RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 PLPPR1Q8TBJ4 325 aa6.34□□□□□ -1.4
CDHR3-201ENST00000317716 CORO2AQ92828 525 aa6.34□□□□□ -1.4
CDHR3-201ENST00000317716 MS4A5Q9H3V2 200 aa6.34□□□□□ -1.4
CDHR3-201ENST00000317716 IL36BQ9NZH7 164 aa6.34□□□□□ -1.4
CDHR3-201ENST00000317716 CEACAM18A8MTB9 384 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 J3QT63 122 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 SYNGR3O43761 229 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 SMPD2O60906 423 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 OR2J3O76001 311 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 C3orf79P0CE67 100 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 CA7P43166 264 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 MAGEA5P43359 124 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 MPV17L2Q567V2 206 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 SLC25A34Q6PIV7 304 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 NIT1Q86X76 327 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 OR1B1Q8NGR6 318 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 MBD3L1Q8WWY6 194 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 MEGF9Q9H1U4 602 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 HIF1ANQ9NWT6 349 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 IL19Q9UHD0 177 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 ZGRF1Q86YA3 2104 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 hDV102S1A0JD36 115 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 SH2D7A6NKC9 451 aaPredicted RBP6.33□□□□□ -1.4
CDHR3-201ENST00000317716 MAS1LP35410 378 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 OR1C1Q15619 314 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 RPL39P5Q59GN2 51 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 MIR17HGQ75NE6 70 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 DTX1Q86Y01 620 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 SLC25A40Q8TBP6 338 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 RBFOX2O43251 390 aaKnown RBP eCLIP6.33□□□□□ -1.4
CDHR3-201ENST00000317716 VENTXO95231 258 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 IGFBP2P18065 325 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 CD24P25063 80 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 PLP1P60201 277 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 KCNMB1Q16558 191 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 MOB1BQ7L9L4 216 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 MDP1Q86V88 176 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 HES4Q9HCC6 221 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 ELOVL5Q9NYP7 299 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 PLXNA2O75051 1894 aa6.33□□□□□ -1.4
CDHR3-201ENST00000317716 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.32□□□□□ -1.42e-6■■■■■ 30.5
CDHR3-201ENST00000317716 LAMA5O15230 3695 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 GNG7O60262 68 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 CLDN14O95500 239 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 KLF3P57682 345 aaPredicted RBP6.32□□□□□ -1.4
CDHR3-201ENST00000317716 TPTE2P1Q5T6R2 138 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 LYPD6BQ8NI32 183 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 POM121L2Q96KW2 1035 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 SCNM1Q9BWG6 230 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 MAP1LC3CQ9BXW4 147 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 NPVFQ9HCQ7 196 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 TMEM242Q9NWH2 141 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 IGKV1-6A0A0C4DH72 117 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 A0A1B0GW64 132 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 ISLRO14498 428 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 FOXH1O75593 365 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 CA2P00918 260 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 FRMD6-AS1P0C7T7 363 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 LINC00614P0C842 121 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 CCL1P22362 96 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 COL8A1P27658 744 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 RELQ04864 619 aaPredicted RBP6.32□□□□□ -1.4
CDHR3-201ENST00000317716 ARL6IP6Q8N6S5 226 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 OR5P3Q8WZ94 311 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 C12orf77C9JDV5 145 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 ZNF324O75467 553 aaPredicted RBP6.32□□□□□ -1.4
CDHR3-201ENST00000317716 HLA-DQA1P01909 254 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 SRD5A2P31213 254 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 ZNF138P52744 262 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 RPL30P62888 115 aaKnown RBP6.32□□□□□ -1.4
CDHR3-201ENST00000317716 SRSF6Q13247 344 aaKnown RBP6.32□□□□□ -1.4
CDHR3-201ENST00000317716 SMIM21Q3B7S5 101 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 TCF24Q7RTU0 167 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 KCNE4Q8WWG9 221 aa6.32□□□□□ -1.4
CDHR3-201ENST00000317716 LOC400499M0QZD8 3231 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 DCHS1Q96JQ0 3298 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 TRAV24A0A0B4J272 114 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 P01737 135 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 REG1AP05451 166 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 IL6RP08887 468 aaPredicted RBP6.31□□□□□ -1.4
CDHR3-201ENST00000317716 CELA3AP09093 270 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 FAM87AP0C7U9 286 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 GCSHP23434 173 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 ERHP84090 104 aaKnown RBP6.31□□□□□ -1.4
CDHR3-201ENST00000317716 LSM10Q969L4 123 aaKnown RBP6.31□□□□□ -1.4
CDHR3-201ENST00000317716 LINC00479Q96M42 142 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 TMEM167BQ9NRX6 74 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 A0A087X0K7 114 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 H3BUT2 72 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 J3QR06 171 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 AMY1AP04745 511 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 TDGF1P13385 188 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 MYOD1P15172 320 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 LMO1P25800 156 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 GFRA1P56159 465 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 FXYD7P58549 80 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 MRPS11P82912 194 aaKnown RBP6.31□□□□□ -1.4
CDHR3-201ENST00000317716 DEFB109BQ30KR1 87 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 WFDC8Q8IUA0 241 aa6.31□□□□□ -1.4
CDHR3-201ENST00000317716 SAXO1Q8IYX7 474 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms