RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 MGST2Q99735 147 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 COMMD5Q9GZQ3 224 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 ONECUT1Q9UBC0 465 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 PLXNB1O43157 2135 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 E7EUB6 86 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 BUB1B-PAK6H3BSN5 160 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 LIPFP07098 398 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 BCL2P10415 239 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 ATF4P18848 351 aaPredicted RBP14.85□□□□□ -0.03
CCDC43-201ENST00000315286 ACTR3CQ9C0K3 210 aaPredicted RBP14.85□□□□□ -0.03
CCDC43-201ENST00000315286 UBTD1Q9HAC8 227 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 PATZ1Q9HBE1 687 aaKnown RBP14.85□□□□□ -0.03
CCDC43-201ENST00000315286 NPVFQ9HCQ7 196 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 NDUFA4L2Q9NRX3 87 aa14.85□□□□□ -0.03
CCDC43-201ENST00000315286 M0R036 132 aa14.84□□□□□ -0.03
CCDC43-201ENST00000315286 ENSAO43768 121 aaKnown RBP14.84□□□□□ -0.03
CCDC43-201ENST00000315286 NDUFS7O75251 213 aa14.84□□□□□ -0.03
CCDC43-201ENST00000315286 SNRNP70P08621 437 aaKnown RBP14.84□□□□□ -0.03
CCDC43-201ENST00000315286 GCSAMLQ5JQS6 135 aa14.84□□□□□ -0.03
CCDC43-201ENST00000315286 BEND2Q8NDZ0 799 aa14.84□□□□□ -0.03
CCDC43-201ENST00000315286 OR4A5Q8NH83 315 aa14.84□□□□□ -0.03
CCDC43-201ENST00000315286 VSTM2AQ8TAG5 236 aa14.84□□□□□ -0.03
CCDC43-201ENST00000315286 RAB24Q969Q5 203 aa14.84□□□□□ -0.03
CCDC43-201ENST00000315286 LSM4Q9Y4Z0 139 aaKnown RBP14.84□□□□□ -0.03
CCDC43-201ENST00000315286 AKAP6Q13023 2319 aa14.84□□□□□ -0.03
CCDC43-201ENST00000315286 C7orf77A4D0Y5 90 aa14.83□□□□□ -0.03
CCDC43-201ENST00000315286 ACOT6Q3I5F7 207 aaPredicted RBP14.83□□□□□ -0.03
CCDC43-201ENST00000315286 OR1L8Q8NGR8 309 aa14.83□□□□□ -0.03
CCDC43-201ENST00000315286 GGTLC1Q9BX51 225 aa14.83□□□□□ -0.03
CCDC43-201ENST00000315286 TMPRSS5Q9H3S3 457 aa14.83□□□□□ -0.03
CCDC43-201ENST00000315286 UNKLQ9H9P5 680 aaKnown RBP14.83□□□□□ -0.03
CCDC43-201ENST00000315286 RPS10P5Q9NQ39 176 aa14.83□□□□□ -0.03
CCDC43-201ENST00000315286 PUS1Q9Y606 427 aaKnown RBP eCLIP14.83□□□□□ -0.03
CCDC43-201ENST00000315286 LOC105371267A0A1B0GV96 52 aa14.83□□□□□ -0.04
CCDC43-201ENST00000315286 hCG_1809904A0A1W2PP81 198 aa14.83□□□□□ -0.04
CCDC43-201ENST00000315286 A0A1W2PPE2 198 aa14.83□□□□□ -0.04
CCDC43-201ENST00000315286 A0A1W2PR64 198 aa14.83□□□□□ -0.04
CCDC43-201ENST00000315286 A0A1W2PRV1 198 aa14.83□□□□□ -0.04
CCDC43-201ENST00000315286 CYB5BO43169 146 aa14.83□□□□□ -0.04
CCDC43-201ENST00000315286 SLC25A17O43808 307 aa14.83□□□□□ -0.04
CCDC43-201ENST00000315286 OPRK1P41145 380 aa14.83□□□□□ -0.04
CCDC43-201ENST00000315286 BSXQ3C1V8 233 aa14.83□□□□□ -0.04
CCDC43-201ENST00000315286 OR4P4Q8NGL7 312 aa14.83□□□□□ -0.04
CCDC43-201ENST00000315286 ZNF430Q9H8G1 570 aaPredicted RBP14.83□□□□□ -0.04
CCDC43-201ENST00000315286 SPTAN1Q13813 2472 aaKnown RBP14.83□□□□□ -0.04
CCDC43-201ENST00000315286 YIF1AO95070 293 aa14.82□□□□□ -0.04
CCDC43-201ENST00000315286 ARF6P62330 175 aa14.82□□□□□ -0.04
CCDC43-201ENST00000315286 PMS2P11Q13670 270 aa14.82□□□□□ -0.04
CCDC43-201ENST00000315286 PNKDQ8N490 385 aa14.82□□□□□ -0.04
CCDC43-201ENST00000315286 SSBP3Q9BWW4 388 aaPredicted RBP14.82□□□□□ -0.04
CCDC43-201ENST00000315286 TPSG1Q9NRR2 321 aa14.82□□□□□ -0.04
CCDC43-201ENST00000315286 INSIG2Q9Y5U4 225 aa14.82□□□□□ -0.04
CCDC43-201ENST00000315286 IGHV1-3A0A0C4DH29 117 aa14.81□□□□□ -0.04
CCDC43-201ENST00000315286 CGB1A6NKQ9 187 aa14.81□□□□□ -0.04
CCDC43-201ENST00000315286 RNASE2P10153 161 aaKnown RBP14.81□□□□□ -0.04
CCDC43-201ENST00000315286 C2orf83Q53S99 150 aa14.81□□□□□ -0.04
CCDC43-201ENST00000315286 C10orf55Q5SWW7 151 aa14.81□□□□□ -0.04
CCDC43-201ENST00000315286 MIC13Q5XKP0 118 aa14.81□□□□□ -0.04
CCDC43-201ENST00000315286 VAX2Q9UIW0 290 aa14.81□□□□□ -0.04
CCDC43-201ENST00000315286 PXMP4Q9Y6I8 212 aa14.81□□□□□ -0.04
CCDC43-201ENST00000315286 IGFBP2P18065 325 aa14.81□□□□□ -0.04
CCDC43-201ENST00000315286 LGALS7P47929 136 aa14.81□□□□□ -0.04
CCDC43-201ENST00000315286 CDC34P49427 236 aaPredicted RBP14.81□□□□□ -0.04
CCDC43-201ENST00000315286 MRGPRG-AS1Q2M3A8 158 aa14.81□□□□□ -0.04
CCDC43-201ENST00000315286 VMA21Q3ZAQ7 101 aa14.81□□□□□ -0.04
CCDC43-201ENST00000315286 TEPPQ6URK8 271 aa14.81□□□□□ -0.04
CCDC43-201ENST00000315286 MOB3BQ86TA1 216 aa14.81□□□□□ -0.04
CCDC43-201ENST00000315286 NAV3Q8IVL0 2385 aa14.81□□□□□ -0.04
CCDC43-201ENST00000315286 LOC105371242A0A075B767 164 aa14.8□□□□□ -0.04
CCDC43-201ENST00000315286 H3BQ15 152 aa14.8□□□□□ -0.04
CCDC43-201ENST00000315286 IFNA1P01562 189 aa14.8□□□□□ -0.04
CCDC43-201ENST00000315286 ATP5IP56385 69 aaPredicted RBP14.8□□□□□ -0.04
CCDC43-201ENST00000315286 SSMEM1Q8WWF3 244 aa14.8□□□□□ -0.04
CCDC43-201ENST00000315286 FAM122AQ96E09 287 aa14.8□□□□□ -0.04
CCDC43-201ENST00000315286 SIRT7Q9NRC8 400 aa14.8□□□□□ -0.04
CCDC43-201ENST00000315286 SMCO4Q9NRQ5 59 aa14.8□□□□□ -0.04
CCDC43-201ENST00000315286 A6NNC1 897 aa14.8□□□□□ -0.04
CCDC43-201ENST00000315286 SEC14L6B5MCN3 397 aa14.8□□□□□ -0.04
CCDC43-201ENST00000315286 SOX15O60248 233 aa14.8□□□□□ -0.04
CCDC43-201ENST00000315286 GPR6P46095 362 aaPredicted RBP14.8□□□□□ -0.04
CCDC43-201ENST00000315286 ERHP84090 104 aaKnown RBP14.8□□□□□ -0.04
CCDC43-201ENST00000315286 MLANAQ16655 118 aa14.8□□□□□ -0.04
CCDC43-201ENST00000315286 RBMS3Q6XE24 437 aaKnown RBP14.8□□□□□ -0.04
CCDC43-201ENST00000315286 CACNA1BQ00975 2339 aa14.79□□□□□ -0.04
CCDC43-201ENST00000315286 FNDC10F2Z333 226 aa14.79□□□□□ -0.04
CCDC43-201ENST00000315286 INS-IGF2F8WCM5 200 aa14.79□□□□□ -0.04
CCDC43-201ENST00000315286 LY6LH3BQJ8 138 aa14.79□□□□□ -0.04
CCDC43-201ENST00000315286 CNTFRP26992 372 aa14.79□□□□□ -0.04
CCDC43-201ENST00000315286 LDLRAD2Q5SZI1 272 aa14.79□□□□□ -0.04
CCDC43-201ENST00000315286 RPEQ96AT9 228 aa14.79□□□□□ -0.04
CCDC43-201ENST00000315286 AMMECR1Q9Y4X0 333 aaPredicted RBP14.79□□□□□ -0.04
CCDC43-201ENST00000315286 MED13LQ71F56 2210 aa14.78□□□□□ -0.04
CCDC43-201ENST00000315286 WT1-ASQ06250 92 aa14.78□□□□□ -0.04
CCDC43-201ENST00000315286 FAM90A2PQ658T7 463 aa14.78□□□□□ -0.04
CCDC43-201ENST00000315286 GATAD1Q8WUU5 269 aa14.78□□□□□ -0.04
CCDC43-201ENST00000315286 P2RX4Q99571 388 aa14.78□□□□□ -0.04
CCDC43-201ENST00000315286 ASH1LQ9NR48 2969 aaKnown RBP14.78□□□□□ -0.04
CCDC43-201ENST00000315286 A0A1W2PN81 502 aa14.78□□□□□ -0.04
CCDC43-201ENST00000315286 CHRNA7P36544 502 aa14.78□□□□□ -0.04
CCDC43-201ENST00000315286 RHEBQ15382 184 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms