RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 DPM3Q9P2X0 92 aa11.75□□□□□ -0.53
SHCBP1-201ENST00000303383 HILPDAQ9Y5L2 63 aa11.75□□□□□ -0.53
SHCBP1-201ENST00000303383 TET2Q6N021 2002 aaPredicted RBP11.75□□□□□ -0.53
SHCBP1-201ENST00000303383 OVOL3O00110 214 aa11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 GATCO43716 136 aaKnown RBP11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 PRTN3P24158 256 aa11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 ATP5J2P56134 94 aa11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 KLRD1Q13241 179 aa11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 PDLIM3Q53GG5 364 aaPredicted RBP11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 PUSL1Q8N0Z8 303 aaKnown RBP11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 CBY1Q9Y3M2 126 aa11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 FLNCQ14315 2725 aa11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 A1L4Q6 167 aa11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 IGHV4-39P01824 125 aa11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 HBE1P02100 147 aa11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 DPPA3Q6W0C5 159 aa11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 Q8N7P7 452 aa11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 PIMREGQ9BSJ6 248 aa11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 PARD6GQ9BYG4 376 aaPredicted RBP11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 PMS2P5A8MQ11 134 aa11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 RNASEK-C17orf49H0YIS7 233 aa11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 CA2P00918 260 aa11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 PEA15Q15121 130 aa11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 CLEC2AQ6UVW9 174 aa11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 CLDND2Q8NHS1 167 aa11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 TMEM167AQ8TBQ9 72 aa11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 FAM168AQ92567 244 aa11.74□□□□□ -0.53
SHCBP1-201ENST00000303383 TMEM218A2RU14 115 aa11.73□□□□□ -0.53
SHCBP1-201ENST00000303383 A0A1W2PN81 502 aa11.73□□□□□ -0.53
SHCBP1-201ENST00000303383 CHRNA7P36544 502 aa11.73□□□□□ -0.53
SHCBP1-201ENST00000303383 DVL1P1P54792 670 aaPredicted RBP11.73□□□□□ -0.53
SHCBP1-201ENST00000303383 GUK1Q16774 197 aa11.73□□□□□ -0.53
SHCBP1-201ENST00000303383 TMEM95Q3KNT9 176 aa11.73□□□□□ -0.53
SHCBP1-201ENST00000303383 VMO1Q7Z5L0 202 aa11.73□□□□□ -0.53
SHCBP1-201ENST00000303383 LPAR2Q9HBW0 351 aa11.73□□□□□ -0.53
SHCBP1-201ENST00000303383 ZFP36P26651 326 aaKnown RBP11.73□□□□□ -0.53
SHCBP1-201ENST00000303383 SRSF3P84103 164 aaKnown RBP11.73□□□□□ -0.53
SHCBP1-201ENST00000303383 MRPL41Q8IXM3 137 aaKnown RBP11.73□□□□□ -0.53
SHCBP1-201ENST00000303383 TIMM9Q9Y5J7 89 aa11.73□□□□□ -0.53
SHCBP1-201ENST00000303383 KPTNQ9Y664 436 aa11.73□□□□□ -0.53
SHCBP1-201ENST00000303383 BTBD17A6NE02 478 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 FOXH1O75593 365 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 HES1Q14469 280 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 TMEM41BQ5BJD5 291 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 FFAR4Q5NUL3 377 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 TPTE2P1Q5T6R2 138 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 GGACTQ9BVM4 153 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 ZNF430Q9H8G1 570 aaPredicted RBP11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 RPRMQ9NS64 109 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 MBP02144 154 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 GNB1P62873 340 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 LCN15Q6UWW0 184 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 OR11H6Q8NGC7 330 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 NPCDR1Q9BY65 106 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 SLC39A9Q9NUM3 307 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 SNAPINO95295 136 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 IL6RP08887 468 aaPredicted RBP11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 PPT1P50897 306 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 DLK1P80370 383 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 RAB31Q13636 194 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 TNXAQ16473 311 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 C1orf122Q6ZSJ8 110 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 MMD2Q8IY49 270 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 KIR3DL3Q8N743 410 aa11.72□□□□□ -0.53
SHCBP1-201ENST00000303383 TIMM23O14925 209 aa11.71□□□□□ -0.53
SHCBP1-201ENST00000303383 TOX4O94842 621 aa11.71□□□□□ -0.53
SHCBP1-201ENST00000303383 OR10W1Q8NGF6 305 aa11.71□□□□□ -0.53
SHCBP1-201ENST00000303383 LYPD6BQ8NI32 183 aa11.71□□□□□ -0.53
SHCBP1-201ENST00000303383 METTL1Q9UBP6 276 aaKnown RBP11.71□□□□□ -0.53
SHCBP1-201ENST00000303383 DCHS2Q6V1P9 2916 aa11.71□□□□□ -0.54
SHCBP1-201ENST00000303383 SUB1P53999 127 aaKnown RBP eCLIP11.71□□□□□ -0.54
SHCBP1-201ENST00000303383 TEX45Q8NA69 505 aa11.71□□□□□ -0.54
SHCBP1-201ENST00000303383 NPVFQ9HCQ7 196 aa11.71□□□□□ -0.54
SHCBP1-201ENST00000303383 MPDU1O75352 247 aa11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 SSX2Q16385 188 aa11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 PERPQ96FX8 193 aa11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 VSIRQ9H7M9 311 aa11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 COL12A1Q99715 3063 aa11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 LRRK2Q5S007 2527 aa11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 IGHV2-70DA0A0C4DH43 119 aa11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 IGLV2-23P01705 113 aa11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 RPL35P42766 123 aaKnown RBP11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 C10orf55Q5SWW7 151 aa11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 ZNF787Q6DD87 383 aa11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 CCDC144NLQ6NUI1 221 aa11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 RITA1Q96K30 269 aa11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 SAV1Q9H4B6 383 aaPredicted RBP11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 KIAA1456Q9P272 454 aa11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 SFTA3P0C7M3 94 aa11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 OR13C7P0DN81 318 aa11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 ATP5IP56385 69 aaPredicted RBP11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 COTL1Q14019 142 aa11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 MMDQ15546 238 aa11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 SP5Q6BEB4 398 aaPredicted RBP11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 LHFPL4Q7Z7J7 247 aa11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 NDUFA4L2Q9NRX3 87 aa11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 WDR83OSQ9Y284 106 aa11.7□□□□□ -0.54
SHCBP1-201ENST00000303383 AKR1D1P51857 326 aa11.69□□□□□ -0.54
SHCBP1-201ENST00000303383 HAGHQ16775 308 aa11.69□□□□□ -0.54
SHCBP1-201ENST00000303383 VWC2Q2TAL6 325 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms