RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 HINT2Q9BX68 163 aa14.34□□□□□ -0.11
RAB39A-201ENST00000320578 SIGLEC9Q9Y336 463 aa14.34□□□□□ -0.11
RAB39A-201ENST00000320578 UBR5O95071 2799 aaPredicted RBP14.34□□□□□ -0.11
RAB39A-201ENST00000320578 MYO18BQ8IUG5 2567 aa14.34□□□□□ -0.11
RAB39A-201ENST00000320578 TIMM23O14925 209 aa14.34□□□□□ -0.11
RAB39A-201ENST00000320578 VENTXO95231 258 aa14.34□□□□□ -0.11
RAB39A-201ENST00000320578 H2AFB1P0C5Y9 115 aa14.34□□□□□ -0.11
RAB39A-201ENST00000320578 KLRD1Q13241 179 aa14.34□□□□□ -0.11
RAB39A-201ENST00000320578 TMEM41BQ5BJD5 291 aa14.34□□□□□ -0.11
RAB39A-201ENST00000320578 ZNF709Q8N972 641 aa14.34□□□□□ -0.11
RAB39A-201ENST00000320578 MBD3L1Q8WWY6 194 aa14.34□□□□□ -0.11
RAB39A-201ENST00000320578 RBMXL1Q96E39 390 aaKnown RBP14.34□□□□□ -0.11
RAB39A-201ENST00000320578 NPCDR1Q9BY65 106 aa14.34□□□□□ -0.11
RAB39A-201ENST00000320578 NPVFQ9HCQ7 196 aa14.34□□□□□ -0.11
RAB39A-201ENST00000320578 SPTAN1Q13813 2472 aaKnown RBP14.33□□□□□ -0.11
RAB39A-201ENST00000320578 TET2Q6N021 2002 aaPredicted RBP14.33□□□□□ -0.12
RAB39A-201ENST00000320578 TMEM218A2RU14 115 aa14.33□□□□□ -0.12
RAB39A-201ENST00000320578 RNASE2P10153 161 aaKnown RBP14.33□□□□□ -0.12
RAB39A-201ENST00000320578 RAB2AP61019 212 aa14.33□□□□□ -0.12
RAB39A-201ENST00000320578 CCDC28AQ8IWP9 274 aa14.33□□□□□ -0.12
RAB39A-201ENST00000320578 TBX15Q96SF7 602 aa14.33□□□□□ -0.12
RAB39A-201ENST00000320578 SMDT1Q9H4I9 107 aa14.33□□□□□ -0.12
RAB39A-201ENST00000320578 LPAR2Q9HBW0 351 aa14.33□□□□□ -0.12
RAB39A-201ENST00000320578 RPRMQ9NS64 109 aa14.33□□□□□ -0.12
RAB39A-201ENST00000320578 DCHS2Q6V1P9 2916 aa14.33□□□□□ -0.12
RAB39A-201ENST00000320578 CGB1A6NKQ9 187 aa14.32□□□□□ -0.12
RAB39A-201ENST00000320578 LGALS4P56470 323 aa14.32□□□□□ -0.12
RAB39A-201ENST00000320578 PAX8Q06710 450 aa14.32□□□□□ -0.12
RAB39A-201ENST00000320578 SPSB3Q6PJ21 355 aa14.32□□□□□ -0.12
RAB39A-201ENST00000320578 NPBQ8NG41 125 aa14.32□□□□□ -0.12
RAB39A-201ENST00000320578 SUB1P53999 127 aaKnown RBP eCLIP14.31□□□□□ -0.12
RAB39A-201ENST00000320578 EBI3Q14213 229 aa14.31□□□□□ -0.12
RAB39A-201ENST00000320578 TUSC1Q2TAM9 212 aa14.31□□□□□ -0.12
RAB39A-201ENST00000320578 TREML4Q6UXN2 200 aa14.31□□□□□ -0.12
RAB39A-201ENST00000320578 LHFPL4Q7Z7J7 247 aa14.31□□□□□ -0.12
RAB39A-201ENST00000320578 PPP1R27Q86WC6 154 aa14.31□□□□□ -0.12
RAB39A-201ENST00000320578 CACNG8Q8WXS5 425 aa14.31□□□□□ -0.12
RAB39A-201ENST00000320578 MALSU1Q96EH3 234 aa14.31□□□□□ -0.12
RAB39A-201ENST00000320578 SRSF8Q9BRL6 282 aaKnown RBP14.31□□□□□ -0.12
RAB39A-201ENST00000320578 PBDC1Q9BVG4 233 aa14.31□□□□□ -0.12
RAB39A-201ENST00000320578 SCRT1Q9BWW7 348 aa14.31□□□□□ -0.12
RAB39A-201ENST00000320578 KCNIP2Q9NS61 270 aa14.31□□□□□ -0.12
RAB39A-201ENST00000320578 LSM4Q9Y4Z0 139 aaKnown RBP14.31□□□□□ -0.12
RAB39A-201ENST00000320578 IGHV4-61A0A0C4DH41 118 aa14.31□□□□□ -0.12
RAB39A-201ENST00000320578 FAM157AC9JC47 383 aa14.31□□□□□ -0.12
RAB39A-201ENST00000320578 MOSP00540 346 aa14.31□□□□□ -0.12
RAB39A-201ENST00000320578 OPN1MWP04001 364 aa14.31□□□□□ -0.12
RAB39A-201ENST00000320578 OPN1MW2P0DN77 364 aa14.31□□□□□ -0.12
RAB39A-201ENST00000320578 OPN1MW3P0DN78 364 aa14.31□□□□□ -0.12
RAB39A-201ENST00000320578 GPX4P36969 197 aaPredicted RBP14.31□□□□□ -0.12
RAB39A-201ENST00000320578 PVRIGQ6DKI7 326 aa14.31□□□□□ -0.12
RAB39A-201ENST00000320578 RNASEH2CQ8TDP1 164 aaKnown RBP14.31□□□□□ -0.12
RAB39A-201ENST00000320578 KIAA1456Q9P272 454 aa14.31□□□□□ -0.12
RAB39A-201ENST00000320578 METTL1Q9UBP6 276 aaKnown RBP14.31□□□□□ -0.12
RAB39A-201ENST00000320578 NDUFA3O95167 84 aa14.3□□□□□ -0.12
RAB39A-201ENST00000320578 OPRK1P41145 380 aa14.3□□□□□ -0.12
RAB39A-201ENST00000320578 COMPP49747 757 aaPredicted RBP14.3□□□□□ -0.12
RAB39A-201ENST00000320578 PMS2P11Q13670 270 aa14.3□□□□□ -0.12
RAB39A-201ENST00000320578 PEA15Q15121 130 aa14.3□□□□□ -0.12
RAB39A-201ENST00000320578 C10orf91Q5T1B1 145 aa14.3□□□□□ -0.12
RAB39A-201ENST00000320578 ZNF114Q8NC26 417 aa14.3□□□□□ -0.12
RAB39A-201ENST00000320578 TPSG1Q9NRR2 321 aa14.3□□□□□ -0.12
RAB39A-201ENST00000320578 HILPDAQ9Y5L2 63 aa14.3□□□□□ -0.12
RAB39A-201ENST00000320578 E7EUB6 86 aa14.29□□□□□ -0.12
RAB39A-201ENST00000320578 ACTL6BO94805 426 aa14.29□□□□□ -0.12
RAB39A-201ENST00000320578 RPL27AP46776 148 aaKnown RBP14.29□□□□□ -0.12
RAB39A-201ENST00000320578 SRSF3P84103 164 aaKnown RBP14.29□□□□□ -0.12
RAB39A-201ENST00000320578 ARSJQ5FYB0 599 aaPredicted RBP14.29□□□□□ -0.12
RAB39A-201ENST00000320578 OR10W1Q8NGF6 305 aa14.29□□□□□ -0.12
RAB39A-201ENST00000320578 OR2T10Q8NGZ9 312 aa14.29□□□□□ -0.12
RAB39A-201ENST00000320578 TREM1Q9NP99 234 aa14.29□□□□□ -0.12
RAB39A-201ENST00000320578 SLC25A16P16260 332 aa14.29□□□□□ -0.12
RAB39A-201ENST00000320578 CNTFRP26992 372 aa14.29□□□□□ -0.12
RAB39A-201ENST00000320578 WT1-ASQ06250 92 aa14.29□□□□□ -0.12
RAB39A-201ENST00000320578 GUK1Q16774 197 aa14.29□□□□□ -0.12
RAB39A-201ENST00000320578 SFT2D1Q8WV19 159 aa14.29□□□□□ -0.12
RAB39A-201ENST00000320578 TNCP24821 2201 aa14.28□□□□□ -0.12
RAB39A-201ENST00000320578 IGHV4-30-2A0A087WSY4 118 aa14.28□□□□□ -0.12
RAB39A-201ENST00000320578 AGPAT2O15120 278 aa14.28□□□□□ -0.12
RAB39A-201ENST00000320578 NBR2O15453 112 aa14.28□□□□□ -0.12
RAB39A-201ENST00000320578 SNRNP70P08621 437 aaKnown RBP14.28□□□□□ -0.12
RAB39A-201ENST00000320578 RAB31Q13636 194 aa14.28□□□□□ -0.12
RAB39A-201ENST00000320578 ACOT6Q3I5F7 207 aaPredicted RBP14.28□□□□□ -0.12
RAB39A-201ENST00000320578 ACSM6Q6P461 480 aa14.28□□□□□ -0.12
RAB39A-201ENST00000320578 TEPPQ6URK8 271 aa14.28□□□□□ -0.12
RAB39A-201ENST00000320578 TMEM144Q7Z5S9 345 aa14.28□□□□□ -0.12
RAB39A-201ENST00000320578 C1orf159Q96HA4 380 aa14.28□□□□□ -0.12
RAB39A-201ENST00000320578 RCC1LQ96I51 464 aaKnown RBP14.28□□□□□ -0.12
RAB39A-201ENST00000320578 EAF1Q96JC9 268 aaPredicted RBP14.28□□□□□ -0.12
RAB39A-201ENST00000320578 SEC11CQ9BY50 192 aa14.28□□□□□ -0.12
RAB39A-201ENST00000320578 VSIRQ9H7M9 311 aa14.28□□□□□ -0.12
RAB39A-201ENST00000320578 CARHSP1Q9Y2V2 147 aaKnown RBP14.28□□□□□ -0.12
RAB39A-201ENST00000320578 ARHGAP32A7KAX9 2087 aa14.28□□□□□ -0.12
RAB39A-201ENST00000320578 IGLC7A0M8Q6 106 aa14.27□□□□□ -0.12
RAB39A-201ENST00000320578 A1L4Q6 167 aa14.27□□□□□ -0.12
RAB39A-201ENST00000320578 SMCO3A2RU48 225 aa14.27□□□□□ -0.12
RAB39A-201ENST00000320578 TSPAN9O75954 239 aa14.27□□□□□ -0.12
RAB39A-201ENST00000320578 IGKV1D-33P01593 117 aa14.27□□□□□ -0.12
RAB39A-201ENST00000320578 IGKV1-33P01594 117 aa14.27□□□□□ -0.12
RAB39A-201ENST00000320578 M6PRP20645 277 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms