RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 MIC13Q5XKP0 118 aa13.15□□□□□ -0.31
SCNN1A-202ENST00000338748 OR4C13Q8NGP0 309 aa13.15□□□□□ -0.31
SCNN1A-202ENST00000338748 PATZ1Q9HBE1 687 aaKnown RBP13.15□□□□□ -0.31
SCNN1A-202ENST00000338748 PPIAL4CA0A0B4J2A2 164 aa13.14□□□□□ -0.31
SCNN1A-202ENST00000338748 A0A1W2PPE2 198 aa13.14□□□□□ -0.31
SCNN1A-202ENST00000338748 COLCA2A8K830 154 aa13.14□□□□□ -0.31
SCNN1A-202ENST00000338748 C17orf112F2Z3M2 114 aa13.14□□□□□ -0.31
SCNN1A-202ENST00000338748 PPIAL4GP0DN37 164 aa13.14□□□□□ -0.31
SCNN1A-202ENST00000338748 PDPNQ86YL7 162 aa13.14□□□□□ -0.31
SCNN1A-202ENST00000338748 SSMEM1Q8WWF3 244 aa13.14□□□□□ -0.31
SCNN1A-202ENST00000338748 SMCO4Q9NRQ5 59 aa13.14□□□□□ -0.31
SCNN1A-202ENST00000338748 WASHC3Q9Y3C0 194 aa13.14□□□□□ -0.31
SCNN1A-202ENST00000338748 ZFHX3Q15911 3703 aa13.14□□□□□ -0.31
SCNN1A-202ENST00000338748 CGB1A6NKQ9 187 aa13.13□□□□□ -0.31
SCNN1A-202ENST00000338748 C19orf84I3L1E1 186 aa13.13□□□□□ -0.31
SCNN1A-202ENST00000338748 NDUFS7O75251 213 aa13.13□□□□□ -0.31
SCNN1A-202ENST00000338748 MBP02144 154 aa13.13□□□□□ -0.31
SCNN1A-202ENST00000338748 COX7A1P24310 79 aa13.13□□□□□ -0.31
SCNN1A-202ENST00000338748 RPL8P62917 257 aaKnown RBP13.13□□□□□ -0.31
SCNN1A-202ENST00000338748 NDUFA4L2Q9NRX3 87 aa13.13□□□□□ -0.31
SCNN1A-202ENST00000338748 TSPAN9O75954 239 aa13.13□□□□□ -0.31
SCNN1A-202ENST00000338748 CD81P60033 236 aa13.13□□□□□ -0.31
SCNN1A-202ENST00000338748 HLA-DRB5Q30154 266 aa13.13□□□□□ -0.31
SCNN1A-202ENST00000338748 OR8B3Q8NGG8 313 aa13.13□□□□□ -0.31
SCNN1A-202ENST00000338748 OR5B3Q8NH48 314 aa13.13□□□□□ -0.31
SCNN1A-202ENST00000338748 OR8B2Q96RD0 313 aa13.13□□□□□ -0.31
SCNN1A-202ENST00000338748 ACTR3CQ9C0K3 210 aaPredicted RBP13.13□□□□□ -0.31
SCNN1A-202ENST00000338748 PRELID1Q9Y255 219 aa13.13□□□□□ -0.31
SCNN1A-202ENST00000338748 PXMP4Q9Y6I8 212 aa13.13□□□□□ -0.31
SCNN1A-202ENST00000338748 ZFYVE26Q68DK2 2539 aa13.13□□□□□ -0.31
SCNN1A-202ENST00000338748 SLC25A17O43808 307 aa13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 CDKN1AP38936 164 aa13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 CDC34P49427 236 aaPredicted RBP13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 MLANAQ16655 118 aa13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 MRGPRG-AS1Q2M3A8 158 aa13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 BSXQ3C1V8 233 aa13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 LDLRAD2Q5SZI1 272 aa13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 IQCF2Q8IXL9 164 aa13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 ZNF430Q9H8G1 570 aaPredicted RBP13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 VAX2Q9UIW0 290 aa13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 MPDU1O75352 247 aa13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 RNASE2P10153 161 aaKnown RBP13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 CNTFRP26992 372 aa13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 OPRK1P41145 380 aa13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 RHEBQ15382 184 aa13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 ACOT6Q3I5F7 207 aaPredicted RBP13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 DTX2Q86UW9 622 aa13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 C8orf46Q8TAG6 207 aa13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 TMEM167AQ8TBQ9 72 aa13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 NEIL1Q96FI4 390 aaPredicted RBP13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 PCGF1Q9BSM1 259 aa13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 UNKLQ9H9P5 680 aaKnown RBP13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 NPVFQ9HCQ7 196 aa13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 ONECUT1Q9UBC0 465 aa13.12□□□□□ -0.31
SCNN1A-202ENST00000338748 IGKV1OR2-108A0A075B7D4 117 aa13.11□□□□□ -0.31
SCNN1A-202ENST00000338748 A0A1W2PPH5 198 aa13.11□□□□□ -0.31
SCNN1A-202ENST00000338748 IGFBP2P18065 325 aa13.11□□□□□ -0.31
SCNN1A-202ENST00000338748 C4orf17Q53FE4 359 aa13.11□□□□□ -0.31
SCNN1A-202ENST00000338748 OR4P4Q8NGL7 312 aa13.11□□□□□ -0.31
SCNN1A-202ENST00000338748 CLEC7AQ9BXN2 247 aa13.11□□□□□ -0.31
SCNN1A-202ENST00000338748 COMMD5Q9GZQ3 224 aa13.11□□□□□ -0.31
SCNN1A-202ENST00000338748 USP24Q9UPU5 2620 aa13.11□□□□□ -0.31
SCNN1A-202ENST00000338748 SEC14L6B5MCN3 397 aa13.11□□□□□ -0.31
SCNN1A-202ENST00000338748 BUB1B-PAK6H3BSN5 160 aa13.11□□□□□ -0.31
SCNN1A-202ENST00000338748 ENSAO43768 121 aaKnown RBP13.11□□□□□ -0.31
SCNN1A-202ENST00000338748 CRYBA1P05813 215 aa13.11□□□□□ -0.31
SCNN1A-202ENST00000338748 USF1P22415 310 aaPredicted RBP13.11□□□□□ -0.31
SCNN1A-202ENST00000338748 WT1-ASQ06250 92 aa13.11□□□□□ -0.31
SCNN1A-202ENST00000338748 LY6G5BQ8NDX9 201 aa13.11□□□□□ -0.31
SCNN1A-202ENST00000338748 IGFBPL1Q8WX77 278 aa13.11□□□□□ -0.31
SCNN1A-202ENST00000338748 FKBP11Q9NYL4 201 aa13.11□□□□□ -0.31
SCNN1A-202ENST00000338748 MIOXQ9UGB7 285 aa13.11□□□□□ -0.31
SCNN1A-202ENST00000338748 WNK2Q9Y3S1 2297 aa13.1□□□□□ -0.31
SCNN1A-202ENST00000338748 USP9XQ93008 2570 aaPredicted RBP13.1□□□□□ -0.31
SCNN1A-202ENST00000338748 ZNF727A8MUV8 499 aa13.1□□□□□ -0.31
SCNN1A-202ENST00000338748 CYB5BO43169 146 aa13.1□□□□□ -0.31
SCNN1A-202ENST00000338748 RAB13P51153 203 aa13.1□□□□□ -0.31
SCNN1A-202ENST00000338748 MEF2BQ02080 365 aaPredicted RBP13.1□□□□□ -0.31
SCNN1A-202ENST00000338748 PMS2P11Q13670 270 aa13.1□□□□□ -0.31
SCNN1A-202ENST00000338748 TEPPQ6URK8 271 aa13.1□□□□□ -0.31
SCNN1A-202ENST00000338748 HIST1H2BAQ96A08 127 aa13.1□□□□□ -0.31
SCNN1A-202ENST00000338748 NIPSNAP3BQ9BS92 247 aa13.1□□□□□ -0.31
SCNN1A-202ENST00000338748 MLXQ9UH92 298 aa13.1□□□□□ -0.31
SCNN1A-202ENST00000338748 FLI1Q01543 452 aaPredicted RBP13.09□□□□□ -0.31
SCNN1A-202ENST00000338748 C2orf83Q53S99 150 aa13.09□□□□□ -0.31
SCNN1A-202ENST00000338748 PNKDQ8N490 385 aa13.09□□□□□ -0.31
SCNN1A-202ENST00000338748 STPG3Q8N7X2 389 aa13.09□□□□□ -0.31
SCNN1A-202ENST00000338748 OR1L8Q8NGR8 309 aa13.09□□□□□ -0.31
SCNN1A-202ENST00000338748 RAB1CQ92928 201 aa13.09□□□□□ -0.31
SCNN1A-202ENST00000338748 TNFRSF14Q92956 283 aa13.09□□□□□ -0.31
SCNN1A-202ENST00000338748 SAV1Q9H4B6 383 aaPredicted RBP13.09□□□□□ -0.31
SCNN1A-202ENST00000338748 SIRT7Q9NRC8 400 aa13.09□□□□□ -0.31
SCNN1A-202ENST00000338748 IFNA1P01562 189 aa13.09□□□□□ -0.31
SCNN1A-202ENST00000338748 PAX6P26367 422 aa13.09□□□□□ -0.31
SCNN1A-202ENST00000338748 IL3RAP26951 378 aa13.09□□□□□ -0.31
SCNN1A-202ENST00000338748 B2MP61769 119 aa13.09□□□□□ -0.31
SCNN1A-202ENST00000338748 SPATA31B1PQ5VZV4 182 aa13.09□□□□□ -0.31
SCNN1A-202ENST00000338748 UBTD1Q9HAC8 227 aa13.09□□□□□ -0.31
SCNN1A-202ENST00000338748 CRYBG3Q68DQ2 2970 aa13.09□□□□□ -0.31
SCNN1A-202ENST00000338748 CELSR1Q9NYQ6 3014 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms