RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 FBXL15Q9H469 300 aa9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 LYNX1G3V0Z9 82 aa9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 CD55P08174 381 aa9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 LYNX1P0DP58 116 aa9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 EGR1P18146 543 aa9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 SRP14P37108 136 aaKnown RBP9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 SSBP3Q9BWW4 388 aaPredicted RBP9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 PCDH15Q96QU1 1955 aa9.51□□□□□ -0.89
PCDHGC3-201ENST00000308177 FOXH1O75593 365 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 COX6B1P14854 86 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 CRYBB3P26998 211 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 MFAP4P55083 255 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 PACRGQ96M98 296 aaPredicted RBP9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 WFIKKN1Q96NZ8 548 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 RRHO14718 337 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 SAA1P0DJI8 122 aaPredicted RBP9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 IGFBP2P18065 325 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 PDLIM4P50479 330 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 C20orf204Q6ZNR8 217 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 PIP4P1Q86T03 277 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 FAM169BQ8N8A8 192 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 PRSS3P2Q8NHM4 247 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 HIST1H2BAQ96A08 127 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 PIMREGQ9BSJ6 248 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 OR51M1Q9H341 326 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 HSPB7Q9UBY9 170 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 ARL2-SNX15V9GYD0 113 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 UPK2O00526 184 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 SMIM6P0DI80 62 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 MRPL32Q9BYC8 188 aaKnown RBP9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 RPUSD1Q9UJJ7 312 aaKnown RBP9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 IGKV3-7A0A075B6H7 116 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 ZNF503-AS2A6NEH8 195 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 C15orf61A6NNL5 157 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 MFAP2P55001 183 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 RPL30P62888 115 aaKnown RBP9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 IBA57Q5T440 356 aaKnown RBP9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 COQ2Q96H96 371 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 VAMP8Q9BV40 100 aa9.5□□□□□ -0.89
PCDHGC3-201ENST00000308177 TGIF2-C20orf24A0A0A6YYL0 155 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 NPIPB11E5RHQ5 1161 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 MOSP00540 346 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 HERPUD1Q15011 391 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 WDR25Q64LD2 544 aaPredicted RBP9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 PRNTQ86SH4 94 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 KLHDC1Q8N7A1 406 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 C5orf17Q8NAS9 161 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 CLDND2Q8NHS1 167 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 RNF166Q96A37 237 aaPredicted RBP9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 DNASE2O00115 360 aaPredicted RBP9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 SLC31A2O15432 143 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 SMIM17P0DL12 118 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 SLC35B1P78383 322 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 SRSF3P84103 164 aaKnown RBP9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 CYP2G1PQ6ZSU1 146 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 OR2D3Q8NGH3 330 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 CLEC5AQ9NY25 188 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 IGKV1-5P01602 117 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 ORM1P02763 201 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 OR9G9P0C7N8 305 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 FCGR2BP31994 310 aaPredicted RBP9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 LY6DQ14210 128 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 TMEM133Q9H2Q1 129 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 NAGKQ9UJ70 344 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 ANAPC10Q9UM13 185 aa9.49□□□□□ -0.89
PCDHGC3-201ENST00000308177 TRAV30A0A087WSZ9 112 aa9.48□□□□□ -0.89
PCDHGC3-201ENST00000308177 IGLV3-1P01715 115 aa9.48□□□□□ -0.89
PCDHGC3-201ENST00000308177 AGAP20933 346 aa9.48□□□□□ -0.89
PCDHGC3-201ENST00000308177 CCKARP32238 428 aa9.48□□□□□ -0.89
PCDHGC3-201ENST00000308177 CACNG8Q8WXS5 425 aa9.48□□□□□ -0.89
PCDHGC3-201ENST00000308177 DPF1Q92782 380 aa9.48□□□□□ -0.89
PCDHGC3-201ENST00000308177 PAX6P26367 422 aa9.48□□□□□ -0.89
PCDHGC3-201ENST00000308177 RIGQ13278 110 aa9.48□□□□□ -0.89
PCDHGC3-201ENST00000308177 IGFL3Q6UXB1 125 aa9.48□□□□□ -0.89
PCDHGC3-201ENST00000308177 ABCA1O95477 2261 aa9.48□□□□□ -0.89
PCDHGC3-201ENST00000308177 A8MWL6 223 aa9.48□□□□□ -0.89
PCDHGC3-201ENST00000308177 GBGT1Q8N5D6 347 aa9.48□□□□□ -0.89
PCDHGC3-201ENST00000308177 CBLN4Q9NTU7 201 aa9.48□□□□□ -0.89
PCDHGC3-201ENST00000308177 ISLRO14498 428 aa9.48□□□□□ -0.89
PCDHGC3-201ENST00000308177 CDKN1AP38936 164 aa9.48□□□□□ -0.89
PCDHGC3-201ENST00000308177 LCN2P80188 198 aa9.48□□□□□ -0.89
PCDHGC3-201ENST00000308177 WDR87Q6ZQQ6 2873 aa9.48□□□□□ -0.89
PCDHGC3-201ENST00000308177 IGKV1D-17A0A075B6S4 117 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 CSN3P07498 182 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 PRB3Q04118 309 aaPredicted RBP9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 TMEM144Q7Z5S9 345 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 ZNF98A6NK75 572 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 IGKV1D-33P01593 117 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 IGKV1-33P01594 117 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 RPRMLQ8N4K4 120 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 TMSB15BA0A087X1C1 80 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 FAM90A9PA6NNJ1 464 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 H3BTX0 84 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 HEPN1Q6WQI6 88 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 NUP37Q8NFH4 326 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 PRO1933Q9H354 126 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 IGKV1-6A0A0C4DH72 117 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 DPRXA6NFQ7 191 aa9.47□□□□□ -0.89
PCDHGC3-201ENST00000308177 BMPR1BO00238 502 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 272.8 ms