RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 MYOD1P15172 320 aa10.4□□□□□ -0.74
SNRNP48-201ENST00000342415 B3GALT5-AS1P59052 145 aa10.4□□□□□ -0.74
SNRNP48-201ENST00000342415 DMRTA1Q5VZB9 504 aa10.4□□□□□ -0.74
SNRNP48-201ENST00000342415 GFRALQ6UXV0 394 aa10.4□□□□□ -0.74
SNRNP48-201ENST00000342415 TMEM45BQ96B21 275 aa10.4□□□□□ -0.74
SNRNP48-201ENST00000342415 PAXXQ9BUH6 204 aa10.4□□□□□ -0.74
SNRNP48-201ENST00000342415 GNB4Q9HAV0 340 aa10.4□□□□□ -0.74
SNRNP48-201ENST00000342415 MPDU1O75352 247 aa10.4□□□□□ -0.74
SNRNP48-201ENST00000342415 GPR6P46095 362 aaPredicted RBP10.4□□□□□ -0.74
SNRNP48-201ENST00000342415 RBPJQ06330 500 aa10.4□□□□□ -0.74
SNRNP48-201ENST00000342415 LRRC10Q5BKY1 277 aa10.4□□□□□ -0.74
SNRNP48-201ENST00000342415 TMEM170AQ8WVE7 144 aa10.4□□□□□ -0.74
SNRNP48-201ENST00000342415 SAP30LQ9HAJ7 183 aa10.4□□□□□ -0.74
SNRNP48-201ENST00000342415 WASHC3Q9Y3C0 194 aa10.4□□□□□ -0.74
SNRNP48-201ENST00000342415 PGPA6NDG6 321 aa10.4□□□□□ -0.75
SNRNP48-201ENST00000342415 K7EQM0 130 aa10.4□□□□□ -0.75
SNRNP48-201ENST00000342415 GNB2P62879 340 aa10.4□□□□□ -0.75
SNRNP48-201ENST00000342415 PAFAH1B2P68402 229 aa10.4□□□□□ -0.75
SNRNP48-201ENST00000342415 ZNF585BQ52M93 769 aa10.4□□□□□ -0.75
SNRNP48-201ENST00000342415 SPATA31B1PQ5VZV4 182 aa10.4□□□□□ -0.75
SNRNP48-201ENST00000342415 SSX8Q7RTT4 187 aa10.4□□□□□ -0.75
SNRNP48-201ENST00000342415 NPIPB3Q92617 1050 aa10.4□□□□□ -0.75
SNRNP48-201ENST00000342415 SPSB4Q96A44 273 aa10.4□□□□□ -0.75
SNRNP48-201ENST00000342415 TRAV3A0A0B4J244 114 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 C9orf172C9J069 976 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 GZMBP10144 247 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 CD82P27701 267 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 ZNF726P1Q15940 193 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 FA2HQ7L5A8 372 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 FDCSPQ8NFU4 85 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 TBL2Q9Y4P3 447 aaKnown RBP10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 IFNL4K9M1U5 179 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 SLC25A17O43808 307 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 IGKV1D-33P01593 117 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 IGKV1-33P01594 117 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 TNFSF10P50591 281 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 RND2P52198 227 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 COL5A1-AS1Q5SY13 56 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 SLC35E4Q6ICL7 350 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 OR2T6Q8NHC8 308 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 DNAH14Q0VDD8 3507 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 LINC00473A8K010 186 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 VENTXO95231 258 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 P01737 135 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 FOXF2Q12947 444 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 TGIF2LYQ8IUE0 185 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 MUC15Q8N387 334 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 FAM216BQ8N7L0 139 aa10.39□□□□□ -0.75
SNRNP48-201ENST00000342415 CFAP54Q96N23 3096 aa10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 NCBP2LA6PVI3 153 aaKnown RBP10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 IL18BPO95998 194 aa10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 OR5AL1P0C617 328 aa10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 GFRA1P56159 465 aa10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 LGALS4P56470 323 aa10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 NHLH1Q02575 133 aa10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 OR1L8Q8NGR8 309 aa10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 AMMECR1Q9Y4X0 333 aaPredicted RBP10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 SELENOKQ9Y6D0 94 aa10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 MOSP00540 346 aa10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 IGKV1-39P01597 117 aa10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 IGKV1D-39P04432 117 aa10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 FAM222BQ8WU58 562 aa10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 ADTRPQ96IZ2 230 aa10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 GAL3ST2Q9H3Q3 398 aa10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 SEBOXQ9HB31 216 aaPredicted RBP10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 SEPSECSQ9HD40 501 aaKnown RBP10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 KIR2DS2P43631 304 aa10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 LINC01551Q86U37 167 aa10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 ZCCHC14Q8WYQ9 949 aaKnown RBP10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 HSPB7Q9UBY9 170 aa10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 KLF2Q9Y5W3 355 aaPredicted RBP10.38□□□□□ -0.75
SNRNP48-201ENST00000342415 MALRD1Q5VYJ5 2156 aa10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 LOC389332A0A1B0GUA5 103 aa10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 M0QZK8 103 aa10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 GGCTO75223 188 aaKnown RBP10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 RPL11P62913 178 aaKnown RBP10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 ZFP36L1Q07352 338 aaKnown RBP10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 OR4A47Q6IF82 309 aa10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 SSBP4Q9BWG4 385 aaPredicted RBP10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 ASCL3Q9NQ33 180 aa10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 RNF115Q9Y4L5 304 aa10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 KIAA1549LQ6ZVL6 1849 aa10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 C2orf16Q68DN1 1984 aa10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 TMEM108Q6UXF1 575 aa10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 RPEQ96AT9 228 aa10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 PGLYRP4Q96LB8 373 aa10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 SNAI2O43623 268 aa10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 LCN2P80188 198 aa10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 PRNTQ86SH4 94 aa10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 NEU1Q99519 415 aa10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 CHRDL1Q9BU40 450 aa10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 SLC25A10Q9UBX3 287 aaPredicted RBP10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 CHD3Q12873 2000 aaKnown RBP10.37□□□□□ -0.75
SNRNP48-201ENST00000342415 TIMP3P35625 211 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 CSN1S1P47710 185 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 ASPHD1Q5U4P2 390 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 WDR82Q6UXN9 313 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 Q6ZT83 130 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 SEMA5BQ9P283 1151 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 ONECUT1Q9UBC0 465 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms