RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 TMUB1Q9BVT8 246 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 TMEM160Q9NX00 188 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 C1RLQ9NZP8 487 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 SONP18583 2426 aaKnown RBP6.22□□□□□ -1.41
TMC1-202ENST00000340019 FAM24AA6NFZ4 105 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 NCBP2LA6PVI3 153 aaKnown RBP6.22□□□□□ -1.41
TMC1-202ENST00000340019 H3BUX3 64 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 L7N2F9 121 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 GPR137BO60478 399 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 LY86O95711 162 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 CA2P00918 260 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 RPL12P30050 165 aaKnown RBP6.22□□□□□ -1.41
TMC1-202ENST00000340019 RPL23AP62750 156 aaKnown RBP6.22□□□□□ -1.41
TMC1-202ENST00000340019 VAMP2P63027 116 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 Q6YL49 198 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 TMEM252Q8N6L7 170 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 CLCC1Q96S66 551 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 YAE1D1Q9NRH1 226 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 PSENENQ9NZ42 101 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 A0A0D9SG52 128 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 IGSF23A1L1A6 192 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 H3BP45 60 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 AMY1AP04745 511 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 IER3P46695 156 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 CAV2P51636 162 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 AP2S1P53680 142 aaPredicted RBP6.22□□□□□ -1.41
TMC1-202ENST00000340019 PLGLAQ15195 96 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 TNXAQ16473 311 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 TMEM14EPQ6UXP3 125 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 IL17RELQ6ZVW7 336 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 TMUB2Q71RG4 321 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 C5orf56Q8N8D9 126 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 OR10W1Q8NGF6 305 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 SLC25A33Q9BSK2 321 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 PLEKHA3Q9HB20 300 aa6.22□□□□□ -1.41
TMC1-202ENST00000340019 SETXQ7Z333 2677 aaKnown RBP6.21□□□□□ -1.42
TMC1-202ENST00000340019 HLA-DRB1P01911 266 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 S100A11P31949 105 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 HOXA1P49639 335 aaPredicted RBP6.21□□□□□ -1.42
TMC1-202ENST00000340019 EWSR1Q01844 656 aaKnown RBP eCLIP6.21□□□□□ -1.42
TMC1-202ENST00000340019 BSXQ3C1V8 233 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 ZNF562Q6V9R5 426 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 TMEM219Q86XT9 240 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 TMEM170AQ8WVE7 144 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 OR4C12Q96R67 309 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 HIPK2Q9H2X6 1198 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 LOC105371267A0A1B0GV96 52 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 IGLC7A0M8Q6 106 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 C15orf62A8K5M9 175 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 PMS2P5A8MQ11 134 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 TEX22C9J3V5 150 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 FGF16O43320 207 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 ACTL6BO94805 426 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 LY6G6DO95868 133 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 IGHV4-59P01825 116 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 NUP62P37198 522 aaPredicted RBP6.21□□□□□ -1.42
TMC1-202ENST00000340019 RPL27AP46776 148 aaKnown RBP6.21□□□□□ -1.42
TMC1-202ENST00000340019 NHLH2Q02577 135 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 WT1-ASQ06250 92 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 SPANXN5Q5MJ07 72 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 SUN5Q8TC36 379 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 SRSF12Q8WXF0 261 aaKnown RBP6.21□□□□□ -1.42
TMC1-202ENST00000340019 SLC25A31Q9H0C2 315 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 MOB4Q9Y3A3 225 aa6.21□□□□□ -1.42
TMC1-202ENST00000340019 HIVEP1P15822 2718 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 IGHV7-81A0A0B4J1V7 117 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 A0A1W2PN81 502 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 CHRNA7P36544 502 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 GNB1P62873 340 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 CX3CL1P78423 397 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 NDPQ00604 133 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 BAXQ07812 192 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 LY6EQ16553 131 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 CLEC9AQ6UXN8 241 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 C16orf82Q7Z2V1 217 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 STPG2Q8N412 459 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 OR5R1Q8NH85 324 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 BSCL2Q96G97 398 aaPredicted RBP6.2□□□□□ -1.42
TMC1-202ENST00000340019 SRSF8Q9BRL6 282 aaKnown RBP6.2□□□□□ -1.42
TMC1-202ENST00000340019 HINT2Q9BX68 163 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 ARL6Q9H0F7 186 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 HEYLQ9NQ87 328 aaPredicted RBP6.2□□□□□ -1.42
TMC1-202ENST00000340019 PITPNC1Q9UKF7 332 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 U3KQ87 197 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 SULT1A1P50225 295 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 FXYD3Q14802 87 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 OPCMLQ14982 345 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 NDUFA5Q16718 116 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 HAPLN4Q86UW8 402 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 SLC24A4Q8NFF2 622 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 RASL11BQ9BPW5 248 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 HSPB9Q9BQS6 159 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 ENY2Q9NPA8 101 aa6.2□□□□□ -1.42
TMC1-202ENST00000340019 STRAPQ9Y3F4 350 aaKnown RBP6.2□□□□□ -1.42
TMC1-202ENST00000340019 BCL2L11O43521 198 aa6.19□□□□□ -1.42
TMC1-202ENST00000340019 CST7O76096 145 aa6.19□□□□□ -1.42
TMC1-202ENST00000340019 METTL15P1P0C7V9 234 aa6.19□□□□□ -1.42
TMC1-202ENST00000340019 CD99P14209 185 aa6.19□□□□□ -1.42
TMC1-202ENST00000340019 ARL16Q0P5N6 197 aa6.19□□□□□ -1.42
TMC1-202ENST00000340019 TMEM267Q0VDI3 215 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms