RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 SPSB3Q6PJ21 355 aa12.7□□□□□ -0.38
MUC1-204ENST00000343256 CMTM3Q96MX0 182 aa12.7□□□□□ -0.38
MUC1-204ENST00000343256 HRASLSQ9HDD0 168 aa12.7□□□□□ -0.38
MUC1-204ENST00000343256 C21orf62Q9NYP8 219 aa12.7□□□□□ -0.38
MUC1-204ENST00000343256 IGKV1D-13A0A0B4J2D9 117 aa12.69□□□□□ -0.38
MUC1-204ENST00000343256 SLC17A2O00624 439 aa12.69□□□□□ -0.38
MUC1-204ENST00000343256 MYL12BO14950 172 aa12.69□□□□□ -0.38
MUC1-204ENST00000343256 IGKV1-13P0DP09 117 aa12.69□□□□□ -0.38
MUC1-204ENST00000343256 RAB11BQ15907 218 aa12.69□□□□□ -0.38
MUC1-204ENST00000343256 TIMM50Q3ZCQ8 353 aa12.69□□□□□ -0.38
MUC1-204ENST00000343256 Q56UQ5 140 aa12.69□□□□□ -0.38
MUC1-204ENST00000343256 TCF24Q7RTU0 167 aa12.69□□□□□ -0.38
MUC1-204ENST00000343256 SCARB1Q8WTV0 552 aa12.69□□□□□ -0.38
MUC1-204ENST00000343256 RAB3CQ96E17 227 aa12.69□□□□□ -0.38
MUC1-204ENST00000343256 C9orf16Q9BUW7 83 aa12.69□□□□□ -0.38
MUC1-204ENST00000343256 TAS2R8Q9NYW2 309 aa12.69□□□□□ -0.38
MUC1-204ENST00000343256 AK6Q9Y3D8 172 aaKnown RBP12.69□□□□□ -0.38
MUC1-204ENST00000343256 NACAE9PAV3 2078 aa12.69□□□□□ -0.38
MUC1-204ENST00000343256 NUPL2O15504 423 aaKnown RBP12.68□□□□□ -0.38
MUC1-204ENST00000343256 DENRO43583 198 aaKnown RBP12.68□□□□□ -0.38
MUC1-204ENST00000343256 YIF1AO95070 293 aa12.68□□□□□ -0.38
MUC1-204ENST00000343256 HRASP01112 189 aa12.68□□□□□ -0.38
MUC1-204ENST00000343256 PAFAH1B2P68402 229 aa12.68□□□□□ -0.38
MUC1-204ENST00000343256 EIF4EBP1Q13541 118 aaPredicted RBP12.68□□□□□ -0.38
MUC1-204ENST00000343256 MFSD4AQ8N468 514 aa12.68□□□□□ -0.38
MUC1-204ENST00000343256 ZNF555Q8NEP9 628 aa12.68□□□□□ -0.38
MUC1-204ENST00000343256 BET1LQ9NYM9 111 aa12.68□□□□□ -0.38
MUC1-204ENST00000343256 TBC1D24Q9ULP9 559 aa12.68□□□□□ -0.38
MUC1-204ENST00000343256 DNASE2O00115 360 aaPredicted RBP12.67□□□□□ -0.38
MUC1-204ENST00000343256 CIB2O75838 187 aa12.67□□□□□ -0.38
MUC1-204ENST00000343256 HLA-DQB1P01920 261 aa12.67□□□□□ -0.38
MUC1-204ENST00000343256 C2orf76Q3KRA6 126 aa12.67□□□□□ -0.38
MUC1-204ENST00000343256 LIPKQ5VXJ0 399 aa12.67□□□□□ -0.38
MUC1-204ENST00000343256 TRPT1Q86TN4 253 aaKnown RBP12.67□□□□□ -0.38
MUC1-204ENST00000343256 GDPD1Q8N9F7 314 aa12.67□□□□□ -0.38
MUC1-204ENST00000343256 HSD17B10Q99714 261 aaKnown RBP12.67□□□□□ -0.38
MUC1-204ENST00000343256 MS4A6AQ9H2W1 248 aa12.67□□□□□ -0.38
MUC1-204ENST00000343256 OR2W1Q9Y3N9 320 aa12.67□□□□□ -0.38
MUC1-204ENST00000343256 TMEM272A0A1B0GTI8 110 aa12.66□□□□□ -0.38
MUC1-204ENST00000343256 CTSGP08311 255 aa12.66□□□□□ -0.38
MUC1-204ENST00000343256 OR13C7P0DN81 318 aa12.66□□□□□ -0.38
MUC1-204ENST00000343256 WT1-ASQ06250 92 aa12.66□□□□□ -0.38
MUC1-204ENST00000343256 LILRB2Q8N423 598 aa12.66□□□□□ -0.38
MUC1-204ENST00000343256 MS4A15Q8N5U1 240 aa12.66□□□□□ -0.38
MUC1-204ENST00000343256 FAM3DQ96BQ1 224 aa12.66□□□□□ -0.38
MUC1-204ENST00000343256 COMMD5Q9GZQ3 224 aa12.66□□□□□ -0.38
MUC1-204ENST00000343256 TRAV14DV4A0A0A6YYC5 116 aa12.65□□□□□ -0.38
MUC1-204ENST00000343256 IGHV3-66A0A0C4DH42 116 aa12.65□□□□□ -0.38
MUC1-204ENST00000343256 KNCNA6PVL3 124 aa12.65□□□□□ -0.38
MUC1-204ENST00000343256 K7EIM0 57 aa12.65□□□□□ -0.38
MUC1-204ENST00000343256 UPK2O00526 184 aa12.65□□□□□ -0.38
MUC1-204ENST00000343256 MFNGO00587 321 aa12.65□□□□□ -0.38
MUC1-204ENST00000343256 DFFBO76075 338 aa12.65□□□□□ -0.38
MUC1-204ENST00000343256 UCHL1P09936 223 aa12.65□□□□□ -0.38
MUC1-204ENST00000343256 NANOGP1Q8N7R0 232 aa12.65□□□□□ -0.38
MUC1-204ENST00000343256 CSNK1G2-AS1Q8NCQ2 148 aa12.65□□□□□ -0.38
MUC1-204ENST00000343256 ST8SIA2Q92186 375 aa12.65□□□□□ -0.38
MUC1-204ENST00000343256 OR10C1Q96KK4 312 aa12.65□□□□□ -0.38
MUC1-204ENST00000343256 TMEM14BQ9NUH8 114 aa12.65□□□□□ -0.38
MUC1-204ENST00000343256 SMPD3Q9NY59 655 aaPredicted RBP12.65□□□□□ -0.38
MUC1-204ENST00000343256 ELF5Q9UKW6 265 aaPredicted RBP12.65□□□□□ -0.38
MUC1-204ENST00000343256 CYB5BO43169 146 aa12.64□□□□□ -0.39
MUC1-204ENST00000343256 TNFSF12O43508 249 aa12.64□□□□□ -0.39
MUC1-204ENST00000343256 APOHP02749 345 aaPredicted RBP12.64□□□□□ -0.39
MUC1-204ENST00000343256 SERPINE2P07093 398 aa12.64□□□□□ -0.39
MUC1-204ENST00000343256 SPP1P10451 314 aa12.64□□□□□ -0.39
MUC1-204ENST00000343256 NPY1RP25929 384 aa12.64□□□□□ -0.39
MUC1-204ENST00000343256 TALDO1P37837 337 aa12.64□□□□□ -0.39
MUC1-204ENST00000343256 TMEM41BQ5BJD5 291 aa12.64□□□□□ -0.39
MUC1-204ENST00000343256 MORN3Q6PF18 240 aaPredicted RBP12.64□□□□□ -0.39
MUC1-204ENST00000343256 OR10R2Q8NGX6 335 aa12.64□□□□□ -0.39
MUC1-204ENST00000343256 SRSF8Q9BRL6 282 aaKnown RBP12.64□□□□□ -0.39
MUC1-204ENST00000343256 QTRT1Q9BXR0 403 aaKnown RBP12.64□□□□□ -0.39
MUC1-204ENST00000343256 ST8SIA3O43173 380 aa12.63□□□□□ -0.39
MUC1-204ENST00000343256 SLC22A5O76082 557 aa12.63□□□□□ -0.39
MUC1-204ENST00000343256 HIST1H1DP16402 221 aaKnown RBP12.63□□□□□ -0.39
MUC1-204ENST00000343256 RPL11P62913 178 aaKnown RBP12.63□□□□□ -0.39
MUC1-204ENST00000343256 RELQ04864 619 aaPredicted RBP12.63□□□□□ -0.39
MUC1-204ENST00000343256 Q6ZS49 121 aa12.63□□□□□ -0.39
MUC1-204ENST00000343256 AHSA2Q719I0 299 aa12.63□□□□□ -0.39
MUC1-204ENST00000343256 DGCR14Q96DF8 476 aaKnown RBP12.63□□□□□ -0.39
MUC1-204ENST00000343256 RABAC1Q9UI14 185 aa12.63□□□□□ -0.39
MUC1-204ENST00000343256 RAB22AQ9UL26 194 aa12.63□□□□□ -0.39
MUC1-204ENST00000343256 RNF212Q495C1 297 aa12.62□□□□□ -0.39
MUC1-204ENST00000343256 HES5Q5TA89 166 aa12.62□□□□□ -0.39
MUC1-204ENST00000343256 ZNF66Q6ZN08 573 aa12.62□□□□□ -0.39
MUC1-204ENST00000343256 SPAG16Q8N0X2 631 aa12.62□□□□□ -0.39
MUC1-204ENST00000343256 TMEM203Q969S6 136 aa12.62□□□□□ -0.39
MUC1-204ENST00000343256 ATP6V0BQ99437 205 aa12.62□□□□□ -0.39
MUC1-204ENST00000343256 F11RQ9Y624 299 aaKnown RBP12.62□□□□□ -0.39
MUC1-204ENST00000343256 EIF4EP06730 217 aaKnown RBP12.61□□□□□ -0.39
MUC1-204ENST00000343256 TRAPPC2P0DI81 140 aa12.61□□□□□ -0.39
MUC1-204ENST00000343256 TRAPPC2BP0DI82 140 aa12.61□□□□□ -0.39
MUC1-204ENST00000343256 INAFM2P0DMQ5 153 aa12.61□□□□□ -0.39
MUC1-204ENST00000343256 GADD45AP24522 165 aa12.61□□□□□ -0.39
MUC1-204ENST00000343256 SSX1Q16384 188 aa12.61□□□□□ -0.39
MUC1-204ENST00000343256 UBE2UQ5VVX9 321 aa12.61□□□□□ -0.39
MUC1-204ENST00000343256 ZNF367Q7RTV3 350 aa12.61□□□□□ -0.39
MUC1-204ENST00000343256 SPATA12Q7Z6I5 190 aa12.61□□□□□ -0.39
MUC1-204ENST00000343256 CENPOQ9BU64 300 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms