RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 SERF1AO75920 110 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 RGRP47804 291 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 PDGFRLQ15198 375 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 DTX1Q86Y01 620 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 PDE6GP18545 87 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 APOBEC1P41238 236 aaKnown RBP3.21□□□□□ -1.9
SYNE2-202ENST00000344113 C6orf226Q5I0X4 101 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 APOBEC3DQ96AK3 386 aaPredicted RBP3.21□□□□□ -1.9
SYNE2-202ENST00000344113 TRAV26-1A0A087WT03 109 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 A0A0G2JK05 382 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 IQCF6A8MYZ5 107 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 PYYP10082 97 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 ZNF252P-AS1Q0IIN9 211 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 hADV29S1A0JD25 119 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 TCRAP04437 139 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 COL9A1P20849 921 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 ZNF146Q15072 292 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 C18orf32Q8TCD1 76 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 LOXL4Q96JB6 756 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 RPP21Q9H633 154 aaKnown RBP3.21□□□□□ -1.9
SYNE2-202ENST00000344113 CYTL1Q9NRR1 136 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 LOXL2Q9Y4K0 774 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 TIMM8AO60220 97 aaPredicted RBP3.21□□□□□ -1.9
SYNE2-202ENST00000344113 LILRA6Q6PI73 481 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 ZIC4Q8N9L1 334 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 SLC37A2Q8TED4 501 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 FZR1Q9UM11 496 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 ZNF840PA6NDX5 716 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 PGLYRP3Q96LB9 341 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 NHSL1Q5SYE7 1610 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 DYNLT3P51808 116 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 CCL20P78556 96 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 CD164L2Q6UWJ8 174 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 Q6ZS49 121 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 TMEM86BQ8N661 226 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 SMRP1Q8NCR6 262 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 CLUHP3Q96NS8 147 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 WSB2Q9NYS7 404 aaPredicted RBP3.21□□□□□ -1.9
SYNE2-202ENST00000344113 EML2O95834 649 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 NKG7Q16617 165 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 ANAPC10Q9UM13 185 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 ETV2O00321 342 aaPredicted RBP3.21□□□□□ -1.9
SYNE2-202ENST00000344113 BCE1O60756 84 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 TMEM155Q4W5P6 130 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 SLC25A48Q6ZT89 311 aaKnown RBP3.21□□□□□ -1.9
SYNE2-202ENST00000344113 TMEM133Q9H2Q1 129 aa3.21□□□□□ -1.9
SYNE2-202ENST00000344113 TMEM222Q9H0R3 208 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 MLF2Q15773 248 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-202ENST00000344113 MRPL2Q5T653 305 aaKnown RBP3.2□□□□□ -1.9
SYNE2-202ENST00000344113 SPANXN1Q5VSR9 72 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 TEPPQ6URK8 271 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 ST8SIA1Q92185 356 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 NHP2Q9NX24 153 aaKnown RBP3.2□□□□□ -1.9
SYNE2-202ENST00000344113 TRBV5-7A0A0A0MS05 114 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 DCAF12L2Q5VW00 463 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 OR52N5Q8NH56 324 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 HIGD1CA8MV81 97 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 UPK3AO75631 287 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 SIRT6Q8N6T7 355 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 GFRA4Q9GZZ7 299 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 INSIG2Q9Y5U4 225 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 A0A1W2PQF6 199 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 H3BTX0 84 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 PTGDSP41222 190 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 ZNF645Q8N7E2 425 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 TMEM99Q8N816 258 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 COL2A1P02458 1487 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-202ENST00000344113 FAM90A9PA6NNJ1 464 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 COX8AP10176 69 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 SYNJ2BPP57105 145 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 KISS1Q15726 138 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 IFI27L1Q96BM0 104 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 U3KQE9 123 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 PRRG2O14669 202 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 PIRTP0C851 137 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 LGALS7P47929 136 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 FOXG1P55316 489 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-202ENST00000344113 RRN3P1Q2M238 152 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 VN1R2Q8NFZ6 395 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 IGFBPL1Q8WX77 278 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 COL22A1Q8NFW1 1626 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-202ENST00000344113 POLQO75417 2590 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 F5H697 171 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 LDB3O75112 727 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 GZMHP20718 246 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 CTRLP40313 264 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 TSKUQ8WUA8 353 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 FRG2CA6NGY1 282 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 ORMDL2Q53FV1 153 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 NUP35Q8NFH5 326 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 FAM90A2PQ658T7 463 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 hCG_38984A0A1B0GV85 526 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 OSCARQ8IYS5 282 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 NDUFV3P56181 108 aaKnown RBP3.2□□□□□ -1.9
SYNE2-202ENST00000344113 FAAP20Q6NZ36 180 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 NKAPP1Q8N9T2 125 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 UPK2O00526 184 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 FAM219BQ5XKK7 198 aa3.2□□□□□ -1.9
SYNE2-202ENST00000344113 FAM53AQ6NSI3 398 aaPredicted RBP3.2□□□□□ -1.9
SYNE2-202ENST00000344113 UFSP1Q6NVU6 142 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms