RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 LHFPL4Q7Z7J7 247 aa17.93■□□□□ 0.46
SMAD1-201ENST00000302085 IGHV2-70DA0A0C4DH43 119 aa17.92■□□□□ 0.46
SMAD1-201ENST00000302085 A0A1W2PRD5 423 aa17.92■□□□□ 0.46
SMAD1-201ENST00000302085 A0A1W2PRF3 423 aa17.92■□□□□ 0.46
SMAD1-201ENST00000302085 A0A1W2PRM7 423 aa17.92■□□□□ 0.46
SMAD1-201ENST00000302085 FAM157AC9JC47 383 aa17.92■□□□□ 0.46
SMAD1-201ENST00000302085 PSG5Q15238 335 aa17.92■□□□□ 0.46
SMAD1-201ENST00000302085 BSXQ3C1V8 233 aa17.92■□□□□ 0.46
SMAD1-201ENST00000302085 C10orf55Q5SWW7 151 aa17.92■□□□□ 0.46
SMAD1-201ENST00000302085 LFNGQ8NES3 379 aa17.92■□□□□ 0.46
SMAD1-201ENST00000302085 A0A1B0GW64 132 aa17.91■□□□□ 0.46
SMAD1-201ENST00000302085 C10orf91Q5T1B1 145 aa17.91■□□□□ 0.46
SMAD1-201ENST00000302085 TREML4Q6UXN2 200 aa17.91■□□□□ 0.46
SMAD1-201ENST00000302085 HILPDAQ9Y5L2 63 aa17.91■□□□□ 0.46
SMAD1-201ENST00000302085 SMCO3A2RU48 225 aa17.91■□□□□ 0.46
SMAD1-201ENST00000302085 INS-IGF2F8WCM5 200 aa17.91■□□□□ 0.46
SMAD1-201ENST00000302085 TIMM23O14925 209 aa17.91■□□□□ 0.46
SMAD1-201ENST00000302085 IGKV1D-33P01593 117 aa17.91■□□□□ 0.46
SMAD1-201ENST00000302085 IGKV1-33P01594 117 aa17.91■□□□□ 0.46
SMAD1-201ENST00000302085 RNASE2P10153 161 aaKnown RBP17.91■□□□□ 0.46
SMAD1-201ENST00000302085 RAB2AP61019 212 aa17.91■□□□□ 0.46
SMAD1-201ENST00000302085 C2orf83Q53S99 150 aa17.91■□□□□ 0.46
SMAD1-201ENST00000302085 SSX7Q7RTT5 188 aa17.91■□□□□ 0.46
SMAD1-201ENST00000302085 C1orf159Q96HA4 380 aa17.91■□□□□ 0.46
SMAD1-201ENST00000302085 TRAV1-1A0A0B4J248 108 aa17.9■□□□□ 0.46
SMAD1-201ENST00000302085 BTBD17A6NE02 478 aa17.9■□□□□ 0.46
SMAD1-201ENST00000302085 HOXB4P17483 251 aaPredicted RBP17.9■□□□□ 0.46
SMAD1-201ENST00000302085 PRSS8Q16651 343 aa17.9■□□□□ 0.46
SMAD1-201ENST00000302085 ARSJQ5FYB0 599 aaPredicted RBP17.9■□□□□ 0.46
SMAD1-201ENST00000302085 ZNF709Q8N972 641 aa17.9■□□□□ 0.46
SMAD1-201ENST00000302085 MBD3L1Q8WWY6 194 aa17.9■□□□□ 0.46
SMAD1-201ENST00000302085 RCC1LQ96I51 464 aaKnown RBP17.9■□□□□ 0.46
SMAD1-201ENST00000302085 MED13LQ71F56 2210 aa17.9■□□□□ 0.46
SMAD1-201ENST00000302085 CEACAM3P40198 252 aa17.9■□□□□ 0.46
SMAD1-201ENST00000302085 ATP5IP56385 69 aaPredicted RBP17.9■□□□□ 0.46
SMAD1-201ENST00000302085 PEA15Q15121 130 aa17.9■□□□□ 0.46
SMAD1-201ENST00000302085 EIF5A2Q9GZV4 153 aaKnown RBP17.9■□□□□ 0.46
SMAD1-201ENST00000302085 SIGLEC9Q9Y336 463 aa17.9■□□□□ 0.46
SMAD1-201ENST00000302085 F8W036 122 aa17.89■□□□□ 0.45
SMAD1-201ENST00000302085 VENTXO95231 258 aa17.89■□□□□ 0.45
SMAD1-201ENST00000302085 FFAR4Q5NUL3 377 aa17.89■□□□□ 0.45
SMAD1-201ENST00000302085 RPP25LQ8N5L8 163 aaKnown RBP17.89■□□□□ 0.45
SMAD1-201ENST00000302085 CFHR4Q92496 578 aa17.89■□□□□ 0.45
SMAD1-201ENST00000302085 FAM168AQ92567 244 aa17.89■□□□□ 0.45
SMAD1-201ENST00000302085 RNF5Q99942 180 aa17.89■□□□□ 0.45
SMAD1-201ENST00000302085 A0A1W2PN81 502 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 C17orf112F2Z3M2 114 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 HBE1P02100 147 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 SFTA3P0C7M3 94 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 PAX6P26367 422 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 CHRNA7P36544 502 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 ATP5J2P56134 94 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 DEFA5Q01523 94 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 WT1-ASQ06250 92 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 ATRAIDQ6UW56 229 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 C10orf105Q8TEF2 133 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 RARRES2Q99969 163 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 NPVFQ9HCQ7 196 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 MPDU1O75352 247 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 ERHP84090 104 aaKnown RBP17.88■□□□□ 0.45
SMAD1-201ENST00000302085 LCN15Q6UWW0 184 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 MMD2Q8IY49 270 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 TBX15Q96SF7 602 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 MGST2Q99735 147 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 PIMREGQ9BSJ6 248 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 PBDC1Q9BVG4 233 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 SEC11CQ9BY50 192 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 KIAA1456Q9P272 454 aa17.88■□□□□ 0.45
SMAD1-201ENST00000302085 METTL1Q9UBP6 276 aaKnown RBP17.88■□□□□ 0.45
SMAD1-201ENST00000302085 CARHSP1Q9Y2V2 147 aaKnown RBP17.88■□□□□ 0.45
SMAD1-201ENST00000302085 LSM4Q9Y4Z0 139 aaKnown RBP17.88■□□□□ 0.45
SMAD1-201ENST00000302085 VWC2LB2RUY7 222 aa17.87■□□□□ 0.45
SMAD1-201ENST00000302085 FOXH1O75593 365 aa17.87■□□□□ 0.45
SMAD1-201ENST00000302085 TOX4O94842 621 aa17.87■□□□□ 0.45
SMAD1-201ENST00000302085 HABP2Q14520 560 aaPredicted RBP17.87■□□□□ 0.45
SMAD1-201ENST00000302085 RBFOX3A6NFN3 312 aa17.86■□□□□ 0.45
SMAD1-201ENST00000302085 COX6B1P14854 86 aa17.86■□□□□ 0.45
SMAD1-201ENST00000302085 DYNAPQ8N1N2 210 aa17.86■□□□□ 0.45
SMAD1-201ENST00000302085 C17orf50Q8WW18 174 aa17.86■□□□□ 0.45
SMAD1-201ENST00000302085 NRGNQ92686 78 aa17.86■□□□□ 0.45
SMAD1-201ENST00000302085 COL12A1Q99715 3063 aa17.86■□□□□ 0.45
SMAD1-201ENST00000302085 A1L4Q6 167 aa17.86■□□□□ 0.45
SMAD1-201ENST00000302085 EIF3GO75821 320 aaKnown RBP eCLIP17.86■□□□□ 0.45
SMAD1-201ENST00000302085 MBP02144 154 aa17.86■□□□□ 0.45
SMAD1-201ENST00000302085 GUCA2BQ16661 112 aa17.86■□□□□ 0.45
SMAD1-201ENST00000302085 OR10G4Q8NGN3 311 aa17.86■□□□□ 0.45
SMAD1-201ENST00000302085 OR10G9Q8NGN4 311 aa17.86■□□□□ 0.45
SMAD1-201ENST00000302085 OR10G7Q8NGN6 311 aa17.86■□□□□ 0.45
SMAD1-201ENST00000302085 FBXL15Q9H469 300 aa17.86■□□□□ 0.45
SMAD1-201ENST00000302085 IGHV4-61A0A0C4DH41 118 aa17.85■□□□□ 0.45
SMAD1-201ENST00000302085 FNDC10F2Z333 226 aa17.85■□□□□ 0.45
SMAD1-201ENST00000302085 FGF8P55075 233 aaPredicted RBP17.85■□□□□ 0.45
SMAD1-201ENST00000302085 SSX2Q16385 188 aa17.85■□□□□ 0.45
SMAD1-201ENST00000302085 TNXAQ16473 311 aa17.85■□□□□ 0.45
SMAD1-201ENST00000302085 MLANAQ16655 118 aa17.85■□□□□ 0.45
SMAD1-201ENST00000302085 POLR3KQ9Y2Y1 108 aaPredicted RBP17.85■□□□□ 0.45
SMAD1-201ENST00000302085 PLXNB1O43157 2135 aa17.85■□□□□ 0.45
SMAD1-201ENST00000302085 OR13C7P0DN81 318 aa17.84■□□□□ 0.45
SMAD1-201ENST00000302085 MAS1LP35410 378 aa17.84■□□□□ 0.45
SMAD1-201ENST00000302085 OPRK1P41145 380 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms