RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 C1RLQ9NZP8 487 aa12.35□□□□□ -0.43
HNF4A-202ENST00000316673 OR51B2Q9Y5P1 312 aa12.35□□□□□ -0.43
HNF4A-202ENST00000316673 A0A1W2PN81 502 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 H3BUX3 64 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 HOXA3O43365 443 aaPredicted RBP12.34□□□□□ -0.43
HNF4A-202ENST00000316673 JTBO76095 146 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 NXPH3O95157 252 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 CHRNA7P36544 502 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 HOXA1P49639 335 aaPredicted RBP12.34□□□□□ -0.43
HNF4A-202ENST00000316673 OR2B8PP59922 312 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 HES1Q14469 280 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 ZNF266Q14584 549 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 OR8H1Q8NGG4 311 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 OR1L8Q8NGR8 309 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 ZNF471Q9BX82 626 aaPredicted RBP12.34□□□□□ -0.43
HNF4A-202ENST00000316673 QTRT1Q9BXR0 403 aaKnown RBP12.34□□□□□ -0.43
HNF4A-202ENST00000316673 PLEKHA3Q9HB20 300 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 VPREB3Q9UKI3 123 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 BOLA1Q9Y3E2 137 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 STRAPQ9Y3F4 350 aaKnown RBP12.34□□□□□ -0.43
HNF4A-202ENST00000316673 ANK3Q12955 4377 aaKnown RBP12.34□□□□□ -0.43
HNF4A-202ENST00000316673 IGHV3-72A0A0B4J1Y9 119 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 DNAJC9-AS1A6NH13 148 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 TRIM77I1YAP6 450 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 DFFBO76075 338 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 VENTXO95231 258 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 IL6RP08887 468 aaPredicted RBP12.34□□□□□ -0.43
HNF4A-202ENST00000316673 TPT1P13693 172 aaKnown RBP12.34□□□□□ -0.43
HNF4A-202ENST00000316673 RPL15P61313 204 aaKnown RBP12.34□□□□□ -0.43
HNF4A-202ENST00000316673 RAB11AP62491 216 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 PLGLAQ15195 96 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 TMEM252Q8N6L7 170 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 HEYLQ9NQ87 328 aaPredicted RBP12.34□□□□□ -0.43
HNF4A-202ENST00000316673 TCF19Q9Y242 345 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 U3KQ87 197 aa12.34□□□□□ -0.43
HNF4A-202ENST00000316673 DNHD1Q96M86 4753 aa12.33□□□□□ -0.44
HNF4A-202ENST00000316673 SLC25A17O43808 307 aa12.33□□□□□ -0.44
HNF4A-202ENST00000316673 IGHV4-59P01825 116 aa12.33□□□□□ -0.44
HNF4A-202ENST00000316673 IAPPP10997 89 aa12.33□□□□□ -0.44
HNF4A-202ENST00000316673 SULT1A1P50225 295 aa12.33□□□□□ -0.44
HNF4A-202ENST00000316673 PRCDQ00LT1 54 aa12.33□□□□□ -0.44
HNF4A-202ENST00000316673 EWSR1Q01844 656 aaKnown RBP eCLIP12.33□□□□□ -0.44
HNF4A-202ENST00000316673 C16orf82Q7Z2V1 217 aa12.33□□□□□ -0.44
HNF4A-202ENST00000316673 OR1S2Q8NGQ3 325 aa12.33□□□□□ -0.44
HNF4A-202ENST00000316673 CFHR4Q92496 578 aa12.33□□□□□ -0.44
HNF4A-202ENST00000316673 PHYHIPLQ96FC7 376 aa12.33□□□□□ -0.44
HNF4A-202ENST00000316673 C11orf1Q9H5F2 150 aa12.33□□□□□ -0.44
HNF4A-202ENST00000316673 SRRM4A7MD48 611 aaKnown RBP12.32□□□□□ -0.44
HNF4A-202ENST00000316673 RGS13O14921 159 aa12.32□□□□□ -0.44
HNF4A-202ENST00000316673 NBR2O15453 112 aa12.32□□□□□ -0.44
HNF4A-202ENST00000316673 TSPAN9O75954 239 aa12.32□□□□□ -0.44
HNF4A-202ENST00000316673 IGKV1D-33P01593 117 aa12.32□□□□□ -0.44
HNF4A-202ENST00000316673 IGKV1-33P01594 117 aa12.32□□□□□ -0.44
HNF4A-202ENST00000316673 RNASE1P07998 156 aaKnown RBP12.32□□□□□ -0.44
HNF4A-202ENST00000316673 SNRNP70P08621 437 aaKnown RBP12.32□□□□□ -0.44
HNF4A-202ENST00000316673 ERHP84090 104 aaKnown RBP12.32□□□□□ -0.44
HNF4A-202ENST00000316673 MMDQ15546 238 aa12.32□□□□□ -0.44
HNF4A-202ENST00000316673 SPANXN5Q5MJ07 72 aa12.32□□□□□ -0.44
HNF4A-202ENST00000316673 HSD17B13Q7Z5P4 300 aaPredicted RBP12.32□□□□□ -0.44
HNF4A-202ENST00000316673 PIFOQ8TCI5 191 aa12.32□□□□□ -0.44
HNF4A-202ENST00000316673 PINX1Q96BK5 328 aaKnown RBP12.32□□□□□ -0.44
HNF4A-202ENST00000316673 METTL1Q9UBP6 276 aaKnown RBP12.32□□□□□ -0.44
HNF4A-202ENST00000316673 PAIP2BQ9ULR5 123 aaKnown RBP12.32□□□□□ -0.44
HNF4A-202ENST00000316673 TET2Q6N021 2002 aaPredicted RBP12.32□□□□□ -0.44
HNF4A-202ENST00000316673 FAM24AA6NFZ4 105 aa12.31□□□□□ -0.44
HNF4A-202ENST00000316673 IGLV2-23P01705 113 aa12.31□□□□□ -0.44
HNF4A-202ENST00000316673 TMEM11P17152 192 aa12.31□□□□□ -0.44
HNF4A-202ENST00000316673 PAX6P26367 422 aa12.31□□□□□ -0.44
HNF4A-202ENST00000316673 SUB1P53999 127 aaKnown RBP eCLIP12.31□□□□□ -0.44
HNF4A-202ENST00000316673 EBI3Q14213 229 aa12.31□□□□□ -0.44
HNF4A-202ENST00000316673 PSG5Q15238 335 aa12.31□□□□□ -0.44
HNF4A-202ENST00000316673 ATP6V1FQ16864 119 aa12.31□□□□□ -0.44
HNF4A-202ENST00000316673 TEX261Q6UWH6 196 aa12.31□□□□□ -0.44
HNF4A-202ENST00000316673 PPP1R27Q86WC6 154 aa12.31□□□□□ -0.44
HNF4A-202ENST00000316673 NPBQ8NG41 125 aa12.31□□□□□ -0.44
HNF4A-202ENST00000316673 STOML3Q8TAV4 291 aa12.31□□□□□ -0.44
HNF4A-202ENST00000316673 UBQLN2Q9UHD9 624 aa12.31□□□□□ -0.44
HNF4A-202ENST00000316673 SIGLEC9Q9Y336 463 aa12.31□□□□□ -0.44
HNF4A-202ENST00000316673 MSGN1A6NI15 193 aa12.3□□□□□ -0.44
HNF4A-202ENST00000316673 M0QZK8 103 aa12.3□□□□□ -0.44
HNF4A-202ENST00000316673 RRHO14718 337 aa12.3□□□□□ -0.44
HNF4A-202ENST00000316673 IFNA10P01566 189 aa12.3□□□□□ -0.44
HNF4A-202ENST00000316673 OR8U8P0C7N1 319 aa12.3□□□□□ -0.44
HNF4A-202ENST00000316673 HTR2BP41595 481 aa12.3□□□□□ -0.44
HNF4A-202ENST00000316673 RAB14P61106 215 aa12.3□□□□□ -0.44
HNF4A-202ENST00000316673 STPG2Q8N412 459 aa12.3□□□□□ -0.44
HNF4A-202ENST00000316673 LILRB2Q8N423 598 aa12.3□□□□□ -0.44
HNF4A-202ENST00000316673 OR10P1Q8NGE3 313 aa12.3□□□□□ -0.44
HNF4A-202ENST00000316673 EAF1Q96JC9 268 aaPredicted RBP12.3□□□□□ -0.44
HNF4A-202ENST00000316673 SRSF8Q9BRL6 282 aaKnown RBP12.3□□□□□ -0.44
HNF4A-202ENST00000316673 HINT2Q9BX68 163 aa12.3□□□□□ -0.44
HNF4A-202ENST00000316673 ESM1Q9NQ30 184 aa12.3□□□□□ -0.44
HNF4A-202ENST00000316673 FBXL17Q9UF56 701 aa12.3□□□□□ -0.44
HNF4A-202ENST00000316673 TNCP24821 2201 aa12.29□□□□□ -0.44
HNF4A-202ENST00000316673 TRAV3A0A0B4J244 114 aa12.29□□□□□ -0.44
HNF4A-202ENST00000316673 A6NDX4 124 aa12.29□□□□□ -0.44
HNF4A-202ENST00000316673 INS-IGF2F8WCM5 200 aa12.29□□□□□ -0.44
HNF4A-202ENST00000316673 IFNA5P01569 189 aa12.29□□□□□ -0.44
HNF4A-202ENST00000316673 SNCAP37840 140 aa12.29□□□□□ -0.44
HNF4A-202ENST00000316673 COMPP49747 757 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms