX6P26367 422 aa17.64■□□□□ 0.41
CACNB1-201ENST00000344140 PJVKQ0ZLH3 352 aa17.64■□□□□ 0.41
CACNB1-201ENST00000344140 MRPL41Q8IXM3 137 aaKnown RBP17.64■□□□□ 0.41
CACNB1-201ENST00000344140 SCGB1C1Q8TD33 95 aa17.64■□□□□ 0.41
CACNB1-201ENST00000344140 TMEM147Q9BVK8 224 aa17.64■□□□□ 0.41
CACNB1-201ENST00000344140 FAM106CPP0CH98 169 aa17.63■□□□□ 0.41
CACNB1-201ENST00000344140 ERHP84090 104 aaKnown RBP17.63■□□□□ 0.41
CACNB1-201ENST00000344140 HNF4GQ14541 408 aa17.63■□□□□ 0.41
CACNB1-201ENST00000344140 PLGLAQ15195 96 aa17.63■□□□□ 0.41
CACNB1-201ENST00000344140 ETV3LQ6ZN32 361 aa17.63■□□□□ 0.41
CACNB1-201ENST00000344140 FBXL15Q9H469 300 aa17.63■□□□□ 0.41
CACNB1-201ENST00000344140 TRAV40A0A0B4J280 105 aa17.63■□□□□ 0.41
CACNB1-201ENST00000344140 NDUFA3O95167 84 aa17.63■□□□□ 0.41
CACNB1-201ENST00000344140 ATP6V0CP27449 155 aa17.63■□□□□ 0.41
CACNB1-201ENST00000344140 GGACTQ9BVM4 153 aa17.63■□□□□ 0.41
CACNB1-201ENST00000344140 UQCC1Q9NVA1 299 aa17.63■□□□□ 0.41
CACNB1-201ENST00000344140 CSMD2Q7Z408 3487 aa17.62■□□□□ 0.41
CACNB1-201ENST00000344140 J3QLI3 93 aa17.62■□□□□ 0.41
CACNB1-201ENST00000344140 FGF16O43320 207 aa17.62■□□□□ 0.41
CACNB1-201ENST00000344140 IFNA4P05014 189 aa17.62■□□□□ 0.41
CACNB1-201ENST00000344140 FAM157CP0CG43 387 aa17.62■□□□□ 0.41
CACNB1-201ENST00000344140 SNCAP37840 140 aa17.62■□□□□ 0.41
CACNB1-201ENST00000344140 COMPP49747 757 aaPredicted RBP17.62■□□□□ 0.41
CACNB1-201ENST00000344140 SULT1A2P50226 295 aa17.62■□□□□ 0.41
CACNB1-201ENST00000344140 TNXAQ16473 311 aa17.62■□□□□ 0.41
CACNB1-201ENST00000344140 LRRC75BQ2VPJ9 315 aa17.62■□□□□ 0.41
CACNB1-201ENST00000344140 Q8N6K4 173 aa17.62■□□□□ 0.41
CACNB1-201ENST00000344140 TMEM170AQ8WVE7 144 aa17.62■□□□□ 0.41
CACNB1-201ENST00000344140 CA2P00918 260 aa17.61■□□□□ 0.41
CACNB1-201ENST00000344140 CD24P25063 80 aa17.61■□□□□ 0.41
CACNB1-201ENST00000344140 RPL27AP46776 148 aaKnown RBP17.61■□□□□ 0.41
CACNB1-201ENST00000344140 VWC2Q2TAL6 325 aa17.61■□□□□ 0.41
CACNB1-201ENST00000344140 BSXQ3C1V8 233 aa17.61■□□□□ 0.41
CACNB1-201ENST00000344140 C10orf55Q5SWW7 151 aa17.61■□□□□ 0.41
CACNB1-201ENST00000344140 OR10W1Q8NGF6 305 aa17.61■□□□□ 0.41
CACNB1-201ENST00000344140 Q96MF0 132 aa17.61■□□□□ 0.41
CACNB1-201ENST00000344140 SH3BGRL3Q9H299 93 aa17.61■□□□□ 0.41
CACNB1-201ENST00000344140 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.61■□□□□ 0.41
CACNB1-201ENST00000344140 E7EUB6 86 aa17.61■□□□□ 0.41
CACNB1-201ENST00000344140 RAB5CP51148 216 aa17.61■□□□□ 0.41
CACNB1-201ENST00000344140 C2orf83Q53S99 150 aa17.61■□□□□ 0.41
CACNB1-201ENST00000344140 KRTAP1-3Q8IUG1 177 aa17.61■□□□□ 0.41
CACNB1-201ENST00000344140 CGB1A6NKQ9 187 aa17.6■□□□□ 0.41
CACNB1-201ENST00000344140 TMEM11P17152 192 aa17.6■□□□□ 0.41
CACNB1-201ENST00000344140 SAT2Q96F10 170 aaPredicted RBP17.6■□□□□ 0.41
CACNB1-201ENST00000344140 WDR61Q9GZS3 305 aaKnown RBP17.6■□□□□ 0.41
CACNB1-201ENST00000344140 MAP1AP78559 2803 aaPredicted RBP17.6■□□□□ 0.41
CACNB1-201ENST00000344140 UBE2L5PA0A1B0GUS4 154 aa17.59■□□□□ 0.41
CACNB1-201ENST00000344140 PRSS46E5RG02 174 aa17.59■□□□□ 0.41
CACNB1-201ENST00000344140 C5orf64Q2M2E5 130 aa17.59■□□□□ 0.41
CACNB1-201ENST00000344140 RUSC1-AS1Q66K80 236 aa17.59■□□□□ 0.41
CACNB1-201ENST00000344140 OR2G3Q8NGZ4 309 aa17.59■□□□□ 0.41
CACNB1-201ENST00000344140 FOXC2Q99958 501 aa17.59■□□□□ 0.41
CACNB1-201ENST00000344140 MED9Q9NWA0 146 aa17.59■□□□□ 0.41
CACNB1-201ENST00000344140 ITPR2Q14571 2701 aa17.59■□□□□ 0.41
CACNB1-201ENST00000344140 IGHV3OR16-10A0A075B7F0 116 aa17.58■□□□□ 0.41
CACNB1-201ENST00000344140 ZNF705EA8MWA4 302 aaPredicted RBP17.58■□□□□ 0.41
CACNB1-201ENST00000344140 TGFAP01135 160 aa17.58■□□□□ 0.41
CACNB1-201ENST00000344140 GNB1P62873 340 aa17.58■□□□□ 0.41
CACNB1-201ENST00000344140 DLK1P80370 383 aa17.58■□□□□ 0.41
CACNB1-201ENST00000344140 C1RLQ9NZP8 487 aa17.58■□□□□ 0.41
CACNB1-201ENST00000344140 A0A1B0GW64 132 aa17.58■□□□□ 0.4
CACNB1-201ENST00000344140 UMAD1C9J7I0 102 aa17.58■□□□□ 0.4
CACNB1-201ENST00000344140 IGHV4-38-2P0DP08 117 aa17.58■□□□□ 0.4
CACNB1-201ENST00000344140 RNASE2P10153 161 aaKnown RBP17.58■□□□□ 0.4
CACNB1-201ENST00000344140 SUB1P53999 127 aaKnown RBP eCLIP17.58■□□□□ 0.4
CACNB1-201ENST00000344140 RUNX1Q01196 453 aa17.58■□□□□ 0.4
CACNB1-201ENST00000344140 WT1-ASQ06250 92 aa17.58■□□□□ 0.4
CACNB1-201ENST00000344140 TMEM249Q2WGJ8 235 aa17.58■□□□□ 0.4
CACNB1-201ENST00000344140 HSD17B13Q7Z5P4 300 aaPredicted RBP17.58■□□□□ 0.4
CACNB1-201ENST00000344140 TAF15Q92804 592 aaKnown RBP eCLIP17.58■□□□□ 0.4
CACNB1-201ENST00000344140 PSMG3Q9BT73 122 aaPredicted RBP17.58■□□□□ 0.4
CACNB1-201ENST00000344140 PLA2G2EQ9NZK7 142 aa17.58■□□□□ 0.4
CACNB1-201ENST00000344140 VPS13CQ709C8 3753 aa17.58■□□□□ 0.4
CACNB1-201ENST00000344140 OR13C7P0DN81 318 aa17.57■□□□□ 0.4
CACNB1-201ENST00000344140 IGHV4-31P0DP07 118 aa17.57■□□□□ 0.4
CACNB1-201ENST00000344140 BRD3OSQ6XYD6 125 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms