RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 TRAV3A0A0B4J244 114 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 UCP1P25874 307 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 SRPXP78539 464 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 DEFA6Q01524 100 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 EXOSC2Q13868 293 aaKnown RBP15.36■□□□□ 0.05
VEGFB-201ENST00000309422 KIAA0141Q14154 515 aaPredicted RBP15.36■□□□□ 0.05
VEGFB-201ENST00000309422 TATDN3Q17R31 274 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 SP6Q3SY56 376 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 OXLD1Q5BKU9 147 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 C9orf66Q5T8R8 295 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 TMED4Q7Z7H5 227 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 SEC22AQ96IW7 307 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 ALX4Q9H161 411 aaPredicted RBP15.36■□□□□ 0.05
VEGFB-201ENST00000309422 BATF3Q9NR55 127 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 NSG2Q9Y328 171 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 CRYM-AS1A6NIL9 109 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 OR2J3O76001 311 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 PRH1P02810 166 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 AREGP15514 252 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 AKR1C4P17516 323 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 FAM219AQ8IW50 185 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 OR1L6Q8NGR2 347 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 RBPMSQ93062 196 aaKnown RBP15.36■□□□□ 0.05
VEGFB-201ENST00000309422 TMEM222Q9H0R3 208 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 PLEKHA3Q9HB20 300 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 ENY2Q9NPA8 101 aa15.36■□□□□ 0.05
VEGFB-201ENST00000309422 PEF1Q9UBV8 284 aaKnown RBP15.36■□□□□ 0.05
VEGFB-201ENST00000309422 IGHV4OR15-8A0A075B7B6 117 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 A0A087WW49 117 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 ANKRD34BA5PLL1 514 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 SEC14L6B5MCN3 397 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 OVOL1O14753 267 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 REG1AP05451 166 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 CRYGCP07315 174 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 OR13C7P0DN81 318 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 MYOD1P15172 320 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 CTRB1P17538 263 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 RBMS2Q15434 407 aaKnown RBP15.35■□□□□ 0.05
VEGFB-201ENST00000309422 C15orf32Q32M92 178 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 CTRB2Q6GPI1 263 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 LINC00299Q6ZSB3 139 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 REC114Q7Z4M0 266 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 SLC35G3Q8N808 338 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 S100ZQ8WXG8 99 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 EEF1AKMT3Q96AZ1 226 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 CXorf58Q96LI9 332 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 C7orf50Q9BRJ6 194 aaKnown RBP15.35■□□□□ 0.05
VEGFB-201ENST00000309422 RTBDNQ9BSG5 229 aaPredicted RBP15.35■□□□□ 0.05
VEGFB-201ENST00000309422 AKIP1Q9NQ31 210 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 CACFD1Q9UGQ2 172 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 FBXL7Q9UJT9 491 aa15.35■□□□□ 0.05
VEGFB-201ENST00000309422 CMYA5Q8N3K9 4069 aa15.34■□□□□ 0.05
VEGFB-201ENST00000309422 WNK1Q9H4A3 2382 aa15.34■□□□□ 0.05
VEGFB-201ENST00000309422 TEX50A0A1B0GTY4 177 aa15.34■□□□□ 0.05
VEGFB-201ENST00000309422 IFNA17P01571 189 aa15.34■□□□□ 0.05
VEGFB-201ENST00000309422 RPEL1Q2QD12 228 aa15.34■□□□□ 0.05
VEGFB-201ENST00000309422 ELOVL1Q9BW60 279 aa15.34■□□□□ 0.05
VEGFB-201ENST00000309422 TMEM14BQ9NUH8 114 aa15.34■□□□□ 0.05
VEGFB-201ENST00000309422 NBEAL1Q6ZS30 2694 aa15.33■□□□□ 0.04
VEGFB-201ENST00000309422 ERHP84090 104 aaKnown RBP15.33■□□□□ 0.04
VEGFB-201ENST00000309422 DEFA5Q01523 94 aa15.33■□□□□ 0.04
VEGFB-201ENST00000309422 TMEM268Q5VZI3 342 aa15.33■□□□□ 0.04
VEGFB-201ENST00000309422 NDUFA4L2Q9NRX3 87 aa15.33■□□□□ 0.04
VEGFB-201ENST00000309422 TRBV9A0A0B4J1U6 114 aa15.32■□□□□ 0.04
VEGFB-201ENST00000309422 LINC00854A0A1B0GVQ3 168 aa15.32■□□□□ 0.04
VEGFB-201ENST00000309422 IGLC7A0M8Q6 106 aa15.32■□□□□ 0.04
VEGFB-201ENST00000309422 E7EUB6 86 aa15.32■□□□□ 0.04
VEGFB-201ENST00000309422 IGKV1-39P01597 117 aa15.32■□□□□ 0.04
VEGFB-201ENST00000309422 IGKV1D-39P04432 117 aa15.32■□□□□ 0.04
VEGFB-201ENST00000309422 VAMP1P23763 118 aa15.32■□□□□ 0.04
VEGFB-201ENST00000309422 HOXD3P31249 432 aaPredicted RBP15.32■□□□□ 0.04
VEGFB-201ENST00000309422 HOXA1P49639 335 aaPredicted RBP15.32■□□□□ 0.04
VEGFB-201ENST00000309422 INSL3P51460 131 aa15.32■□□□□ 0.04
VEGFB-201ENST00000309422 SLURP1P55000 103 aa15.32■□□□□ 0.04
VEGFB-201ENST00000309422 CNPY1Q3B7I2 92 aa15.32■□□□□ 0.04
VEGFB-201ENST00000309422 BEAN1Q3B7T3 259 aa15.32■□□□□ 0.04
VEGFB-201ENST00000309422 ZNF343Q6P1L6 599 aa15.32■□□□□ 0.04
VEGFB-201ENST00000309422 ZNF429Q86V71 674 aa15.32■□□□□ 0.04
VEGFB-201ENST00000309422 IL22RA2Q969J5 263 aa15.32■□□□□ 0.04
VEGFB-201ENST00000309422 GALNT14Q96FL9 552 aa15.32■□□□□ 0.04
VEGFB-201ENST00000309422 CCDC32Q9BV29 185 aa15.32■□□□□ 0.04
VEGFB-201ENST00000309422 PTTG2Q9NZH5 202 aa15.32■□□□□ 0.04
VEGFB-201ENST00000309422 CDS2O95674 445 aa15.31■□□□□ 0.04
VEGFB-201ENST00000309422 IL7P13232 177 aa15.31■□□□□ 0.04
VEGFB-201ENST00000309422 HSPE1P61604 102 aaKnown RBP15.31■□□□□ 0.04
VEGFB-201ENST00000309422 PRCDQ00LT1 54 aa15.31■□□□□ 0.04
VEGFB-201ENST00000309422 BAK1Q16611 211 aa15.31■□□□□ 0.04
VEGFB-201ENST00000309422 TMEM128Q5BJH2 165 aa15.31■□□□□ 0.04
VEGFB-201ENST00000309422 SLC25A24Q6NUK1 477 aa15.31■□□□□ 0.04
VEGFB-201ENST00000309422 LGI3Q8N145 548 aa15.31■□□□□ 0.04
VEGFB-201ENST00000309422 CENPSQ8N2Z9 138 aa15.31■□□□□ 0.04
VEGFB-201ENST00000309422 OR10W1Q8NGF6 305 aa15.31■□□□□ 0.04
VEGFB-201ENST00000309422 DCUN1D4Q92564 292 aa15.31■□□□□ 0.04
VEGFB-201ENST00000309422 OR4C12Q96R67 309 aa15.31■□□□□ 0.04
VEGFB-201ENST00000309422 PKD1L1Q8TDX9 2849 aa15.31■□□□□ 0.04
VEGFB-201ENST00000309422 VWFP04275 2813 aa15.3■□□□□ 0.04
VEGFB-201ENST00000309422 A6NHS1 94 aa15.3■□□□□ 0.04
VEGFB-201ENST00000309422 SAP30O75446 220 aa15.3■□□□□ 0.04
VEGFB-201ENST00000309422 IGKV1-5P01602 117 aa15.3■□□□□ 0.04
VEGFB-201ENST00000309422 SNCAP37840 140 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms