RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 OR8G2PQ6IF36 304 aa14.04□□□□□ -0.16
KRT28-201ENST00000306658 ATP5SQ99766 215 aa14.04□□□□□ -0.16
KRT28-201ENST00000306658 FOXC2Q99958 501 aa14.04□□□□□ -0.16
KRT28-201ENST00000306658 FBXL15Q9H469 300 aa14.04□□□□□ -0.16
KRT28-201ENST00000306658 PRRC2AP48634 2157 aaKnown RBP14.03□□□□□ -0.16
KRT28-201ENST00000306658 NDUFA3O95167 84 aa14.03□□□□□ -0.16
KRT28-201ENST00000306658 OR8U8P0C7N1 319 aa14.03□□□□□ -0.16
KRT28-201ENST00000306658 IGHV4-38-2P0DP08 117 aa14.03□□□□□ -0.16
KRT28-201ENST00000306658 RAB14P61106 215 aa14.03□□□□□ -0.16
KRT28-201ENST00000306658 RAB11AP62491 216 aa14.03□□□□□ -0.16
KRT28-201ENST00000306658 BRD3OSQ6XYD6 125 aa14.03□□□□□ -0.16
KRT28-201ENST00000306658 LILRB2Q8N423 598 aa14.03□□□□□ -0.16
KRT28-201ENST00000306658 PINX1Q96BK5 328 aaKnown RBP14.03□□□□□ -0.16
KRT28-201ENST00000306658 FAM96BQ9Y3D0 163 aa14.03□□□□□ -0.16
KRT28-201ENST00000306658 CR1P17927 2039 aa14.03□□□□□ -0.16
KRT28-201ENST00000306658 C15orf62A8K5M9 175 aa14.02□□□□□ -0.16
KRT28-201ENST00000306658 INS-IGF2F8WCM5 200 aa14.02□□□□□ -0.16
KRT28-201ENST00000306658 TMEM11P17152 192 aa14.02□□□□□ -0.16
KRT28-201ENST00000306658 HTR2BP41595 481 aa14.02□□□□□ -0.16
KRT28-201ENST00000306658 ATP5IP56385 69 aaPredicted RBP14.02□□□□□ -0.16
KRT28-201ENST00000306658 ERHP84090 104 aaKnown RBP14.02□□□□□ -0.16
KRT28-201ENST00000306658 SLC38A11Q08AI6 406 aa14.02□□□□□ -0.16
KRT28-201ENST00000306658 TNXAQ16473 311 aa14.02□□□□□ -0.16
KRT28-201ENST00000306658 ATP6V1FQ16864 119 aa14.02□□□□□ -0.16
KRT28-201ENST00000306658 MRGPRG-AS1Q2M3A8 158 aa14.02□□□□□ -0.16
KRT28-201ENST00000306658 CYB5R2Q6BCY4 276 aa14.02□□□□□ -0.16
KRT28-201ENST00000306658 MRPL41Q8IXM3 137 aaKnown RBP14.02□□□□□ -0.16
KRT28-201ENST00000306658 SLC24A4Q8NFF2 622 aa14.02□□□□□ -0.16
KRT28-201ENST00000306658 CCDC168Q8NDH2 2452 aa14.01□□□□□ -0.17
KRT28-201ENST00000306658 ITPR2Q14571 2701 aa14.01□□□□□ -0.17
KRT28-201ENST00000306658 AVPP01185 164 aa14.01□□□□□ -0.17
KRT28-201ENST00000306658 IFNA5P01569 189 aa14.01□□□□□ -0.17
KRT28-201ENST00000306658 SNCAP37840 140 aa14.01□□□□□ -0.17
KRT28-201ENST00000306658 BPIFB3P59826 476 aa14.01□□□□□ -0.17
KRT28-201ENST00000306658 ARL16Q0P5N6 197 aa14.01□□□□□ -0.17
KRT28-201ENST00000306658 HAPLN4Q86UW8 402 aa14.01□□□□□ -0.17
KRT28-201ENST00000306658 Q8N6K4 173 aa14.01□□□□□ -0.17
KRT28-201ENST00000306658 WFDC11Q8NEX6 87 aa14.01□□□□□ -0.17
KRT28-201ENST00000306658 MEGF9Q9H1U4 602 aa14.01□□□□□ -0.17
KRT28-201ENST00000306658 ARV1Q9H2C2 271 aa14.01□□□□□ -0.17
KRT28-201ENST00000306658 C1RLQ9NZP8 487 aa14.01□□□□□ -0.17
KRT28-201ENST00000306658 PMS2P5A8MQ11 134 aa14.01□□□□□ -0.17
KRT28-201ENST00000306658 NPY1RP25929 384 aa14.01□□□□□ -0.17
KRT28-201ENST00000306658 RPL27AP46776 148 aaKnown RBP14.01□□□□□ -0.17
KRT28-201ENST00000306658 COMPP49747 757 aaPredicted RBP14.01□□□□□ -0.17
KRT28-201ENST00000306658 OR10W1Q8NGF6 305 aa14.01□□□□□ -0.17
KRT28-201ENST00000306658 GINS3Q9BRX5 216 aa14.01□□□□□ -0.17
KRT28-201ENST00000306658 HECTD1Q9ULT8 2610 aa14□□□□□ -0.17
KRT28-201ENST00000306658 A0A0U1RQK1 487 aa14□□□□□ -0.17
KRT28-201ENST00000306658 NCBP2LA6PVI3 153 aaKnown RBP14□□□□□ -0.17
KRT28-201ENST00000306658 PLXNB1O43157 2135 aa14□□□□□ -0.17
KRT28-201ENST00000306658 IFNA4P05014 189 aa14□□□□□ -0.17
KRT28-201ENST00000306658 GNB1P62873 340 aa14□□□□□ -0.17
KRT28-201ENST00000306658 NDUFA5Q16718 116 aa14□□□□□ -0.17
KRT28-201ENST00000306658 C5orf64Q2M2E5 130 aa14□□□□□ -0.17
KRT28-201ENST00000306658 KLF17Q5JT82 389 aaPredicted RBP14□□□□□ -0.17
KRT28-201ENST00000306658 C10orf55Q5SWW7 151 aa14□□□□□ -0.17
KRT28-201ENST00000306658 SLC25A24Q6NUK1 477 aa14□□□□□ -0.17
KRT28-201ENST00000306658 ETV3LQ6ZN32 361 aa14□□□□□ -0.17
KRT28-201ENST00000306658 TMED6Q8WW62 240 aa14□□□□□ -0.17
KRT28-201ENST00000306658 E7EUB6 86 aa13.99□□□□□ -0.17
KRT28-201ENST00000306658 FBXO24O75426 580 aa13.99□□□□□ -0.17
KRT28-201ENST00000306658 CA2P00918 260 aa13.99□□□□□ -0.17
KRT28-201ENST00000306658 FAM120AOSQ5T036 256 aa13.99□□□□□ -0.17
KRT28-201ENST00000306658 HSD17B11Q8NBQ5 300 aa13.99□□□□□ -0.17
KRT28-201ENST00000306658 SLC25A32Q9H2D1 315 aa13.99□□□□□ -0.17
KRT28-201ENST00000306658 PDZD2O15018 2839 aa13.99□□□□□ -0.17
KRT28-201ENST00000306658 ABCA1O95477 2261 aa13.98□□□□□ -0.17
KRT28-201ENST00000306658 CGB1A6NKQ9 187 aa13.98□□□□□ -0.17
KRT28-201ENST00000306658 FCN1O00602 326 aa13.98□□□□□ -0.17
KRT28-201ENST00000306658 CNIH1O95406 144 aa13.98□□□□□ -0.17
KRT28-201ENST00000306658 FBP1P09467 338 aa13.98□□□□□ -0.17
KRT28-201ENST00000306658 SEC11BP0C7V7 166 aa13.98□□□□□ -0.17
KRT28-201ENST00000306658 SUB1P53999 127 aaKnown RBP eCLIP13.98□□□□□ -0.17
KRT28-201ENST00000306658 C2orf83Q53S99 150 aa13.98□□□□□ -0.17
KRT28-201ENST00000306658 CLLU1Q5K131 121 aa13.98□□□□□ -0.17
KRT28-201ENST00000306658 SCGB1C1Q8TD33 95 aa13.98□□□□□ -0.17
KRT28-201ENST00000306658 GNPNAT1Q96EK6 184 aaPredicted RBP13.98□□□□□ -0.17
KRT28-201ENST00000306658 TMEM147Q9BVK8 224 aa13.98□□□□□ -0.17
KRT28-201ENST00000306658 GGACTQ9BVM4 153 aa13.98□□□□□ -0.17
KRT28-201ENST00000306658 OR13C7P0DN81 318 aa13.98□□□□□ -0.17
KRT28-201ENST00000306658 BSXQ3C1V8 233 aa13.98□□□□□ -0.17
KRT28-201ENST00000306658 FBLN7Q53RD9 439 aa13.98□□□□□ -0.17
KRT28-201ENST00000306658 CSPG4Q6UVK1 2322 aa13.98□□□□□ -0.17
KRT28-201ENST00000306658 HSD17B13Q7Z5P4 300 aaPredicted RBP13.98□□□□□ -0.17
KRT28-201ENST00000306658 LRRC20Q8TCA0 184 aa13.98□□□□□ -0.17
KRT28-201ENST00000306658 TMEM170AQ8WVE7 144 aa13.98□□□□□ -0.17
KRT28-201ENST00000306658 PARD6GQ9BYG4 376 aaPredicted RBP13.98□□□□□ -0.17
KRT28-201ENST00000306658 UQCC1Q9NVA1 299 aa13.98□□□□□ -0.17
KRT28-201ENST00000306658 SPP1P10451 314 aa13.97□□□□□ -0.17
KRT28-201ENST00000306658 WT1-ASQ06250 92 aa13.97□□□□□ -0.17
KRT28-201ENST00000306658 FAM74A1Q5RGS3 127 aa13.97□□□□□ -0.17
KRT28-201ENST00000306658 NANPQ8TBE9 248 aa13.97□□□□□ -0.17
KRT28-201ENST00000306658 RNF141Q8WVD5 230 aa13.97□□□□□ -0.17
KRT28-201ENST00000306658 SRSF12Q8WXF0 261 aaKnown RBP13.97□□□□□ -0.17
KRT28-201ENST00000306658 SRSF8Q9BRL6 282 aaKnown RBP13.97□□□□□ -0.17
KRT28-201ENST00000306658 A0A1B0GW64 132 aa13.96□□□□□ -0.17
KRT28-201ENST00000306658 RNASE2P10153 161 aaKnown RBP13.96□□□□□ -0.17
KRT28-201ENST00000306658 LRRC75BQ2VPJ9 315 aa13.96□□□□□ -0.17
KRT28-201ENST00000306658 ZNF562Q6V9R5 426 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms