RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 CADM3Q8N126 398 aa7.1□□□□□ -1.27
PCDHB1-201ENST00000306549 SFRP2Q96HF1 295 aa7.1□□□□□ -1.27
PCDHB1-201ENST00000306549 NEU1Q99519 415 aa7.1□□□□□ -1.27
PCDHB1-201ENST00000306549 VDAC2P45880 294 aaPredicted RBP7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 LEMD1Q68G75 181 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 IGLV1-36A0A0B4J1U3 117 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 VSIG10L2P0DP72 767 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 PIGYQ3MUY2 71 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 IBA57Q5T440 356 aaKnown RBP7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 ZIC4Q8N9L1 334 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 CLDND2Q8NHS1 167 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 C1QTNF5Q9BXJ0 243 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 TMEM106BQ9NUM4 274 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 KCNE5Q9UJ90 142 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 IGHV3-72A0A0B4J1Y9 119 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 DLK1P80370 383 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 OR4D11Q8NGI4 311 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 OR51G1Q8NGK1 321 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 FLVCR1-AS1Q8TAF5 88 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 LHFPL6Q9Y693 200 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 A0A1W2PPE3 182 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 HLA-DQA1P01909 254 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 PAX1P15863 534 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 FAM3BP58499 235 aaPredicted RBP7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 FXYD3Q14802 87 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 H1FOOQ8IZA3 346 aaPredicted RBP7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 MTURNQ8N3F0 131 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 SRXN1Q9BYN0 137 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 WNT5BQ9H1J7 359 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 PLSCR4Q9NRQ2 329 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 EWSR1Q01844 656 aaKnown RBP eCLIP7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 OR10AG1Q8NH19 301 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 LINC01587Q99440 93 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 CALYQ9NYX4 217 aa7.09□□□□□ -1.27
PCDHB1-201ENST00000306549 TRBV7-9A0A0J9YWB2 115 aa7.09□□□□□ -1.28
PCDHB1-201ENST00000306549 ANKRD20A5PA0PJZ0 165 aa7.09□□□□□ -1.28
PCDHB1-201ENST00000306549 DNAJC4Q9NNZ3 241 aa7.09□□□□□ -1.28
PCDHB1-201ENST00000306549 ST6GALNAC2Q9UJ37 374 aa7.09□□□□□ -1.28
PCDHB1-201ENST00000306549 H0Y980 276 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 MVDP53602 400 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 CD69Q07108 199 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 DTX1Q86Y01 620 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 C10orf126Q8N4M7 172 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 ARL6IP6Q8N6S5 226 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 BMPERQ8N8U9 685 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 FUT9Q9Y231 359 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 IGHV2OR16-5A0A0B4J2B6 119 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 DIRC3C9JPN6 131 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 PLAUP00749 431 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 TGFAP01135 160 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 OVCH2Q7RTZ1 564 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 HOGA1Q86XE5 327 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 C8orf46Q8TAG6 207 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 PRSS22Q9GZN4 317 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 ABCA2Q9BZC7 2435 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 SOCS1O15524 211 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 PMCHL1Q16048 86 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 GVQW1Q8N7I0 195 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 GTF3AQ92664 365 aaKnown RBP7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 RCC2Q9P258 522 aaKnown RBP7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 PIEZO2Q9H5I5 2752 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 MBD3L4A6NDZ8 208 aaPredicted RBP7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 MBD3L3A6NE82 208 aaPredicted RBP7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 MBD3L5A6NJ08 208 aaPredicted RBP7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 CECR9P0C854 216 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 SLC25A16P16260 332 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 OR13A1Q8NGR1 328 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 MBD3L2Q8NHZ7 208 aaPredicted RBP7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 RHOVQ96L33 236 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 NKX2-6A6NCS4 301 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 PSCAO43653 123 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 SMIM18P0DKX4 95 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 MRPL32Q9BYC8 188 aaKnown RBP7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 SDF2L1Q9HCN8 221 aa7.08□□□□□ -1.28
PCDHB1-201ENST00000306549 IGKV3-20P01619 116 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 SSTR5P35346 364 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 TMEM177Q53S58 311 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 OOSP1A8MZH6 123 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 RND2P52198 227 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 HAPLN4Q86UW8 402 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 PMCHL2Q9BQD1 86 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 OR5AC2Q9NZP5 309 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 DPM3Q9P2X0 92 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 TNFSF18Q9UNG2 199 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 TRAV39A0A0B4J263 110 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 C9JCJ5 164 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 CD5P06127 495 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 UCP3P55916 312 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 C10orf111Q8N326 155 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 TRAV20A0A0B4J274 112 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 PROB1E7EW31 1015 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 C1orf100Q5SVJ3 147 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 ATP1A1-AS1Q5TC04 95 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 PNKDQ8N490 385 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 C7orf69Q9H7B7 122 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 LINC00312Q9Y6C7 94 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 SEC11BP0C7V7 166 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 MDS2Q8NDY4 140 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 OR5P3Q8WZ94 311 aa7.07□□□□□ -1.28
PCDHB1-201ENST00000306549 TRAV8-7A0A075B6U6 113 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms