RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 MTORP42345 2549 aa13.92□□□□□ -0.18
CLDN4-201ENST00000340958 TEX50A0A1B0GTY4 177 aa13.92□□□□□ -0.18
CLDN4-201ENST00000340958 JTBO76095 146 aa13.92□□□□□ -0.18
CLDN4-201ENST00000340958 IL6RP08887 468 aaPredicted RBP13.92□□□□□ -0.18
CLDN4-201ENST00000340958 F2RL1P55085 397 aa13.92□□□□□ -0.18
CLDN4-201ENST00000340958 GNB1P62873 340 aa13.92□□□□□ -0.18
CLDN4-201ENST00000340958 HBG1P69891 147 aa13.92□□□□□ -0.18
CLDN4-201ENST00000340958 HBG2P69892 147 aa13.92□□□□□ -0.18
CLDN4-201ENST00000340958 OR8G2PQ6IF36 304 aa13.92□□□□□ -0.18
CLDN4-201ENST00000340958 BRD3OSQ6XYD6 125 aa13.92□□□□□ -0.18
CLDN4-201ENST00000340958 OR5C1Q8NGR4 320 aa13.92□□□□□ -0.18
CLDN4-201ENST00000340958 PCNPQ8WW12 178 aaKnown RBP13.92□□□□□ -0.18
CLDN4-201ENST00000340958 BSCL2Q96G97 398 aaPredicted RBP13.92□□□□□ -0.18
CLDN4-201ENST00000340958 ZNF430Q9H8G1 570 aaPredicted RBP13.92□□□□□ -0.18
CLDN4-201ENST00000340958 IGHV4-31P0DP07 118 aa13.92□□□□□ -0.18
CLDN4-201ENST00000340958 DYNLT3P51808 116 aa13.92□□□□□ -0.18
CLDN4-201ENST00000340958 RPL7L1Q6DKI1 246 aaKnown RBP13.92□□□□□ -0.18
CLDN4-201ENST00000340958 ALKAL2Q6UX46 152 aa13.92□□□□□ -0.18
CLDN4-201ENST00000340958 OR1L8Q8NGR8 309 aa13.92□□□□□ -0.18
CLDN4-201ENST00000340958 EAF1Q96JC9 268 aaPredicted RBP13.92□□□□□ -0.18
CLDN4-201ENST00000340958 J3QLI3 93 aa13.91□□□□□ -0.18
CLDN4-201ENST00000340958 TMEM11P17152 192 aa13.91□□□□□ -0.18
CLDN4-201ENST00000340958 PRCDQ00LT1 54 aa13.91□□□□□ -0.18
CLDN4-201ENST00000340958 HABP2Q14520 560 aaPredicted RBP13.91□□□□□ -0.18
CLDN4-201ENST00000340958 PDLIM3Q53GG5 364 aaPredicted RBP13.91□□□□□ -0.18
CLDN4-201ENST00000340958 SLC25A24Q6NUK1 477 aa13.91□□□□□ -0.18
CLDN4-201ENST00000340958 MMD2Q8IY49 270 aa13.91□□□□□ -0.18
CLDN4-201ENST00000340958 LILRB2Q8N423 598 aa13.91□□□□□ -0.18
CLDN4-201ENST00000340958 FBXL15Q9H469 300 aa13.91□□□□□ -0.18
CLDN4-201ENST00000340958 CYTL1Q9NRR1 136 aa13.91□□□□□ -0.18
CLDN4-201ENST00000340958 TPSG1Q9NRR2 321 aa13.91□□□□□ -0.18
CLDN4-201ENST00000340958 SIGLEC9Q9Y336 463 aa13.91□□□□□ -0.18
CLDN4-201ENST00000340958 NCBP2LA6PVI3 153 aaKnown RBP13.9□□□□□ -0.18
CLDN4-201ENST00000340958 NBR2O15453 112 aa13.9□□□□□ -0.18
CLDN4-201ENST00000340958 OR8U8P0C7N1 319 aa13.9□□□□□ -0.18
CLDN4-201ENST00000340958 IGHV4-38-2P0DP08 117 aa13.9□□□□□ -0.18
CLDN4-201ENST00000340958 ZNF266Q14584 549 aa13.9□□□□□ -0.18
CLDN4-201ENST00000340958 TNXAQ16473 311 aa13.9□□□□□ -0.18
CLDN4-201ENST00000340958 PPP1R27Q86WC6 154 aa13.9□□□□□ -0.18
CLDN4-201ENST00000340958 BAP18Q8IXM2 172 aa13.9□□□□□ -0.18
CLDN4-201ENST00000340958 MED9Q9NWA0 146 aa13.9□□□□□ -0.18
CLDN4-201ENST00000340958 SMAD7O15105 426 aaKnown RBP13.9□□□□□ -0.18
CLDN4-201ENST00000340958 RAB11AP62491 216 aa13.9□□□□□ -0.18
CLDN4-201ENST00000340958 PJVKQ0ZLH3 352 aa13.9□□□□□ -0.18
CLDN4-201ENST00000340958 PRSS8Q16651 343 aa13.9□□□□□ -0.18
CLDN4-201ENST00000340958 CYB5R2Q6BCY4 276 aa13.9□□□□□ -0.18
CLDN4-201ENST00000340958 OR4C12Q96R67 309 aa13.9□□□□□ -0.18
CLDN4-201ENST00000340958 TLN2Q9Y4G6 2542 aa13.89□□□□□ -0.19
CLDN4-201ENST00000340958 ABCA2Q9BZC7 2435 aa13.89□□□□□ -0.19
CLDN4-201ENST00000340958 RRHO14718 337 aa13.89□□□□□ -0.19
CLDN4-201ENST00000340958 DFFBO76075 338 aa13.89□□□□□ -0.19
CLDN4-201ENST00000340958 SNCAP37840 140 aa13.89□□□□□ -0.19
CLDN4-201ENST00000340958 VDAC2P45880 294 aaPredicted RBP13.89□□□□□ -0.19
CLDN4-201ENST00000340958 SMUG1Q53HV7 270 aa13.89□□□□□ -0.19
CLDN4-201ENST00000340958 TMEM14EPQ6UXP3 125 aa13.89□□□□□ -0.19
CLDN4-201ENST00000340958 OR10P1Q8NGE3 313 aa13.89□□□□□ -0.19
CLDN4-201ENST00000340958 STOML3Q8TAV4 291 aa13.89□□□□□ -0.19
CLDN4-201ENST00000340958 ATP5SQ99766 215 aa13.89□□□□□ -0.19
CLDN4-201ENST00000340958 A0A1W2PN81 502 aa13.88□□□□□ -0.19
CLDN4-201ENST00000340958 SCO1O75880 301 aa13.88□□□□□ -0.19
CLDN4-201ENST00000340958 CNIH1O95406 144 aa13.88□□□□□ -0.19
CLDN4-201ENST00000340958 IFNA4P05014 189 aa13.88□□□□□ -0.19
CLDN4-201ENST00000340958 CHRNA7P36544 502 aa13.88□□□□□ -0.19
CLDN4-201ENST00000340958 ERHP84090 104 aaKnown RBP13.88□□□□□ -0.19
CLDN4-201ENST00000340958 EIF5AL1Q6IS14 154 aaKnown RBP13.88□□□□□ -0.19
CLDN4-201ENST00000340958 MRPL41Q8IXM3 137 aaKnown RBP13.88□□□□□ -0.19
CLDN4-201ENST00000340958 SLC24A4Q8NFF2 622 aa13.88□□□□□ -0.19
CLDN4-201ENST00000340958 SMR3AQ99954 134 aa13.88□□□□□ -0.19
CLDN4-201ENST00000340958 WFDC1Q9HC57 220 aa13.88□□□□□ -0.19
CLDN4-201ENST00000340958 A0A0U1RQK1 487 aa13.87□□□□□ -0.19
CLDN4-201ENST00000340958 IFNA5P01569 189 aa13.87□□□□□ -0.19
CLDN4-201ENST00000340958 FOSL1P15407 271 aa13.87□□□□□ -0.19
CLDN4-201ENST00000340958 MAS1LP35410 378 aa13.87□□□□□ -0.19
CLDN4-201ENST00000340958 SLC38A11Q08AI6 406 aa13.87□□□□□ -0.19
CLDN4-201ENST00000340958 FAM120AOSQ5T036 256 aa13.87□□□□□ -0.19
CLDN4-201ENST00000340958 SCARB1Q8WTV0 552 aa13.87□□□□□ -0.19
CLDN4-201ENST00000340958 PINX1Q96BK5 328 aaKnown RBP13.87□□□□□ -0.19
CLDN4-201ENST00000340958 PHYHIPLQ96FC7 376 aa13.87□□□□□ -0.19
CLDN4-201ENST00000340958 AJUBAQ96IF1 538 aa13.87□□□□□ -0.19
CLDN4-201ENST00000340958 NDUFA4L2Q9NRX3 87 aa13.87□□□□□ -0.19
CLDN4-201ENST00000340958 C1RLQ9NZP8 487 aa13.87□□□□□ -0.19
CLDN4-201ENST00000340958 CSPG4Q6UVK1 2322 aa13.87□□□□□ -0.19
CLDN4-201ENST00000340958 SCAF4O95104 1147 aaKnown RBP13.87□□□□□ -0.19
CLDN4-201ENST00000340958 AVPP01185 164 aa13.87□□□□□ -0.19
CLDN4-201ENST00000340958 CRYGBP07316 175 aa13.87□□□□□ -0.19
CLDN4-201ENST00000340958 NPY1RP25929 384 aa13.87□□□□□ -0.19
CLDN4-201ENST00000340958 RPL27AP46776 148 aaKnown RBP13.87□□□□□ -0.19
CLDN4-201ENST00000340958 C10orf55Q5SWW7 151 aa13.87□□□□□ -0.19
CLDN4-201ENST00000340958 UBAC2Q8NBM4 344 aa13.87□□□□□ -0.19
CLDN4-201ENST00000340958 NPBQ8NG41 125 aa13.87□□□□□ -0.19
CLDN4-201ENST00000340958 MFSD2BA6NFX1 497 aa13.86□□□□□ -0.19
CLDN4-201ENST00000340958 FBXO24O75426 580 aa13.86□□□□□ -0.19
CLDN4-201ENST00000340958 ETV3LQ6ZN32 361 aa13.86□□□□□ -0.19
CLDN4-201ENST00000340958 THNSL2Q86YJ6 484 aa13.86□□□□□ -0.19
CLDN4-201ENST00000340958 HSD17B11Q8NBQ5 300 aa13.86□□□□□ -0.19
CLDN4-201ENST00000340958 OR10W1Q8NGF6 305 aa13.86□□□□□ -0.19
CLDN4-201ENST00000340958 SCGB1C1Q8TD33 95 aa13.86□□□□□ -0.19
CLDN4-201ENST00000340958 GSX1Q9H4S2 264 aaPredicted RBP13.86□□□□□ -0.19
CLDN4-201ENST00000340958 C15orf62A8K5M9 175 aa13.85□□□□□ -0.19
CLDN4-201ENST00000340958 CA2P00918 260 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms