RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 MBD3L1Q8WWY6 194 aa19.01■□□□□ 0.63
SNCB-201ENST00000310112 NARS2Q96I59 477 aaKnown RBP19.01■□□□□ 0.63
SNCB-201ENST00000310112 RFNGQ9Y644 331 aa19.01■□□□□ 0.63
SNCB-201ENST00000310112 UBE2E1P51965 193 aa19■□□□□ 0.63
SNCB-201ENST00000310112 RPRMQ9NS64 109 aa19■□□□□ 0.63
SNCB-201ENST00000310112 KIAA1456Q9P272 454 aa19■□□□□ 0.63
SNCB-201ENST00000310112 SIGLEC9Q9Y336 463 aa19■□□□□ 0.63
SNCB-201ENST00000310112 HRNRQ86YZ3 2850 aaPredicted RBP18.99■□□□□ 0.63
SNCB-201ENST00000310112 TIMM23O14925 209 aa18.99■□□□□ 0.63
SNCB-201ENST00000310112 ACTL6BO94805 426 aa18.99■□□□□ 0.63
SNCB-201ENST00000310112 VENTXO95231 258 aa18.99■□□□□ 0.63
SNCB-201ENST00000310112 RNASE2P10153 161 aaKnown RBP18.99■□□□□ 0.63
SNCB-201ENST00000310112 MYOD1P15172 320 aa18.99■□□□□ 0.63
SNCB-201ENST00000310112 KLRD1Q13241 179 aa18.99■□□□□ 0.63
SNCB-201ENST00000310112 RAB31Q13636 194 aa18.99■□□□□ 0.63
SNCB-201ENST00000310112 TUSC1Q2TAM9 212 aa18.99■□□□□ 0.63
SNCB-201ENST00000310112 CFHR4Q92496 578 aa18.99■□□□□ 0.63
SNCB-201ENST00000310112 LPAR2Q9HBW0 351 aa18.99■□□□□ 0.63
SNCB-201ENST00000310112 TSPAN9O75954 239 aa18.98■□□□□ 0.63
SNCB-201ENST00000310112 GUK1Q16774 197 aa18.98■□□□□ 0.63
SNCB-201ENST00000310112 SPSB3Q6PJ21 355 aa18.98■□□□□ 0.63
SNCB-201ENST00000310112 TREML4Q6UXN2 200 aa18.98■□□□□ 0.63
SNCB-201ENST00000310112 CACNG8Q8WXS5 425 aa18.98■□□□□ 0.63
SNCB-201ENST00000310112 SRSF8Q9BRL6 282 aaKnown RBP18.98■□□□□ 0.63
SNCB-201ENST00000310112 RELNP78509 3460 aa18.98■□□□□ 0.63
SNCB-201ENST00000310112 CFAP46Q8IYW2 2715 aa18.98■□□□□ 0.63
SNCB-201ENST00000310112 GPX4P36969 197 aaPredicted RBP18.97■□□□□ 0.63
SNCB-201ENST00000310112 OPRK1P41145 380 aa18.97■□□□□ 0.63
SNCB-201ENST00000310112 RPL27AP46776 148 aaKnown RBP18.97■□□□□ 0.63
SNCB-201ENST00000310112 PRB3Q04118 309 aaPredicted RBP18.97■□□□□ 0.63
SNCB-201ENST00000310112 ACOT6Q3I5F7 207 aaPredicted RBP18.97■□□□□ 0.63
SNCB-201ENST00000310112 C10orf91Q5T1B1 145 aa18.97■□□□□ 0.63
SNCB-201ENST00000310112 PPP1R27Q86WC6 154 aa18.97■□□□□ 0.63
SNCB-201ENST00000310112 RNASEH2CQ8TDP1 164 aaKnown RBP18.97■□□□□ 0.63
SNCB-201ENST00000310112 SEC11CQ9BY50 192 aa18.97■□□□□ 0.63
SNCB-201ENST00000310112 METTL1Q9UBP6 276 aaKnown RBP18.97■□□□□ 0.63
SNCB-201ENST00000310112 SMCO3A2RU48 225 aa18.96■□□□□ 0.63
SNCB-201ENST00000310112 AGPAT2O15120 278 aa18.96■□□□□ 0.63
SNCB-201ENST00000310112 MOSP00540 346 aa18.96■□□□□ 0.63
SNCB-201ENST00000310112 COMPP49747 757 aaPredicted RBP18.96■□□□□ 0.63
SNCB-201ENST00000310112 PMS2P11Q13670 270 aa18.96■□□□□ 0.63
SNCB-201ENST00000310112 MRGPRG-AS1Q2M3A8 158 aa18.96■□□□□ 0.63
SNCB-201ENST00000310112 LDLRAD2Q5SZI1 272 aa18.96■□□□□ 0.63
SNCB-201ENST00000310112 NPBQ8NG41 125 aa18.96■□□□□ 0.63
SNCB-201ENST00000310112 OR2T10Q8NGZ9 312 aa18.96■□□□□ 0.63
SNCB-201ENST00000310112 SFT2D1Q8WV19 159 aa18.96■□□□□ 0.63
SNCB-201ENST00000310112 MALSU1Q96EH3 234 aa18.96■□□□□ 0.63
SNCB-201ENST00000310112 RITA1Q96K30 269 aa18.96■□□□□ 0.63
SNCB-201ENST00000310112 CARHSP1Q9Y2V2 147 aaKnown RBP18.96■□□□□ 0.63
SNCB-201ENST00000310112 LSM4Q9Y4Z0 139 aaKnown RBP18.96■□□□□ 0.63
SNCB-201ENST00000310112 OPN1MWP04001 364 aa18.95■□□□□ 0.62
SNCB-201ENST00000310112 OPN1MW2P0DN77 364 aa18.95■□□□□ 0.62
SNCB-201ENST00000310112 OPN1MW3P0DN78 364 aa18.95■□□□□ 0.62
SNCB-201ENST00000310112 M6PRP20645 277 aa18.95■□□□□ 0.62
SNCB-201ENST00000310112 FFAR4Q5NUL3 377 aa18.95■□□□□ 0.62
SNCB-201ENST00000310112 TEPPQ6URK8 271 aa18.95■□□□□ 0.62
SNCB-201ENST00000310112 ZNF114Q8NC26 417 aa18.95■□□□□ 0.62
SNCB-201ENST00000310112 RCC1LQ96I51 464 aaKnown RBP18.95■□□□□ 0.62
SNCB-201ENST00000310112 TBX15Q96SF7 602 aa18.95■□□□□ 0.62
SNCB-201ENST00000310112 HILPDAQ9Y5L2 63 aa18.95■□□□□ 0.62
SNCB-201ENST00000310112 CTXND1A0A1B0GTU2 59 aa18.94■□□□□ 0.62
SNCB-201ENST00000310112 CGB1A6NKQ9 187 aa18.94■□□□□ 0.62
SNCB-201ENST00000310112 CYB5BO43169 146 aa18.94■□□□□ 0.62
SNCB-201ENST00000310112 NDUFA3O95167 84 aa18.94■□□□□ 0.62
SNCB-201ENST00000310112 SNRNP70P08621 437 aaKnown RBP18.94■□□□□ 0.62
SNCB-201ENST00000310112 SRSF3P84103 164 aaKnown RBP18.94■□□□□ 0.62
SNCB-201ENST00000310112 TMEM144Q7Z5S9 345 aa18.94■□□□□ 0.62
SNCB-201ENST00000310112 LHFPL4Q7Z7J7 247 aa18.94■□□□□ 0.62
SNCB-201ENST00000310112 SCRT1Q9BWW7 348 aa18.94■□□□□ 0.62
SNCB-201ENST00000310112 ACTR3CQ9C0K3 210 aaPredicted RBP18.94■□□□□ 0.62
SNCB-201ENST00000310112 EIF5A2Q9GZV4 153 aaKnown RBP18.94■□□□□ 0.62
SNCB-201ENST00000310112 SLC39A9Q9NUM3 307 aa18.94■□□□□ 0.62
SNCB-201ENST00000310112 ELLP55199 621 aaPredicted RBP18.93■□□□□ 0.62
SNCB-201ENST00000310112 PAX8Q06710 450 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 CD69Q07108 199 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 EBI3Q14213 229 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 ARSJQ5FYB0 599 aaPredicted RBP18.93■□□□□ 0.62
SNCB-201ENST00000310112 ACSM6Q6P461 480 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 OR10W1Q8NGF6 305 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 OR10G4Q8NGN3 311 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 OR10G9Q8NGN4 311 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 OR10G7Q8NGN6 311 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 RBFOX3A6NFN3 312 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 F8W036 122 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 NBR2O15453 112 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 APOC3P02656 99 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 SLC25A16P16260 332 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 AKR1C1Q04828 323 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 TNXAQ16473 311 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 ZNF787Q6DD87 383 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 PVRIGQ6DKI7 326 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 SVBPQ8N300 66 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 VSIRQ9H7M9 311 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 TPSG1Q9NRR2 321 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 FAM96BQ9Y3D0 163 aa18.93■□□□□ 0.62
SNCB-201ENST00000310112 IGHV4-61A0A0C4DH41 118 aa18.92■□□□□ 0.62
SNCB-201ENST00000310112 FAM157AC9JC47 383 aa18.92■□□□□ 0.62
SNCB-201ENST00000310112 OR13C7P0DN81 318 aa18.92■□□□□ 0.62
SNCB-201ENST00000310112 CNTFRP26992 372 aa18.92■□□□□ 0.62
SNCB-201ENST00000310112 TAGLN2P37802 199 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms